Sus scrofa (pig): 100511786
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Entry
100511786 CDS
T01009
Symbol
RAPGEF4
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 4
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04015
Rap1 signaling pathway
ssc04024
cAMP signaling pathway
ssc04072
Phospholipase D signaling pathway
ssc04081
Hormone signaling
ssc04261
Adrenergic signaling in cardiomyocytes
ssc04670
Leukocyte transendothelial migration
ssc04911
Insulin secretion
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100511786 (RAPGEF4)
04072 Phospholipase D signaling pathway
100511786 (RAPGEF4)
04024 cAMP signaling pathway
100511786 (RAPGEF4)
09133 Signaling molecules and interaction
04081 Hormone signaling
100511786 (RAPGEF4)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100511786 (RAPGEF4)
09152 Endocrine system
04911 Insulin secretion
100511786 (RAPGEF4)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
100511786 (RAPGEF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100511786 (RAPGEF4)
Membrane trafficking [BR:
ssc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
100511786 (RAPGEF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
Motif
Other DBs
NCBI-GeneID:
100511786
NCBI-ProteinID:
XP_020930856
Ensembl:
ENSSSCG00000015959
LinkDB
All DBs
Position
15:78773270..79094490
Genome browser
AA seq
993 aa
AA seq
DB search
MVAAHAAHSSSSAEWIACLDKRPLERSSEDVDIIFTRLKEVKAFEKFHPNLLHQICLCGY
YENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGESILDN
TPRHATIVTRESSELLRIEQKDFKALWEKYRQYMAGLLAPPYGVMETGSNNDRLPDKENV
PSEKILRAGKILRNAILSRAPHMIRDRKYHLKTYRQCCVGTELVDWMLQQTPCVHSRTQA
VGMWQVLVEDGVLNHVDQEHHFQDKYLFYRFLDDEHEDAPLPTEEEKKECDEELQDTLLL
LSQMGPDAHMRMILRKPPGQRTVDDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHA
KGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASXVL
REDNCHFLRVDKEDFNRILRDVEANTVRLKEHDQDVLVLEKVPAGNRASNQGNSQPQQKY
TVMSGTPEKILEHFLETIRLEPALNEATESVLNDFVMMHCVFMPNTQLCPALMAHYHAQP
SQGTEQEKMDYALNNKRRVIRLVLQWAAMYGDVLQEDDVAMAFLEEFYVSVSDDARMIAA
LKEQLPELEKTVKQISEDAKAPQKKHKVLLQQFNTGDERSQKRQPIRGSDEVLFKVYCMD
HTYTTIRVPVAASVKEVLSAVADKLGSGEGLIIVKMSSGGEKVVLKPNDVSVFTTLTING
RLFACPREQFDSLTPLPEQEGPTVGTVGTFELMSSKDLAYQMTIYDWELFNCVHELELIY
HTFGRHHFKKTTANLDLFLRRFNEIQFWVVTEICLCSQPSKRVQLLKKFIKIAAHCKEYK
NLNSFFAIVMGLSNVAVSRLALTWEKLPSKFKKFYAEFESLMDPSRNHRAYRLTVAKLDP
PLIPFMPLLIKDMTFTHEGNKTFIDSLVNFEKMRMIANTARTVRYCRSQPFNPDAAQANK
NHQDVRSYVRQLNVIDNQRTLSQMSHRLEPRRP
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctgcgcacgctgcccattcttcctcctccgccgagtggatcgcctgcctggat
aaaagaccgttggaacgatccagtgaagatgtggatataatcttcaccaggctgaaagaa
gttaaagcttttgagaaatttcacccaaatctccttcatcagatttgtttatgtggttat
tatgagaacctggaaaaaggaataacattatttcgccagggtgatatcggaaccaactgg
tatgctgtcctggcagggtctttggatgttaaagtttctgagaccagcagtcaccaggat
gcagtgaccatctgtactctgggaattgggacagcctttggagagtccattctggacaac
acaccccgccatgcgaccatcgttaccagggagagcagtgagctgcttcgcatcgagcag
aaggacttcaaggcactatgggagaaatatcgacagtacatggcaggacttctggctcct
ccttatggcgttatggaaacgggctctaacaatgacaggcttcctgacaaggagaacgtt
ccttcagagaagatcctcagggctggaaaaattctacgaaatgccattctctctcgagca
cctcacatgataagagatagaaaataccacctaaagacatacagacaatgctgcgtgggg
accgagctggtggactggatgctgcagcagactccgtgtgttcactctcgaactcaagct
gtcggcatgtggcaggtcctagtagaagacggagttctcaaccacgtggaccaggagcat
cacttccaagataaatatttattttatcgatttctggatgacgagcatgaggatgcccct
ttgcccacggaggaggagaagaaagagtgtgacgaggagctgcaggacaccctgctgctg
ctgtcgcagatgggccccgatgcccacatgaggatgatcctccgcaaaccacctggccag
aggactgtggatgacctagaaattatctatgaagaactccttcacattaaagccttatcc
catctttcaaccaccgtgaaacgggagttagcaggtgttctcatttttgagtctcatgcc
aaaggaggcactgtgttgtttaaccagggggaagaaggaacctcctggtacattattcta
aaaggatcagtgaatgtagtcatttatggcaagggtgtggtctgtaccctgcacgagggc
gatgactttggcaagttagccctggtgaacgatgccccaagagctgcctccnatgtcttg
cgagaagataactgccatttcctaagagtagacaaggaggatttcaaccggatcctgagg
gacgtggaggcgaatacagtcagacttaaagaacacgaccaagacgtcttggtgctggag
aaggtcccagcagggaacagggcttctaatcaaggaaactcacagcctcagcaaaagtat
actgtgatgtcaggaacacctgaaaaaattttagagcattttctagaaacgatacgcctt
gagccagctttaaatgaagcaacagagtctgtcttaaacgactttgttatgatgcactgt
gtttttatgccaaatacccagctctgcccagctctgatggcccattaccacgcacagcct
tcacaaggtacagaacaagagaaaatggattacgccctcaacaataagaggcgagtcatc
cgcctggtcttgcagtgggctgccatgtatggagatgtcctacaagaggatgatgtggcc
atggctttcctggaggagttttatgtgtctgtatcagatgacgcccggatgattgctgcc
ctcaaggagcaactgcccgagttggagaagactgtcaagcaaatttcagaagatgcaaag
gctccacaaaagaagcacaaagttcttttgcaacagttcaacacaggtgatgaaagatcc
cagaagcgccagcccatccgcggctctgatgaagtgctgtttaaagtctattgcatggac
cacacctacacaaccatccgggtgcccgtggccgcctcggtgaaggaagtcctcagcgca
gttgccgacaaactcggctctggggaaggcctgatcatcgtcaagatgagttctggagga
gaaaaggtggtgctcaaacctaatgatgtttcagtatttacgacgctcaccattaatgga
cgcctgtttgcttgcccgcgagagcaattcgattcactgactcccttgccagaacaggag
ggcccaactgttggaacagtgggaacttttgaactgatgagctccaaagatctggcatac
cagatgacaatttatgattgggaactcttcaactgtgtgcacgagctggaactaatctat
cacacatttggaaggcatcattttaaaaagaccacagcgaacttggatttgttcctgagg
aggtttaatgaaattcagttttgggttgtcactgagatttgcctttgttcccagcccagc
aagcgtgttcagctcttaaaaaaattcattaagatagcggcccactgtaaggagtacaaa
aatctgaattccttttttgccatcgtcatgggactaagtaatgttgctgtgagccgcttg
gcactaacgtgggagaaactgccaagcaagttcaagaagttctatgcggagtttgaaagt
ttaatggatccttcaagaaaccacagggcctacaggctgacagtagccaagctggaccct
cctctcatccccttcatgcctttgctcattaaagatatgacatttactcatgaggggaac
aagacgttcattgacagtctagtaaactttgaaaaaatgcgcatgattgcaaatactgcc
agaacggtgagatactgcaggagccagcctttcaatcctgatgcagctcaagctaacaag
aaccatcaggatgtccggagttatgtacggcaattaaatgtgattgacaaccagagaact
ttatcacagatgtcacacagattagagcctcgtcgaccatag
DBGET
integrated database retrieval system
