Sus scrofa (pig): 100512046
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Entry
100512046 CDS
T01009
Symbol
EFEMP1
Name
(RefSeq) EGF-containing fibulin-like extracellular matrix protein 1 precursor
KO
K18262
EGF-containing fibulin-like extracellular matrix protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssc04147
]
100512046 (EFEMP1)
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100512046 (EFEMP1)
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100512046 (EFEMP1)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
100512046 (EFEMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF_3
hEGF
EGF
Plasmod_Pvs28
stn_TNFRSF12A
Motif
Other DBs
NCBI-GeneID:
100512046
NCBI-ProteinID:
NP_001231190
Ensembl:
ENSSSCG00000008397
UniProt:
A0A480STR6
F8SIP2
LinkDB
All DBs
Position
3:85407677..85473251
Genome browser
AA seq
498 aa
AA seq
DB search
MLKVLFLTMLTLALVKSQDTEETITYTQCTDGYEWDPVRQQCKDIDECDIVPDACKGGMK
CVNHYGGYLCLPKTAQIIVNNEQPQQETPAAEGVGAAANAAAASGAGTGGVAASGMATSA
VVPGGGFVASAAAEVQTSRNNFVIRRNPADPQRIPSNPSHRIQCATGYEQSEHNVCQDID
ECTAGTHSCRADQVCINLRGSFTCQCPPGYQKRGEQCVDVDECSIPPYCHQRCVNTPGSF
YCQCSPGFQLAANNYTCVDINECDASNQCAQQCYNILGSFICQCNQGYELSSDRLNCEDI
DECRTSSYLCQYQCVNEPGKFSCMCPQGYQVVRSRTCQDINECETTNECREDEMCWNYHG
GFRCYPRNPCQDPYVLTSENRCVCPVSNAMCRELPQSIVYKYMSIRSDRSVPSDIFQIQA
TTIYANTINTFRIKSGNENGEFYLRQTSPVSAMLVLVKSLSGPREYIVDLEMLTVNSIGT
FRTSSVLRLTIIVGPFSF
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaagtccttttcctaactatgctgactctggcgttggtcaagtcacaggacacc
gaagaaaccatcacatacacgcaatgcacagatggatatgagtgggatcctgtaagacag
cagtgcaaagatattgatgaatgtgacattgtcccagatgcttgcaaaggtggaatgaaa
tgcgtcaaccactatggaggatacctctgccttcctaaaacagcccagattattgtcaac
aatgaacaacctcagcaagaaacaccagcagctgaaggtgtgggtgcagctgcaaatgca
gctgcagcctcaggtgcaggcactggaggagtagcagccagtggcatggcaaccagtgca
gtggtgccagggggtggttttgtcgccagtgctgctgctgaagttcagactagccggaat
aactttgtcatccggcggaacccagctgaccctcagcgcattccctccaacccttctcac
cggatccagtgtgcaacaggctatgagcagagtgagcacaacgtgtgccaagacatagat
gaatgcactgcagggacacacagctgtagagctgaccaagtgtgcatcaatttacgaggt
tccttcacctgtcagtgccctcccggctatcagaagcgaggagagcagtgtgtagatgta
gatgaatgcagcatccctccatattgccaccaaaggtgcgtgaacacaccaggatcattt
tattgccagtgcagccctgggtttcagttggcagcaaacaactatacctgtgtagacata
aatgaatgtgatgccagcaatcaatgtgctcagcaatgctacaacattctcggttcattc
atctgtcagtgcaatcaaggatatgagctaagcagtgataggctcaactgtgaagacatt
gatgaatgcagaacctcaagctacctgtgtcaatatcaatgtgtcaatgaacctgggaaa
ttctcatgtatgtgcccccagggataccaagtggtgagaagtagaacatgtcaggatata
aatgagtgtgagaccacaaatgaatgtcgggaagatgaaatgtgttggaattatcacggc
ggcttccgttgttacccacgaaatccttgtcaagatccctacgtactaacatcagagaac
cggtgcgtttgcccagtctcaaatgcaatgtgccgagaacttccccaatccatagtctac
aaatacatgagcatccgatctgataggtctgtgccatcagacatcttccagatacaggcc
acaaccatttatgccaacactatcaatacttttcggattaaatctggaaatgaaaatgga
gagttctacctaagacaaacaagtcctgtaagtgcaatgcttgtgctggtgaagtcgtta
tcaggaccaagagaatatatagtggacctggagatgctgacagtcaacagtataggaacc
ttccgcactagctcagtgttaagattgacaataatagtggggccattttcattttag
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integrated database retrieval system
