KEGG   Sus scrofa (pig): 100512495
Entry
100512495         CDS       T01009                                 
Symbol
KDM6B
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 6B
  KO
K11448  lysine-specific demethylase 6B [EC:1.14.11.68]
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssc03036]
    100512495 (KDM6B)
Enzymes [BR:ssc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     100512495 (KDM6B)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100512495 (KDM6B)
SSDB
Motif
Pfam: JmjC KDM6_C-hel KDM6_GATAL TPR_2 TPR_1 TPR_14 SBP_bac_1 TPR_7
Other DBs
NCBI-GeneID: 100512495
NCBI-ProteinID: XP_020923492
Ensembl: ENSSSCG00000017962 ENSSSCG00000021404
LinkDB
Position
12:53087072..53108949
AA seq 1645 aa
MHRAVDPPGARTAREAFALGGLSCAGAWSSCPPHPPPRSAWLPGGRCSASIGQPPLSAPL
PPSHGSSSGHPNKLYFAPGTPNPRPLHGKLESLHGCVQALLREPAQPGLWEQLGQLYESE
HDSEEAIRCYHSALRYGGSLAELGPRIGRLQQAQLWNFHAGSCQHRPKVLPPLEQVWNLL
HLEHKRNYGAKRGGPPVKRAAEPPVVQPVPPAALSGPSGEEGLSPGGKRRRGCNSEQTGL
PPGLPLPPPPLPPPPPPPPPPPPPPPLPGLATSPPFQLTKPGLWSTLHGDAWGPERKGPA
PPERQEQRHSLPPHPYPYPAPAYPSHPPGHRLVPAAPPGPGPRPPGAESHGCPPATRPPG
SDLRESRVQRSRMDSSVSPAATTACVPYAPSRPPALPGTTTSSSSSSSNTGLRGVEPSPG
IPGADHYQTPALEVSSHQGRLGPSAHSSRKPFLAAPAATPHLSLPPGPPSPPPPPCPRLL
RPPPPPAWLKGPACRAAREDGEILEELFFGAEGRPRPPPPPXPHREGFLGPPAPRFSVGT
QDSHTPPTPPTTSSSSSNNGSHSSSPTGSVSFPPPPYLARSMDPLPRPPSPTLSPQDPPL
APLSLALPPAPPSSCHQNTSGSFRRPESPRPRVSFPKTPEVGPGPSPGPLNKAPQPVPSR
VGELPARGPRLFDFPPTPLEDQFEEPAEFKILPDGLANIMKMLDESIRKEEEQQQQEAGV
VPPPPLKEPFASLQPPFPTDTAPATTAATTAATTTATQEEEKKPPPALPPPPPLAKFPPP
PQPQPPPPPLPPPASPASLLKSLASVLEGQKYCYRGTGAAVATRPGPLPTTQYSPGPPSG
ATAPPPTSAAPSAQGSPQPSASSSSQFSTSGGPWARERRAGEEPAPGPTTPAPPPPPLPL
PPARSESEVLEEISRACETLVERVGRGATDPADPADTADPVDTGAERLLPPAQAKEEAGG
ASAVAAAAAGPGSSKRRQKEHQKEHRRHRRACKDSVGRRPREGRAKAKAKAPKEKSRRVL
GNLDLQSEEIQGREKARPDLGGASKAKPPTAPAPLPAPAPSTQSTPPSAPVPGKKAREEA
PGPPGVSRADMLKLRSLSEGPPKELKIRLIKVESGDKETFIASEVEERRLRMADLTISHC
AADVVRASKNAKVKGKFRESYLSPAQSVKPKINTEEKLPREKLNPPTPSIYLESKRDAFS
PVLLQFCTDPRNPITVIRGLAGSLRLNLGLFSTKTLVEASGEHTVEVRTQVQQPSDENWD
LTGTRQIWPCESSRSHTTIAKYAQYQASSFQESLQEEKESEDEESEEPDSTTETPPSSAP
DPKNHHIIKFGTNIDLSDAKRWKPQLQELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQL
YMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTGSWW
PILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQLALE
RYEWNEVKNVKSIVPMIHVSWNVARTVKISDPDLFKMIKFCLLQSMKHCQVQRESLVRAG
KKIAYQGRVKDEPAYYCNECDVEVFNILFVTSENGSRNTYLVHCEACARRRSAGLQGVVV
LEQYRTEELAQAYDAFTLAPASTSR
NT seq 4938 nt   +upstreamnt  +downstreamnt
atgcatcgggcagtggaccctccaggggcccgcactgcacgggaagcctttgcccttggg
ggcttgagctgtgctggggcctggagctcctgcccgccccacccccctcctcggagcgca
tggctgcctggaggcaggtgctctgccagcatcgggcagcccccactctctgctcccctc
cccccttcacacggcagtagctctgggcaccccaacaaactatattttgctccagggaca
cccaacccgagacccctccatgggaagctggaatccctgcatggctgtgtgcaggctttg
ctccgggagccagcccagccagggctgtgggagcagcttgggcagctgtacgagtcagag
cacgacagtgaggaggccattcgctgctaccacagcgcccttcgatatggaggaagcttg
gctgagctggggccccgtatcggccgattacagcaggcccagctctggaactttcatgcc
ggctcctgccagcaccgacccaaggtcctgccccccttggagcaagtgtggaacttgctg
caccttgagcacaagcggaactatggggccaaacgggggggtcccccagtgaagcgagcc
gctgaacccccagtggtgcagcccgtgcctcctgcagcactctcaggcccctcgggggag
gagggcctcagccccggaggcaagcgcaggaggggctgcaactcggagcagaccggcctt
cccccagggctgccgctgcctccaccaccgttaccacccccgccgcccccgccgccgccc
ccgccgccgcccccgcccctgcctggcctggccaccagccctccatttcagctgaccaag
ccagggctgtggagtaccttgcatggagatgcctggggccccgagcgcaagggtccagct
cccccagagcgtcaggagcagcggcactcgctgcctcctcacccatatccatacccagct
ccggcctacccctcgcacccccctggccaccggctggtcccggctgcacccccaggccca
ggcccccgccccccaggagcagagagccatggctgcccgcctgccacccgtccccccgga
agtgaccttagagagagcagagttcagaggtcgcggatggactccagcgtttcaccagca
gcaaccaccgcctgcgtgccttacgccccttcccggccccctgccctccccggcaccacc
accagcagcagtagcagcagcagcaacaccggtctccggggcgtggagccgagcccaggc
attcccggcgccgaccattaccagactcctgcgctggaggtctcctctcaccaaggccgc
ctggggccctcggcacacagtagtcggaaaccgttcctggcggctcctgctgccactccc
cacctgtccctgccccccggccccccctcacctcctccacccccctgtccccgcctctta
cgccccccgcccccccctgcctggctgaagggcccagcctgccgggcagcccgtgaggat
ggagagatcttagaggagctcttcttcggggccgagggacgcccccgccctcctccccca
cccnctccccaccgcgagggcttcttggggcctcccgccccccgcttttctgtgggcact
caggattcgcacacccctcccactcccccgaccaccagcagcagcagcagcaacaatggc
agccacagcagcagccctactgggtctgtgtccttccccccacctccctatctggccaga
agtatggacccccttcctcggccccccagcccaacactgagcccccaggatccgcctctt
gcacccctcagtcttgccctgcctccagcccctccctcctcttgccaccaaaatacctca
ggaagcttcaggcgcccggagagccctcggcccagggtctccttcccaaagacccccgag
gtggggccggggccatccccaggccccctgaataaagccccccagcctgtgccgtccagg
gttggggagctgcctgcccgaggccctcgactctttgatttcccccctaccccgctggag
gaccagtttgaggagccagctgaattcaagatcctacctgatgggctggccaacatcatg
aagatgctggacgaatccattcgcaaggaggaggagcagcaacaacaggaggctggcgtg
gtccccccgcctcccctgaaggagccctttgcatctctgcagcctccgttccccactgac
acagccccagccaccaccgctgccaccaccgctgccaccaccacggccacccaggaagag
gagaagaagccaccaccagccctgccaccaccgccgcctctagccaagttccctccgcca
ccccagccgcagccgccgccacccccgctacccccgccagccagcccagccagcctgctc
aaatccttggcctctgtgctggagggacagaagtactgttaccgggggactggagcagct
gttgccacccggcccgggcccttgcccaccactcagtattcccctggccccccatcaggt
gctaccgccccgccgcccacctcagcggccccaagcgcccagggctccccgcagccctcc
gcttcctcgtcatctcagttctctacctcaggcgggccctgggcccgggagcgcagggcg
ggtgaagagccagccccgggccccacgacccccgccccgccgcccccacccttgcctctg
ccccccgctcgctctgagtctgaggtgctagaagagataagtcgggcttgtgagaccctc
gtggagcgggtgggccggggtgccacagacccggcagacccagcggacacagcagaccca
gtggacactggggctgaacgactgctgcctccagctcaggccaaggaggaggcgggtggg
gcgtcggcggtggcagcagcggcagcaggaccaggtagcagcaagaggaggcagaaggag
caccagaaggagcaccggaggcacaggcgggcttgtaaggacagtgtgggtcggcggccc
cgagagggcagggccaaggccaaggccaaggcccccaaagaaaagagccgccgggtgctg
gggaacctggacctgcagagcgaggagatccagggtcgtgagaaggcccggcctgatctt
ggcggggcctccaaggccaagccacccaccgctccagcccctctgccagctcctgccccc
tccacccagtccacacccccgtccgcccccgttcccgggaagaaggctcgggaggaagct
ccagggccaccgggtgtcagccgggctgacatgctgaagctgcgctcacttagtgagggg
cctcctaaagagctgaagatccggctcatcaaggtggagagcggtgacaaggagaccttc
atcgcctcggaggtggaagagcggaggctgcggatggcggacctcaccatcagccactgc
gcggccgatgtcgtgcgggccagcaagaatgccaaggtgaaagggaagtttcgagagtcc
tacctttctcctgcccagtctgtgaaacccaagatcaacactgaggagaagctgccccgg
gaaaaactcaacccgcccacacccagcatctatctcgagagcaaacgggatgccttctca
ccggtgctgctgcagttctgtacagaccctcgaaatcccatcaccgtgatccggggcttg
gcgggctccctacggctcaacttgggcctcttctccaccaagacgctggtggaggcgagt
ggcgaacacacggtggaggtgcgcacccaggtgcagcagccctcagatgagaactgggac
ctgacgggcacccgacagatctggccctgtgagagctcccgttcccacaccaccattgcc
aagtacgcgcagtaccaggcttcctccttccaggagtccctgcaggaggagaaggagagt
gaagatgaggagtcggaggagccggacagcaccacagaaacccctcctagcagcgccccg
gacccgaagaaccatcacatcatcaagtttggcaccaacatcgacctgtccgatgccaag
cggtggaagccccagctgcaggagctgctgaagctgcccgccttcatgcgggtgacctcc
acgggcaacatgctgagccacgtgggccacaccatcctgggcatgaacaccgtgcagctg
tacatgaaggtccctggcagccgaacgccaggccatcaagagaacaacaacttctgctcg
gtcaacatcaacattggccccggcgactgcgagtggttcgcggtgcacgagcactactgg
gagactatcagcgccttctgcgaccggcacggcgtggattacttgacgggttcctggtgg
ccaatcctggatgacctctatgcttccaacatccctgtgtaccgcttcgtgcagcgccca
ggagaccttgtgtggatcaacgcggggaccgtgcactgggtgcaggccaccggctggtgc
aacaacattgcctggaacgtggggcccctcaccgcctatcagtaccagctggccctggaa
cgatacgagtggaacgaggtgaagaacgtcaaatccattgtgcccatgattcacgtgtcc
tggaacgtggctcgcacggtcaaaatcagcgaccccgacttgttcaagatgatcaagttc
tgcctcctgcagtcgatgaagcactgccaggtgcagcgggagagcctggtgcgggccggg
aagaaaatcgcctaccagggtcgggtcaaggacgagcccgcctactactgcaacgagtgc
gacgtggaggtgttcaacatcctgttcgtgacgagcgagaacggcagccgcaacacgtac
ctggtgcactgcgaggcctgtgcgcggcgccgcagcgccggcctgcagggcgtggtggtg
ctggagcagtaccgcaccgaggagctggcgcaggcctacgacgccttcacgctggccccc
gccagcacgtcgcgatga

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