KEGG   Sus scrofa (pig): 100515791
Entry
100515791         CDS       T01009                                 
Symbol
C10H9orf72
Name
(RefSeq) protein C9orf72 homolog
  KO
K23609  guanine nucleotide exchange protein C9orf72
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04140  Autophagy - animal
ssc05014  Amyotrophic lateral sclerosis
ssc05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100515791 (C10H9orf72)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100515791 (C10H9orf72)
   05022 Pathways of neurodegeneration - multiple diseases
    100515791 (C10H9orf72)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100515791 (C10H9orf72)
Membrane trafficking [BR:ssc04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    100515791 (C10H9orf72)
SSDB
Motif
Pfam: C9orf72-like
Other DBs
NCBI-GeneID: 100515791
NCBI-ProteinID: XP_003130743
Ensembl: ENSSSCG00000011010
UniProt: A0A4X1ULM5 A0A287AZU9
LinkDB
Position
10:38389366..38415903
AA seq 481 aa
MSTLCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPAERKCSRLCEAESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPTTHIDVDINTVKQMPPCHEHIYNQRRYMRSELAAFWRATSEEDMAQDTVIYTDESF
TPDLNIFQDVLHRDTLVKAFLDQVFHLKPGFSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRNLKVDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgtcaactctctgtccaccgccatctccagccgttgccaagacagagatcgctttaagt
ggtgaatcccctttattagccgctacctttgcttactgggacaatattcttggcccaaga
gtaaggcacatttgggctccaaagacggaacaggtacttctcagcgacggagaaatcact
tttcttgccaaccataccctcaatggagaaatccttcgcaatgctgagagtggagccata
gacgtgaagtttttcgtcttgtctgaaaagggagtgattattgtttcattaatcttcgat
ggaaactggaacggggatcggagcacatatggactatcaatcatacttccccagacggag
ctgagcttctacctcccacttcacagggtgtgtgtggatagattaacacacattatccgg
aaaggaaggatatggatgcacaaggaaaggcaagaaaatgtccagaagatagtcttagaa
ggcacagagagaatggaagatcagggtcaaagtattattccaatgcttactggagaagta
attcctgtaatggaattgctttcatctatgaaatcacacagtgttcctgaagaaatagat
atagctgatacagttctcaatgatgatgatatcggtgacagttgtcatgagggctttctt
ctcaatgccatcagctcacacttgcaaacctgtggctgttctgttgtagtaggcagcagt
gcagagaaagtaaataagatagtaagaacattatgcctttttctgactccagcagagaga
aaatgctccagattatgtgaagcagaatcatcctttaagtacgagtcagggctctttgta
caaggtctactaaaggattcaactggaagctttgtgcttcccttccggcaagtcatgtat
gcgccctaccccaccacacacatagatgtggacatcaacactgtcaagcagatgccaccc
tgtcacgaacatatttataatcagcgtaggtacatgagatcagagctggcagcgttctgg
agagccacttcagaagaggacatggctcaggacaccgtcatctacacagacgagagcttc
actcctgatttgaatatttttcaagatgtcttacaccgagacactctcgtaaaagccttc
ctggatcaggtctttcatttgaaacccggtttctctctcaggagtactttccttgcacaa
tttctgcttgtccttcacagaaaagccttgacgctaataaaatacatagaagatgatacg
cagaaggggaaaaagccttttaaatcgcttcggaacctgaaggtagaccttgacctaaca
gcagagggcgatcttaacataataatggctctagctgagaaaattaagccaggcctccat
tcctttatctttggaagacctttctatactagtgtgcaagaacgagatgtcctaatgact
ttctaa

DBGET integrated database retrieval system