Sus scrofa (pig): 100515791
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Entry
100515791 CDS
T01009
Symbol
C10H9orf72
Name
(RefSeq) protein C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04140
Autophagy - animal
ssc05014
Amyotrophic lateral sclerosis
ssc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100515791 (C10H9orf72)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100515791 (C10H9orf72)
05022 Pathways of neurodegeneration - multiple diseases
100515791 (C10H9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100515791 (C10H9orf72)
Membrane trafficking [BR:
ssc04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
100515791 (C10H9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
100515791
NCBI-ProteinID:
XP_003130743
Ensembl:
ENSSSCG00000011010
UniProt:
A0A4X1ULM5
A0A287AZU9
LinkDB
All DBs
Position
10:38389366..38415903
Genome browser
AA seq
481 aa
AA seq
DB search
MSTLCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPAERKCSRLCEAESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPTTHIDVDINTVKQMPPCHEHIYNQRRYMRSELAAFWRATSEEDMAQDTVIYTDESF
TPDLNIFQDVLHRDTLVKAFLDQVFHLKPGFSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRNLKVDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactctctgtccaccgccatctccagccgttgccaagacagagatcgctttaagt
ggtgaatcccctttattagccgctacctttgcttactgggacaatattcttggcccaaga
gtaaggcacatttgggctccaaagacggaacaggtacttctcagcgacggagaaatcact
tttcttgccaaccataccctcaatggagaaatccttcgcaatgctgagagtggagccata
gacgtgaagtttttcgtcttgtctgaaaagggagtgattattgtttcattaatcttcgat
ggaaactggaacggggatcggagcacatatggactatcaatcatacttccccagacggag
ctgagcttctacctcccacttcacagggtgtgtgtggatagattaacacacattatccgg
aaaggaaggatatggatgcacaaggaaaggcaagaaaatgtccagaagatagtcttagaa
ggcacagagagaatggaagatcagggtcaaagtattattccaatgcttactggagaagta
attcctgtaatggaattgctttcatctatgaaatcacacagtgttcctgaagaaatagat
atagctgatacagttctcaatgatgatgatatcggtgacagttgtcatgagggctttctt
ctcaatgccatcagctcacacttgcaaacctgtggctgttctgttgtagtaggcagcagt
gcagagaaagtaaataagatagtaagaacattatgcctttttctgactccagcagagaga
aaatgctccagattatgtgaagcagaatcatcctttaagtacgagtcagggctctttgta
caaggtctactaaaggattcaactggaagctttgtgcttcccttccggcaagtcatgtat
gcgccctaccccaccacacacatagatgtggacatcaacactgtcaagcagatgccaccc
tgtcacgaacatatttataatcagcgtaggtacatgagatcagagctggcagcgttctgg
agagccacttcagaagaggacatggctcaggacaccgtcatctacacagacgagagcttc
actcctgatttgaatatttttcaagatgtcttacaccgagacactctcgtaaaagccttc
ctggatcaggtctttcatttgaaacccggtttctctctcaggagtactttccttgcacaa
tttctgcttgtccttcacagaaaagccttgacgctaataaaatacatagaagatgatacg
cagaaggggaaaaagccttttaaatcgcttcggaacctgaaggtagaccttgacctaaca
gcagagggcgatcttaacataataatggctctagctgagaaaattaagccaggcctccat
tcctttatctttggaagacctttctatactagtgtgcaagaacgagatgtcctaatgact
ttctaa
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integrated database retrieval system