Sus scrofa (pig): 100518650
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Entry
100518650 CDS
T01009
Symbol
POLK
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase kappa
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03460
Fanconi anemia pathway
ssc05169
Epstein-Barr virus infection
ssc05200
Pathways in cancer
ssc05202
Transcriptional misregulation in cancer
ssc05210
Colorectal cancer
ssc05212
Pancreatic cancer
ssc05213
Endometrial cancer
ssc05214
Glioma
ssc05216
Thyroid cancer
ssc05217
Basal cell carcinoma
ssc05218
Melanoma
ssc05220
Chronic myeloid leukemia
ssc05222
Small cell lung cancer
ssc05223
Non-small cell lung cancer
ssc05224
Breast cancer
ssc05225
Hepatocellular carcinoma
ssc05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100518650 (POLK)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100518650 (POLK)
05202 Transcriptional misregulation in cancer
100518650 (POLK)
09162 Cancer: specific types
05210 Colorectal cancer
100518650 (POLK)
05212 Pancreatic cancer
100518650 (POLK)
05225 Hepatocellular carcinoma
100518650 (POLK)
05226 Gastric cancer
100518650 (POLK)
05214 Glioma
100518650 (POLK)
05216 Thyroid cancer
100518650 (POLK)
05220 Chronic myeloid leukemia
100518650 (POLK)
05217 Basal cell carcinoma
100518650 (POLK)
05218 Melanoma
100518650 (POLK)
05213 Endometrial cancer
100518650 (POLK)
05224 Breast cancer
100518650 (POLK)
05222 Small cell lung cancer
100518650 (POLK)
05223 Non-small cell lung cancer
100518650 (POLK)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100518650 (POLK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssc03400
]
100518650 (POLK)
Enzymes [BR:
ssc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100518650 (POLK)
DNA repair and recombination proteins [BR:
ssc03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
100518650 (POLK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
IMS_HHH_1
Motif
Other DBs
NCBI-GeneID:
100518650
NCBI-ProteinID:
XP_020940112
Ensembl:
ENSSSCG00000014082
LinkDB
All DBs
Position
2:84555648..84619490
Genome browser
AA seq
878 aa
AA seq
DB search
MDGTKEKNDSTKERNDNYKDDLLFRMGLNDNKAGMEGLDKEKINKIIMEATKGSRFYGNE
LKREKQVNQRIENMMQQKAQITSQQLRKAQLQVDRFAMELEQSRDLSNTIVHIDMDAFYA
AVEMRDNPELRDKPIAVGSRNMLSTSNYHARKFGVRGAMPGFIAKRLCPQLIIVPPNFDK
YRAVSSEVKEIFADYDPNFMALSLDEAYLNITKHLEERQNWPEDKRKYFIKTGNSLENDK
PGKEVNKLSEHERSISPLLFEDSXPDLKSPGNSFQVNFEEPNNPQMTQNSVVFGTSAEEV
VKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQVVMDFIKDLPIRK
VSGIGKVTEKMLKALGIITCTDLYQQRALLSLLFSETSWHYFLHISLGLGSTCLPRDGER
KSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKEGLKGRTVTLKLKNVDFEVKTRAST
VLSVISTAEEIFAIAKELLRTEIDADFPHPLRLRLMGVRLSSFPNEEEKKHQQRSIIGFL
QPGNQTLSATGCMLEKTDKDQFPKPLEMSHKKSFFDKKRSERKLSHQDTFKSEIVDRQSL
PTSQSFQVLKKKRSENLETLENSDNGQVFTCPVCFREQGSIGLEAFNKHVDACLDGPSVS
GNSKMSSCSHASSTEANQKEHVHDSISLFEKQDYRTHQKNTEITSVDSVELVETVSNPSN
AEGVDASSNKHSEEECSNLPSKSLHMEHHPQNPCTVALENDDVGSLGRQEPPQPYLYEVT
SDQVLVCPVCNLEQKTSDLTLFNVHVDVCLNKGIIQELRKDKVSPVNRPKDSTKTTDNPG
KVQKIGTKTKRPGLMTKYSASKKTKSNNPRHTIDIFFK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggatggcacaaaagagaagaatgacagcacaaaggaaaggaatgacaactacaaagat
gatcttctgtttaggatgggacttaatgataataaagctggaatggaaggattggataaa
gagaaaattaacaaaattataatggaggccacaaaggggtctagattttatggaaatgag
ctcaagagagaaaagcaagtcaaccaacgaattgaaaatatgatgcaacaaaaagctcag
attaccagccagcagctaaggaaagcacaattacaggttgacagatttgcaatggaattg
gaacagagccgggatctgagcaataccatagtgcacattgacatggatgctttctatgca
gccgtagaaatgagggacaatccagaactaagggataagcccattgctgtaggatcaagg
aatatgttgtctacttcgaattaccatgcaaggaagtttggtgttcgtggagccatgcca
ggatttattgctaaaagactctgccctcaactgattatagtgccccccaattttgacaaa
taccgagctgtgagtagcgaggttaaggaaatatttgctgattatgatcccaattttatg
gccctgagtcttgatgaagcctacttgaacataacaaagcacttagaggaaaggcaaaat
tggcctgaggacaaaaggaagtatttcatcaaaacagggaactctctagaaaatgataaa
ccaggaaaggaagttaataaactgagtgagcatgaacgatccatctctccactacttttt
gaagatagtnctcctgatttgaagtccccaggaaattcttttcaagtgaactttgaagag
ccgaataatcctcaaatgacccaaaactcagttgtttttggaacatcagctgaggaagtg
gtaaaggaaattcgtttcagaatcgagcaaaaaacaacactgacagccagtgcaggcatt
gcaccaaatacaatgttagcaaaagtctgcagtgataagaataaaccaaatggacaatac
caaattctccctaaccgacaggttgtgatggacttcatcaaggacttacccattagaaag
gtttctggaataggaaaagttacagagaaaatgttaaaggctcttggaattattacgtgt
acagatctctaccaacagagggcattactttctctccttttctctgaaacatcttggcat
tatttccttcatatttccctgggtctaggttcaacatgcttgcccagggatggagagagg
aaaagcatgagtgttgagaggacattcagtgagataaataaagcagaagagcagtacagc
ttgtgccaagaactttgcagtgaacttgctcaagatctgcagaaagaaggacttaagggt
agaactgttacccttaagctgaagaatgtggatttcgaagtaaaaactcgtgcatctaca
gttttatctgttatttctactgcagaagaaatatttgccattgctaaagaattgctaaga
acagaaattgatgctgattttccacatcccttgagattaagacttatgggtgtgcggcta
tctagttttcctaatgaagaagagaagaaacaccaacagagaagcattattggcttctta
cagcctggaaaccaaaccctgtcagccactgggtgtatgctagagaaaactgacaaagat
cagtttccaaaacctctggaaatgtctcataagaagagtttctttgataaaaaacgatct
gaaaggaaattgagccaccaagacacatttaagagtgaaattgtagacagacaaagttta
ccgacatcacaatcattccaagttttaaagaagaagaggagtgagaatttagaaacattg
gagaattcagataatggtcaggtatttacctgtcctgtttgctttagggagcaaggaagc
attggtctggaagcctttaataaacacgtagatgcatgtcttgatgggccttcagtgagt
ggaaactctaaaatgtcctcgtgttcacatgcttcctctacagaagcgaatcagaaagaa
catgtacatgattctatttcactctttgagaagcaggattacagaacccatcagaagaat
acagagatcacttcagtagattctgtggaactggtagagactgtcagtaacccatctaat
gcagagggtgtagatgcttcaagtaataaacacagtgaagaagaatgttctaatcttcca
agcaaatcacttcatatggaacatcatccgcagaatccttgtactgttgcactggaaaat
gacgatgttgggtcattaggaaggcaggaacccccccaaccttatttatatgaagtgacc
agtgaccaagttctagtttgtccggtttgtaatctagaacagaagacttcagatcttacc
ttgttcaatgtgcatgtggatgtttgcttaaacaaaggcattatccaggaactgagaaag
gataaagttagtccagttaacagacccaaagatagcaccaaaactactgataacccgggc
aaagtacagaagattggaacaaaaactaaaaggccaggattgatgacaaagtactcggca
tcaaagaaaacaaaatcaaacaatcccagacataccattgacatattttttaaatga
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