Sus scrofa (pig): 100520334
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Entry
100520334 CDS
T01009
Symbol
GLI2
Name
(RefSeq) zinc finger protein GLI2
KO
K16798
zinc finger protein GLI2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04340
Hedgehog signaling pathway
ssc04390
Hippo signaling pathway
ssc05200
Pathways in cancer
ssc05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100520334 (GLI2)
04390 Hippo signaling pathway
100520334 (GLI2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100520334 (GLI2)
09162 Cancer: specific types
05217 Basal cell carcinoma
100520334 (GLI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100520334 (GLI2)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
100520334 (GLI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
100520334
NCBI-ProteinID:
NP_001302641
Ensembl:
ENSSSCG00000015733
UniProt:
F1RXX4
A0A8D0QV02
LinkDB
All DBs
Position
15:complement(30312528..30580272)
Genome browser
AA seq
1551 aa
AA seq
DB search
MEASASVPAAEKKEAKSGILEGIAFPEPGRKASALAVAAAVAAQGVPQHLLPPFHAPLPL
DMRHQEGRYHYEPHSVHGVPGPPALSGSPVVSDISLIRLSPHPAGPGESPFNAPHPYVSP
HMEHYLRAMHGSPTLPAIPAARGLSPADVAHEHLKERGLFGLPAPGANASDYYHQMTLMA
GHPTPYGDLLMQSGGAASAPHLHDYLNPVDMSRFSSPRVTPRLSRKRALSISPLSDASLD
LQRMIRTSPNSLVAYINNSRSSSAASGSYGHLSAGALSPAFTFPHPINPVAYQQILSQQR
GLGSAFGHTPPLIQPSPTFLAQQPLAVASINATPTQLSSSSNCLSDANQNKQSSESAVSS
TINPMVIHKRSKVKTEAEGLRPASPLTLTQEQLADLKEDLDRDDCKQEAEVVIYETNCHW
EDCTKEYDTQEQLVHHINNEHIHGEKKEFVCRWQACTREQKPFKAQYMLVVHMRRHTGEK
PHKCTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNE
KPYICKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKQRNDVHLRAPLLRENGDSEAGAE
PGRGSEDSTEASSTSQAVEDCLHVKAIKTESSGLCQSSPGAQSSCSSEPSPLGSAPNNDS
GVEMPGTGPGSLGDLTALDDTPPGADASALAAPSAGGLQLRKHMTAMHRFEQLKKEKLKS
LKDSCSWAGPAPHTRNSKLPPLPGSGSMLENFSGGPVGLLPNPRLSELSASEVTVLSHLQ
ERRDSSTSTVSSAYTVSRRSSGSSPYFSSRRSSDASPLGPGRANPASSADSYDPISTDAS
RRSSEASQCGGAGGPGLLQLTPAQQYSLRAKYAAATGGPPPTPLPGLERASLRARLALLD
APERAPPAACPRPVGVGLRRGSDGPHYGPTGVAPTFPHEGPGGGLRRASDPGRRPDALAP
PRVQRFHSAHNMAPAALPPTCTQGRGLRLQGHASADGGLARSAYSPRPPSISEDLVMEAV
AAAADSAGPEISLGLPEDDLVLPDDVVQYIKARAGGALEESTPQVYAPESTCFPENPKLP
SPGLPSQRRIAAADSNVGPSAPALGGCQLGYGAPSSLNKNSMPVQWNEVSSGTVDALASQ
MKPPPFPQGNLAVVQQKPAFSQYPGYSPQGLQPSPGSLDSSQPHLQPCGGAPSALRVNYM
HQLRQPGAGGQCPSMTAAVSPHTGYSQAHPQLSPSTMGGTLNQFPTSCSNMAAKPGHLGF
PQQMEVAPDPTMMGSNNRELGIPNSTLPGMPPTHAAQSYPQQSHLLATAMSQEGYRQGPS
LMPSHQPSFMEPQQGTMGVAGSSFGLVQPRPPPEPSPAGRHRGVRAGQQLAYARATGHAM
AALSANQEMAESVPKGTMLSLPPQPPAQDTGGAQDHSMLYYYGQIHMYEQNGGLERQAGC
QAMQPQPPQPQALPSPGVNQVSSTVDSQLLEAPQIDFDAIMDDGDHSSLLSGALSPGLLH
SLSQSSSRLTTPRNSLTLPSIPAGISNMAVGDMSSMLTSLAEESKFLNMIT
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atggaggcatctgcttcagtcccggctgcggagaagaaagaagccaagagtgggatcctg
gagggcatcgctttccctgagccgggcaggaaggcctctgcccttgcggtggccgccgca
gtagctgcccaaggagttccacagcatcttctgccaccgttccacgcccccttgccgctt
gacatgcgacaccaggaggggaggtaccattacgagccccattctgtccacggtgtaccc
gggcctcccgccctgagcggcagccccgtcgtctcagacatctcattgatccggctctcc
ccgcaccccgccggccctggggagtcccccttcaacgccccccacccgtacgtgagcccc
cacatggagcattacctccgcgccatgcacggcagccccacgctccccgccatccccgcg
gccaggggcctcagcccggcagacgtggcccacgagcaccttaaggagagggggctgttt
ggcctccctgctccaggcgccaacgcctcagactattaccaccagatgaccctcatggcg
ggccaccccacgccctatggggacctgctgatgcagagcgggggtgctgccagtgcaccg
catctccacgactacctcaatccagtggacatgtcgcgtttctccagcccccgggtgaca
ccccgcctgagccgcaagagggcgctgtccatctccccgctctccgacgccagcctggac
ctgcagcgcatgatccgaacctcgccaaactccctggtggcctacatcaacaattcgcgc
agcagctcagccgccagtggctcctatggccatctgtcggccggggccctcagcccggcc
ttcaccttcccgcaccccatcaaccccgtggcctaccagcagatcctgagtcagcagagg
ggcctgggctcagccttcggacacacaccacccttgatccagccctcacccaccttcctg
gcccagcagcccttggccgtggcctccatcaatgccacacccacccagctcagcagcagc
agcaactgtctgagcgacgccaaccagaacaagcagagcagcgagtcagccgtgagcagc
accatcaaccccatggtcattcacaagcgcagcaaggtcaagacagaggctgagggcctg
cggccagcctccccactgactctgacacaggagcagctggctgacctcaaggaagacctg
gacagggacgactgtaagcaggaggccgaggtggtcatctatgagaccaactgccattgg
gaagactgcaccaaggaatacgacacccaggagcagctggtgcatcacatcaacaacgag
cacatccacggggagaagaaggagttcgtgtgccgctggcaggcctgcacgcgggagcag
aagcccttcaaggcgcagtacatgctggtggtgcacatgcgcagacacacaggcgagaag
ccccacaagtgcacgttcgagggctgttccaaggcctactcccgcctggagaacctgaag
acgcacctgaggtcccacacaggagagaagccatacgtgtgtgagcacgagggctgcaac
aaggccttctccaacgcctcggaccgcgccaagcatcagaaccgcacccactccaacgag
aaaccctacatctgcaagatcccaggctgtaccaagcgatacacggaccccagctcactc
cggaaacacgtgaaaacggtccatggcccagatgctcacgtcaccaagaagcagcgcaat
gacgtgcacctccgcgcgcccctgctcagggagaacggggacagcgaggctggcgccgag
cccggccggggctccgaggacagcaccgaggccagcagcaccagccaggctgtggaggac
tgcctgcatgtcaaagccatcaagacggagagctccgggctgtgtcagtccagccccggg
gcccaatcttcctgcagcagtgagccctcacccctgggcagtgcccccaacaatgacagc
ggcgtggagatgccggggacagggcctgggagcctgggagacctgactgctctggatgac
acaccaccaggggccgatgcctccgccctggccgccccctctgccggtggcctgcagctg
cgcaaacacatgaccgccatgcaccggttcgagcagctcaagaaggagaagctcaagtcg
ctcaaggattcctgctcatgggccgggccagctccacacacccggaactccaagctgcct
cccctcccgggaagtggctccatgctggaaaacttcagcggcgggccggtggggctgctg
cccaacccgcgactgtcggagctgtccgccagcgaggtgactgtgctgagccacctgcag
gagcgccgcgacagctccaccagcacggtcagctcggcctacaccgtgagccgccgctct
tccggcagctccccctacttctccagccgccgctccagtgacgcctcacccctgggccct
ggccgcgcgaaccctgccagttctgccgactcctacgaccccatctccaccgatgcgtcg
cggcgctcgagcgaggccagccagtgcggcggtgctggtggcccagggctgctccagctc
acccccgcccagcagtacagcctgcgggccaagtacgcggcagccactggtgggccaccc
ccgacgccactgcccggcctggagcgcgcgagcctgcgggccaggctggcgctgctggat
gctccagagcgcgcgccgcccgccgcctgcccgcgcccagttggggtggggctgcggcgc
ggcagcgacgggccacactatggcccgacgggagtggcacccaccttcccccatgagggc
ccaggcggtgggctgcggcgggccagtgatcccgggaggcggcctgacgccttggcgccc
ccgcgggtccagcgcttccacagtgcccacaacatggccccggccgcgctgccaccaacg
tgcacccaggggcgaggcctccgccttcagggccacgcgagcgccgacggcggcctggcc
cgcagtgcctactcgccccggccgccgagcatcagcgaggacctggtgatggaggccgta
gcggcagcggcagacagcgcgggcccggagatcagtctcgggctgccagaggacgacctc
gtgcttcccgatgacgtggtgcagtacatcaaggcgcgtgcaggtggcgctctagaggag
agcaccccgcaagtgtacgccccggaaagcacctgcttccctgagaaccccaaactgccc
agcccagggctgcccagccagcgcaggatagcggccgcagactccaacgtgggcccctcc
gcccctgcgctgggaggctgccagctaggctacggggccccctccagcctgaacaagaac
agcatgcctgtgcagtggaacgaggtgagctccggcaccgtggacgccttggccagccag
atgaagcctcctcccttcccccagggtaacctggctgttgtgcagcagaagccggccttc
agccagtacccaggctacagtccgcaaggcctgcagccaagtcctgggagcctggacagc
tcacagccacaccttcagccctgtggtggggccccctcagcgctcagggtgaattacatg
caccaactgcggcagccaggggcaggtggccagtgtcccagcatgacagcggctgtgagc
ccccacaccggctacagccaagcccatccccagctgagccccagcaccatgggggggacc
ctgaaccagttccccacctcttgcagcaacatggcagccaagccaggccacctggggttc
ccccagcaaatggaggtggctcctgaccccaccatgatgggcagcaacaatagggaactt
gggatccccaattccaccctgcctgggatgccacccactcatgctgcacagagctacccc
cagcagagccatctcctggcaaccgccatgagccaggagggctaccgccaaggtcccagc
cttatgccttcccaccagcccagcttcatggagccccagcagggcacgatgggggtggct
ggatcaagctttggcctggtacaaccccggccaccaccggagcccagccctgctggccgc
caccgtggggtgcgtgctggacagcagctggcttatgccagggcgactggccatgccatg
gctgctctgtcagccaaccaggagatggcagagtctgtgcccaaaggtaccatgttgtcc
ctccccccacagccccccgcacaggacacaggcggggcccaggaccacagcatgctctac
tattacggccagatccatatgtacgagcagaatggaggcctagagagacaggcaggctgc
caggccatgcagccccagccaccgcagccccaggccttgccctcgcccggggtcaaccag
gtgtctagcacggtggactcccagctcctggaggccccccagattgattttgatgccatt
atggatgacggtgaccattccagcttgctctcgggcgccctgagccccggcctcctccac
agcctctcccagagctcctcgcgcctcaccacccctcggaactccctgacgctgccctcc
atccccgcgggcatcagcaacatggccgtcggggacatgagctccatgctcacgagcctg
gctgaggagagcaagttcctgaacatgatcacctaa
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integrated database retrieval system