Sus scrofa (pig): 100521277
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Entry
100521277 CDS
T01009
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04514
Cell adhesion molecules
ssc04520
Adherens junction
ssc04910
Insulin signaling pathway
ssc04931
Insulin resistance
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09167 Endocrine and metabolic disease
04931 Insulin resistance
100521277 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssc01009
]
100521277 (PTPRF)
Enzymes [BR:
ssc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
100521277 (PTPRF)
Protein phosphatases and associated proteins [BR:
ssc01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
100521277 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
PTP-SAK
Tc-R-P
Interfer-bind
DSPc
V-set
C2-set_2
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Arylsulfotran_N
Fn3_PTPRU
ICAM_N
DUF3377
TMEM154
Motif
Other DBs
NCBI-GeneID:
100521277
NCBI-ProteinID:
XP_020952499
LinkDB
All DBs
Position
6:complement(167656674..167743750)
Genome browser
AA seq
1987 aa
AA seq
DB search
MAPKPAPGRTMMPLVPALVVLGLVAGAHGDSKPVFIKVPEDQTGLSGGVASFVCQATGEP
KPRITWMKKGKKVSSQRFEVIEFDDGAGSVLRIQPLRVQRDEAIYECTATNSLGEINTSA
KLSVLEEEQLPPGFPSIDMGPQLKVVEKARTATMLCAAGGNPDPEISWFKDFLPVDPATS
NGRIKQLRSGALQIESSEESDQGKYECVATNSAGTRYSAPANLYVRDQREVRRVAPRFSI
PPSSQEVMPGGSVNLTCVAVGAPMPYVKWMVGAEELTKEDEMPVGRNVLELSNVVRSANY
TCVAISSLGMIEATAQVTVKALPKPPIDLVVTETTATSVTLTWDSGNSEPVSYYGIQYRP
AGTEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSP
PRRVQARMLSASTMLVQWEPPEEPNGLVRGYRVYYTPDSRRPLSAWHKHNTDAGLLTTVG
SLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEADSDTRIRLSWLLPP
QERVIKYELVYWAAEDEGQQHKVTFDPTSSYTLEDLKPDTLYRFQLAARSEMGVGVFTPT
VEARTAQSTPSAPPQKVTCVSVGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRER
HVVGGIGREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVE
VDPLNSTAVRVSWKLPVPSKQHGQIRGYQVTYVRLENGEPRGPPVIQDVMLAEAQWRPEE
SEDYETTISGLTPETTYSITVAAYTTKGDGARSKPKIVTTTGAVPGRPTMMVSTTAMNTA
LLQWHPPKELPGELLGYRLQYRRADEPRPNTIDFGKDDQHFTITGLHKGATYIFRLAAKN
RAGPGEEFEKEVTTPEDAPSGFPQNLRVVGLTTSTTELTWEPPVLAERNGRITNYTVVYR
DINSPQELRSVTADTHLTLSGLKPDTTYDVKVRAHTSKGAGPLSPSIQSRTMPVEQVFAK
NFRVAAAMKTSVLLSWEVPDSYKSAVPFRILYNGQSVEVDGHSMQKLIANLQPNTEYSFV
LMNRGSSAGGLQHLVSIRTAPDLLPHKPLPASAFIEDGRFTLSMPHVQDPSLIRWFYIMV
VPIDRVGGSMLAPRWSTPEELELDELLEAIEQGGGERRRRRRRQTERLKPYVAAQVDVLP
ETFTLGDKKSYRGFYNRPLSPDLSYQCFVLASLKEPVDQKRYAASPYSDEIVVQVTPAQQ
QEEPEMLWVTGPVLAVILIILIVIAILLFKSKQERKRTQSPSSKDEQSIGLKDSLLAHSS
DPVEMRRLNYQTPGSSVPSCPNISSMRDHPPIPVTDLADNIERLKANDGLKFSQEYESID
PGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAY
IATQGPLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQYWPARGTETYGLVQVTLL
DTVELATYTVRTFALHKSGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLD
AGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRAQRNYMVQTEDQYVFI
HEALLEAATCGHTEVPARSLYAHIQKLGQVPPGESVTAMELEFKLLASSKAHTSRFISAN
LPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAEST
EDFWRMLWEHNSTIVVMLTRLREMGRVSPSLGPPGPDSTPAPRPRTAVSSASQPHSTPKC
SETRSRLRLPPPPSSPDRGGWVLCPQEKCHQYWPAERSARYQYFVVDPMAEYNMPQYILR
EFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCS
AGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLG
SFDHYAT
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atggcccccaagccagccccagggaggacgatgatgcccctcgtgcctgcgctcgtggtg
cttggcctggtggcgggtgcccatggcgacagcaaacctgtcttcatcaaggttcctgag
gaccagactgggctgtccggaggggtggcctccttcgtgtgccaagccacaggggagccc
aagccgcgcatcacatggatgaagaaggggaagaaagtcagctcccagcgcttcgaggta
atcgagtttgacgacggggcggggtcggtgctgcggatccagccgttgcgggtgcagcga
gatgaagccatctacgagtgcacggccaccaacagtctgggcgagatcaacacgagcgcc
aagctgtcggtgcttgaagaggaacagctgccccccgggttcccctccatcgacatgggg
cctcagctgaaggtggtggagaaggcgcgcacggccaccatgctgtgcgctgcgggcggg
aatcccgaccctgagatctcttggttcaaggacttcctccctgtggaccctgccacgagc
aacggccgcatcaagcagctgcgttcaggtgccttgcagatcgagagcagcgaggagtca
gaccaaggcaagtacgagtgtgtggcgaccaactccgcaggcacgcgctactcggccccc
gccaacctgtacgtgcgagatcagcgagaagtgcgccgcgtggctccgcgtttctccatc
cctcccagcagccaggaggtgatgccaggcggcagcgtgaacctgacgtgcgtggccgtg
ggcgcgcccatgccctacgtgaagtggatggtgggggccgaggagctcaccaaggaggac
gagatgccggtcggccgcaacgtgctggagctcagcaacgtcgtgcgctccgccaactac
acctgcgtggccatctcctcgctgggcatgatcgaggccacggcccaggtcaccgtgaaa
gcgctgccgaagcctccgattgaccttgtggtgacagaaacaactgccaccagtgtcacc
ctgacgtgggactctgggaactcagagcctgtgtcctactacggcatccagtaccggcca
gcgggcacggagggccccttccaggaggtggacggcgtggccaccacccgctacagcatc
ggcggcctcagccctttctccgagtacgccttccgcgtgctggccgtgaacagcatcggc
cgcgggccgcccagcgaggcggtgcgggcgcgcacgggggagcaggccccctccagcccc
ccgcgccgcgtgcaagcgcgcatgctgagcgccagcaccatgctggtgcagtgggagccg
cccgaggagcccaacggcctggtgcggggctaccgcgtctactacacccccgactcccgc
cggccgctgagcgcctggcacaagcacaacacagacgccgggctcctcaccaccgtgggc
agcctgctgcccggcatcacctacagcctgcgcgtgctggccttcaccgccgtgggcgac
ggcccccccagccccaccatccaggtcaagacgcagcagggagtgcccgcccagcccgcg
gacttccaggccgaggcggactcagacaccaggatccggctctcgtggctgctgcccccg
caggagcgggtcatcaagtacgagctggtgtactgggcggccgaggacgagggccagcag
cacaaggtgaccttcgaccccacctcctcctacactctggaggacctgaagcctgacacg
ctgtaccgcttccagctggccgcccgctccgagatgggcgtgggcgtcttcacccccacc
gtcgaggctcgcacggcacagtccaccccctccgcccctccccagaaggtgacgtgtgtg
agcgtgggctccaccacagtccgggtaagttgggtgccaccgccggccgacagccgcaac
ggcgttatcacccagtactcggtggcctacgaggcagtggacggcgaggaccgtgagcgg
cacgtggtgggcggcatcggccgcgagcactccagctgggacctggtgggcctggagaag
tggacggagtaccgggtgtgggtgcgggcgcacacggacgtgggccccggccccgagagc
agcccggtgctggtgcgcaccgacgaggacgtgcccagtgggccaccgcggaaggtggag
gtggatccactgaattccacggctgtgcgcgtctcctggaagctgcccgtccccagcaag
cagcacggccagatccgaggctaccaggtcacctacgtgcggctagagaacggcgagcct
cggggcccgcccgtcatccaggacgtcatgctggccgaggcccagtggcggccagaggag
tccgaggactatgaaaccaccatcagtggcctgaccccggagaccacctactccattacc
gtggccgcctacaccaccaagggggacggcgcccgcagcaagcccaagatcgtcacgacc
acgggggcagtcccaggccggcccaccatgatggtcagcaccacggccatgaataccgcg
ctgctgcagtggcacccgcccaaggagctgcccggcgagctgctcgggtaccggctgcag
taccgccgggccgacgagccgaggcccaacaccatcgacttcggcaaagacgaccagcac
ttcaccatcacgggcctgcacaaaggggccacctacatcttccggctcgctgccaagaac
cgggccggcccgggggaggagtttgagaaggaggtcacgacccccgaggacgcgcccagc
ggcttcccccaaaacctgcgcgtggtggggctgaccacctccaccacggaactgacctgg
gagcccccggtgctggcggagaggaacgggcgcatcaccaactacacggtggtgtaccgc
gacatcaacagcccgcaggagctgcgcagcgtcaccgccgacacccacctgacgctctcc
ggcctcaagccagacaccacgtacgatgtcaaggtccgcgctcacaccagcaaaggcgcc
ggcccgctcagccccagcatccagtcccggaccatgcccgtggagcaagtgtttgccaag
aacttccgagtggcggctgccatgaagacgtcggtgctgctcagctgggaggtccccgac
tcctacaagtcggccgtccccttcaggatcctgtacaacgggcagagcgtggaggtggac
gggcactccatgcagaagctgatcgcaaacctgcagccgaacacggagtactcgttcgtg
ctgatgaaccgcggcagcagtgcgggcggcttgcagcatctcgtgtccatccgcaccgcc
cccgacctgctgccgcacaagccgctgccggcctctgccttcatagaggacggccgcttc
accctctccatgccccacgtgcaggacccctcgctcatcaggtggttctacatcatggtg
gtgcccattgaccgcgtgggagggagcatgctggcgccacgatggagcacgcccgaggag
ctggagctggacgagctgctggaggccatcgagcaaggcggcggggagcggcggcggcgg
cggcggcggcagacagagcggctgaagccatacgtggccgcccaagtggacgtgctgcct
gagaccttcaccctgggggacaagaagagctaccggggcttctacaaccggcccctgtct
ccagacctgagctaccagtgctttgtgctcgcctctctgaaggaacccgtggatcagaag
cgctacgccgccagcccctactccgacgagatcgtggtgcaggtgactccggcgcagcag
caggaggagcccgagatgctgtgggtgacgggccccgtcctggccgtcatcctcatcatc
ctcatcgtcatcgccatcctgctgttcaagagtaaacaagaaaggaaaaggacccagtcc
ccatcgtccaaggatgagcagtccattgggctgaaggactctctgctggcccactcctcc
gaccccgtggagatgcggaggctcaactaccagaccccaggttccagtgtccccagttgc
ccgaatatctcaagtatgcgagaccacccgcccatccccgtcaccgacctggcggacaac
atcgagcgcctcaaagccaacgatggcctcaagttctcccaggagtacgagtccattgac
cccggacagcagttcacgtgggagaattcaaacctggaggtgaacaagcccaagaaccgc
tacgccaacgtcatcgcctacgaccactctcgagtcatcctgacctccatcgatggcgtc
ccggggagcgactacatcaacgccaactacatcgacggctaccgcaagcagaatgcctac
atcgccacgcagggcccgctgccggagaccatgggtgatttctggcggatggtgtgggag
cagcgcacagccacagtggtcatgatgacgcggctggaggagaagtcccgcgtgaagtgt
gatcagtactggccggcccggggcaccgagacctacggcctcgtccaggtgaccctcctg
gacacggtggagctggccacatacaccgtgcgcaccttcgcgctccacaagagtggctcc
agtgagaagcgggagctgcggcagttccagttcatggcctggccggaccacggggttccc
gagtacccaacccccatcctggccttcctgcggcgggtcaaggcctgcaacccgctcgac
gcggggcccatggttgtgcactgcagcgcgggcgtgggccgcaccggctgcttcatcgtc
atcgacgccatgctggagcggatgaagcacgagaagacggtggacatctacggccacgtg
acctgcatgcgggcgcagcgcaactacatggtgcagacggaggaccagtacgtgttcatc
cacgaggcgctgctggaggccgccacgtgcggacacacagaggtgcccgcccgcagcctc
tacgcccacatccagaagctgggccaagtgcctcccggggagagcgtgactgccatggag
ctggagttcaagctgctggccagctccaaggcccacacatcccgcttcatcagcgccaac
ctgccctgcaacaagttcaagaaccgcctggtgaacatcatgccctacgaactgacccgg
gtgtgtctgcagcccatccgcggcgtggagggctccgactacatcaacgccagcttcctg
gacggctacagacagcagaaggcctacatagccacgcaggggcccctggcggagagcacc
gaggacttctggcgcatgctctgggagcacaactccaccatcgtcgtcatgctgacccgg
ctgcgggagatgggcagggtgagcccgtccctggggcccccgggacctgacagcacacca
gccccccgcccccgcacggccgtctcctctgcctcccagccccattccacccccaaatgc
tctgaaacccggagccgcctccgccttcctcccccaccttcctcccctgaccgtgggggc
tgggtcctctgtccacaggagaaatgccaccagtactggcccgcagagcgctctgctcgc
taccagtactttgtcgtcgacccgatggctgagtacaacatgccccagtacatcctgcgc
gagttcaaggtcacagacgcccgggatgggcagtcgaggacgatccggcagttccagttc
acggactggccagagcagggcgtgcccaagacgggcgagggcttcatcgacttcatcggg
caggtgcacaagaccaaggagcagttcgggcaggacgggcccatcacggtgcactgcagc
gccggcgtgggccgcaccggcgtgttcatcacgctgagcatcgtcctggagcggatgcgc
tacgagggcgtggtggacatgttccagaccgtgaagacgctgcgcacacagcgcccggcc
atggtgcagacggaggaccagtaccagctgtgctaccgcgcagccctggagtacctcggc
agctttgaccactatgcaacgtaa
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integrated database retrieval system
