Sus scrofa (pig): 100521277
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Entry
100521277 CDS
T01009
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04514
Cell adhesion molecules
ssc04520
Adherens junction
ssc04910
Insulin signaling pathway
ssc04931
Insulin resistance
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100521277 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100521277 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
100521277 (PTPRF)
09160 Human Diseases
09167 Endocrine and metabolic disease
04931 Insulin resistance
100521277 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssc01009
]
100521277 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssc04515
]
100521277 (PTPRF)
Enzymes [BR:
ssc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
100521277 (PTPRF)
Protein phosphatases and associated proteins [BR:
ssc01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
100521277 (PTPRF)
Cell adhesion molecules [BR:
ssc04515
]
Immunoglobulin superfamily
Type II RPTP family
100521277 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
PTP-SAK
Tc-R-P
Interfer-bind
DSPc
V-set
C2-set_2
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Arylsulfotran_N
Fn3_PTPRU
ICAM_N
DUF3377
TMEM154
Motif
Other DBs
NCBI-GeneID:
100521277
NCBI-ProteinID:
XP_020952499
LinkDB
All DBs
Position
6:complement(167656674..167743750)
Genome browser
AA seq
1987 aa
AA seq
DB search
MAPKPAPGRTMMPLVPALVVLGLVAGAHGDSKPVFIKVPEDQTGLSGGVASFVCQATGEP
KPRITWMKKGKKVSSQRFEVIEFDDGAGSVLRIQPLRVQRDEAIYECTATNSLGEINTSA
KLSVLEEEQLPPGFPSIDMGPQLKVVEKARTATMLCAAGGNPDPEISWFKDFLPVDPATS
NGRIKQLRSGALQIESSEESDQGKYECVATNSAGTRYSAPANLYVRDQREVRRVAPRFSI
PPSSQEVMPGGSVNLTCVAVGAPMPYVKWMVGAEELTKEDEMPVGRNVLELSNVVRSANY
TCVAISSLGMIEATAQVTVKALPKPPIDLVVTETTATSVTLTWDSGNSEPVSYYGIQYRP
AGTEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSP
PRRVQARMLSASTMLVQWEPPEEPNGLVRGYRVYYTPDSRRPLSAWHKHNTDAGLLTTVG
SLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEADSDTRIRLSWLLPP
QERVIKYELVYWAAEDEGQQHKVTFDPTSSYTLEDLKPDTLYRFQLAARSEMGVGVFTPT
VEARTAQSTPSAPPQKVTCVSVGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRER
HVVGGIGREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVE
VDPLNSTAVRVSWKLPVPSKQHGQIRGYQVTYVRLENGEPRGPPVIQDVMLAEAQWRPEE
SEDYETTISGLTPETTYSITVAAYTTKGDGARSKPKIVTTTGAVPGRPTMMVSTTAMNTA
LLQWHPPKELPGELLGYRLQYRRADEPRPNTIDFGKDDQHFTITGLHKGATYIFRLAAKN
RAGPGEEFEKEVTTPEDAPSGFPQNLRVVGLTTSTTELTWEPPVLAERNGRITNYTVVYR
DINSPQELRSVTADTHLTLSGLKPDTTYDVKVRAHTSKGAGPLSPSIQSRTMPVEQVFAK
NFRVAAAMKTSVLLSWEVPDSYKSAVPFRILYNGQSVEVDGHSMQKLIANLQPNTEYSFV
LMNRGSSAGGLQHLVSIRTAPDLLPHKPLPASAFIEDGRFTLSMPHVQDPSLIRWFYIMV
VPIDRVGGSMLAPRWSTPEELELDELLEAIEQGGGERRRRRRRQTERLKPYVAAQVDVLP
ETFTLGDKKSYRGFYNRPLSPDLSYQCFVLASLKEPVDQKRYAASPYSDEIVVQVTPAQQ
QEEPEMLWVTGPVLAVILIILIVIAILLFKSKQERKRTQSPSSKDEQSIGLKDSLLAHSS
DPVEMRRLNYQTPGSSVPSCPNISSMRDHPPIPVTDLADNIERLKANDGLKFSQEYESID
PGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAY
IATQGPLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQYWPARGTETYGLVQVTLL
DTVELATYTVRTFALHKSGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLD
AGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRAQRNYMVQTEDQYVFI
HEALLEAATCGHTEVPARSLYAHIQKLGQVPPGESVTAMELEFKLLASSKAHTSRFISAN
LPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAEST
EDFWRMLWEHNSTIVVMLTRLREMGRVSPSLGPPGPDSTPAPRPRTAVSSASQPHSTPKC
SETRSRLRLPPPPSSPDRGGWVLCPQEKCHQYWPAERSARYQYFVVDPMAEYNMPQYILR
EFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCS
AGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLG
SFDHYAT
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atggcccccaagccagccccagggaggacgatgatgcccctcgtgcctgcgctcgtggtg
cttggcctggtggcgggtgcccatggcgacagcaaacctgtcttcatcaaggttcctgag
gaccagactgggctgtccggaggggtggcctccttcgtgtgccaagccacaggggagccc
aagccgcgcatcacatggatgaagaaggggaagaaagtcagctcccagcgcttcgaggta
atcgagtttgacgacggggcggggtcggtgctgcggatccagccgttgcgggtgcagcga
gatgaagccatctacgagtgcacggccaccaacagtctgggcgagatcaacacgagcgcc
aagctgtcggtgcttgaagaggaacagctgccccccgggttcccctccatcgacatgggg
cctcagctgaaggtggtggagaaggcgcgcacggccaccatgctgtgcgctgcgggcggg
aatcccgaccctgagatctcttggttcaaggacttcctccctgtggaccctgccacgagc
aacggccgcatcaagcagctgcgttcaggtgccttgcagatcgagagcagcgaggagtca
gaccaaggcaagtacgagtgtgtggcgaccaactccgcaggcacgcgctactcggccccc
gccaacctgtacgtgcgagatcagcgagaagtgcgccgcgtggctccgcgtttctccatc
cctcccagcagccaggaggtgatgccaggcggcagcgtgaacctgacgtgcgtggccgtg
ggcgcgcccatgccctacgtgaagtggatggtgggggccgaggagctcaccaaggaggac
gagatgccggtcggccgcaacgtgctggagctcagcaacgtcgtgcgctccgccaactac
acctgcgtggccatctcctcgctgggcatgatcgaggccacggcccaggtcaccgtgaaa
gcgctgccgaagcctccgattgaccttgtggtgacagaaacaactgccaccagtgtcacc
ctgacgtgggactctgggaactcagagcctgtgtcctactacggcatccagtaccggcca
gcgggcacggagggccccttccaggaggtggacggcgtggccaccacccgctacagcatc
ggcggcctcagccctttctccgagtacgccttccgcgtgctggccgtgaacagcatcggc
cgcgggccgcccagcgaggcggtgcgggcgcgcacgggggagcaggccccctccagcccc
ccgcgccgcgtgcaagcgcgcatgctgagcgccagcaccatgctggtgcagtgggagccg
cccgaggagcccaacggcctggtgcggggctaccgcgtctactacacccccgactcccgc
cggccgctgagcgcctggcacaagcacaacacagacgccgggctcctcaccaccgtgggc
agcctgctgcccggcatcacctacagcctgcgcgtgctggccttcaccgccgtgggcgac
ggcccccccagccccaccatccaggtcaagacgcagcagggagtgcccgcccagcccgcg
gacttccaggccgaggcggactcagacaccaggatccggctctcgtggctgctgcccccg
caggagcgggtcatcaagtacgagctggtgtactgggcggccgaggacgagggccagcag
cacaaggtgaccttcgaccccacctcctcctacactctggaggacctgaagcctgacacg
ctgtaccgcttccagctggccgcccgctccgagatgggcgtgggcgtcttcacccccacc
gtcgaggctcgcacggcacagtccaccccctccgcccctccccagaaggtgacgtgtgtg
agcgtgggctccaccacagtccgggtaagttgggtgccaccgccggccgacagccgcaac
ggcgttatcacccagtactcggtggcctacgaggcagtggacggcgaggaccgtgagcgg
cacgtggtgggcggcatcggccgcgagcactccagctgggacctggtgggcctggagaag
tggacggagtaccgggtgtgggtgcgggcgcacacggacgtgggccccggccccgagagc
agcccggtgctggtgcgcaccgacgaggacgtgcccagtgggccaccgcggaaggtggag
gtggatccactgaattccacggctgtgcgcgtctcctggaagctgcccgtccccagcaag
cagcacggccagatccgaggctaccaggtcacctacgtgcggctagagaacggcgagcct
cggggcccgcccgtcatccaggacgtcatgctggccgaggcccagtggcggccagaggag
tccgaggactatgaaaccaccatcagtggcctgaccccggagaccacctactccattacc
gtggccgcctacaccaccaagggggacggcgcccgcagcaagcccaagatcgtcacgacc
acgggggcagtcccaggccggcccaccatgatggtcagcaccacggccatgaataccgcg
ctgctgcagtggcacccgcccaaggagctgcccggcgagctgctcgggtaccggctgcag
taccgccgggccgacgagccgaggcccaacaccatcgacttcggcaaagacgaccagcac
ttcaccatcacgggcctgcacaaaggggccacctacatcttccggctcgctgccaagaac
cgggccggcccgggggaggagtttgagaaggaggtcacgacccccgaggacgcgcccagc
ggcttcccccaaaacctgcgcgtggtggggctgaccacctccaccacggaactgacctgg
gagcccccggtgctggcggagaggaacgggcgcatcaccaactacacggtggtgtaccgc
gacatcaacagcccgcaggagctgcgcagcgtcaccgccgacacccacctgacgctctcc
ggcctcaagccagacaccacgtacgatgtcaaggtccgcgctcacaccagcaaaggcgcc
ggcccgctcagccccagcatccagtcccggaccatgcccgtggagcaagtgtttgccaag
aacttccgagtggcggctgccatgaagacgtcggtgctgctcagctgggaggtccccgac
tcctacaagtcggccgtccccttcaggatcctgtacaacgggcagagcgtggaggtggac
gggcactccatgcagaagctgatcgcaaacctgcagccgaacacggagtactcgttcgtg
ctgatgaaccgcggcagcagtgcgggcggcttgcagcatctcgtgtccatccgcaccgcc
cccgacctgctgccgcacaagccgctgccggcctctgccttcatagaggacggccgcttc
accctctccatgccccacgtgcaggacccctcgctcatcaggtggttctacatcatggtg
gtgcccattgaccgcgtgggagggagcatgctggcgccacgatggagcacgcccgaggag
ctggagctggacgagctgctggaggccatcgagcaaggcggcggggagcggcggcggcgg
cggcggcggcagacagagcggctgaagccatacgtggccgcccaagtggacgtgctgcct
gagaccttcaccctgggggacaagaagagctaccggggcttctacaaccggcccctgtct
ccagacctgagctaccagtgctttgtgctcgcctctctgaaggaacccgtggatcagaag
cgctacgccgccagcccctactccgacgagatcgtggtgcaggtgactccggcgcagcag
caggaggagcccgagatgctgtgggtgacgggccccgtcctggccgtcatcctcatcatc
ctcatcgtcatcgccatcctgctgttcaagagtaaacaagaaaggaaaaggacccagtcc
ccatcgtccaaggatgagcagtccattgggctgaaggactctctgctggcccactcctcc
gaccccgtggagatgcggaggctcaactaccagaccccaggttccagtgtccccagttgc
ccgaatatctcaagtatgcgagaccacccgcccatccccgtcaccgacctggcggacaac
atcgagcgcctcaaagccaacgatggcctcaagttctcccaggagtacgagtccattgac
cccggacagcagttcacgtgggagaattcaaacctggaggtgaacaagcccaagaaccgc
tacgccaacgtcatcgcctacgaccactctcgagtcatcctgacctccatcgatggcgtc
ccggggagcgactacatcaacgccaactacatcgacggctaccgcaagcagaatgcctac
atcgccacgcagggcccgctgccggagaccatgggtgatttctggcggatggtgtgggag
cagcgcacagccacagtggtcatgatgacgcggctggaggagaagtcccgcgtgaagtgt
gatcagtactggccggcccggggcaccgagacctacggcctcgtccaggtgaccctcctg
gacacggtggagctggccacatacaccgtgcgcaccttcgcgctccacaagagtggctcc
agtgagaagcgggagctgcggcagttccagttcatggcctggccggaccacggggttccc
gagtacccaacccccatcctggccttcctgcggcgggtcaaggcctgcaacccgctcgac
gcggggcccatggttgtgcactgcagcgcgggcgtgggccgcaccggctgcttcatcgtc
atcgacgccatgctggagcggatgaagcacgagaagacggtggacatctacggccacgtg
acctgcatgcgggcgcagcgcaactacatggtgcagacggaggaccagtacgtgttcatc
cacgaggcgctgctggaggccgccacgtgcggacacacagaggtgcccgcccgcagcctc
tacgcccacatccagaagctgggccaagtgcctcccggggagagcgtgactgccatggag
ctggagttcaagctgctggccagctccaaggcccacacatcccgcttcatcagcgccaac
ctgccctgcaacaagttcaagaaccgcctggtgaacatcatgccctacgaactgacccgg
gtgtgtctgcagcccatccgcggcgtggagggctccgactacatcaacgccagcttcctg
gacggctacagacagcagaaggcctacatagccacgcaggggcccctggcggagagcacc
gaggacttctggcgcatgctctgggagcacaactccaccatcgtcgtcatgctgacccgg
ctgcgggagatgggcagggtgagcccgtccctggggcccccgggacctgacagcacacca
gccccccgcccccgcacggccgtctcctctgcctcccagccccattccacccccaaatgc
tctgaaacccggagccgcctccgccttcctcccccaccttcctcccctgaccgtgggggc
tgggtcctctgtccacaggagaaatgccaccagtactggcccgcagagcgctctgctcgc
taccagtactttgtcgtcgacccgatggctgagtacaacatgccccagtacatcctgcgc
gagttcaaggtcacagacgcccgggatgggcagtcgaggacgatccggcagttccagttc
acggactggccagagcagggcgtgcccaagacgggcgagggcttcatcgacttcatcggg
caggtgcacaagaccaaggagcagttcgggcaggacgggcccatcacggtgcactgcagc
gccggcgtgggccgcaccggcgtgttcatcacgctgagcatcgtcctggagcggatgcgc
tacgagggcgtggtggacatgttccagaccgtgaagacgctgcgcacacagcgcccggcc
atggtgcagacggaggaccagtaccagctgtgctaccgcgcagccctggagtacctcggc
agctttgaccactatgcaacgtaa
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integrated database retrieval system
