Sus scrofa (pig): 100524070
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Entry
100524070 CDS
T01009
Symbol
TCF3
Name
(RefSeq) transcription factor E2-alpha isoform X1
KO
K09063
transcription factor E2-alpha
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04550
Signaling pathways regulating pluripotency of stem cells
ssc05166
Human T-cell leukemia virus 1 infection
ssc05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100524070 (TCF3)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100524070 (TCF3)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100524070 (TCF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100524070 (TCF3)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
100524070 (TCF3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Response_reg_2
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
100524070
NCBI-ProteinID:
XP_020939882
Ensembl:
ENSSSCG00000013437
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Position
2:76859079..76906275
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AA seq
642 aa
AA seq
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MNQPQRMAPVGTDKELSDLLDFSMMFPLPVANGKSRSASLAGAQFGSSGLEDRPSSGSWG
ASEQNSSSFDPSRSYGEGAQFSESHASLSSSTFLGPGLGGKGGERGTYTPFGRDAGVGSL
SQAGFPPSELALSSPGPLSPSGVKGGTQYYSYSGHPRRRTADSGLDAQPKKVRKVPPGLP
SSVYPPSSGDDYSRNTAAYPSTKTPSSAYPTPFYMADGSLHPPAELWSPPGQAGFGPMLG
GASSPLPLPPGGSSSVGSGSGGFGGLHQHERMGYQLHSTEVNGGLPAVSTFSSVPAAAYG
SVSSHTPPVSGADGLLGSRGTTASSSGDALGKALASIYSPDHSSNNFSSSPSTPVGSPQG
LAGTSQWPRAGAPGALSPSYDGGLHGLQSKMEDHLDEAIHVLRSHAVGTAGDVHGLLPGH
GALASGFAGPVMPLSGRHAGLVGAGHSEDGLSGSSGLMHNHVALPDLSRPPDSYGDLGRG
ASGAGEIKREEQEDEENLAAEHEEEKKEPKAPRARTSPEEDEDDLLPPEQKAEREKERRV
ANNARERLRVRDINEAFKELGRMCQLHLNSEKPQTKLLILHQAVSVILNLEQQVRERNLN
PKAACLKRREEEKVSGVAGDPQMVLSAAHPGLGEAHNPTGHM
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagccgcagaggatggcgcccgtgggcacggacaaggagctcagtgacctcctg
gacttcagcatgatgttccccctgccggtggccaacgggaagagccggtctgcctccctg
gctggtgcccagtttggaagctcaggtctggaggaccggcccagttcaggctcgtggggc
gccagtgagcagaacagctcctccttcgaccccagccggagctatggtgaaggtgcccag
ttcagcgagtcccacgccagcctctcttcgtccacattcctaggacccgggctcggaggc
aagggcggcgagcggggcacatacaccccctttgggagagacgcaggggttggcagcctg
tctcaggctggcttccctcccagtgagctggcccttagcagcccagggccgctgtccccc
tcaggtgtcaagggagggacccagtattattcctactctggccaccctcggaggagaact
gcggacagcggtctagatgcacagcccaagaaggtccgaaaggtgccaccaggtctccca
tcctcggtgtacccacccagctcaggtgatgactacagcaggaacacagccgcctacccg
tccaccaagacccccagcagcgcctaccccacccccttctacatggcagatggcagcttg
caccccccagccgaactctggagccccccaggccaggcaggttttgggcccatgctgggc
ggtgcctcgtcccccctgcccctcccaccaggtggcagcagctccgtgggcagcggcagc
ggtgggtttggtggcctacaccagcacgagcgcatgggctaccagctgcacagcacggag
gtgaatggcgggctcccagccgtgtccaccttctcctcggtccccgcagccgcctacgga
agcgtctccagccacacgccccctgtcagcggggccgacggcctcctgggctcccgtggg
accacagccagcagctcaggggacgcccttgggaaggcactagcctcgatctactcccca
gatcactcaagcaataacttctcatccagcccctcaacccccgtgggctccccacagggc
ctggcagggacgtcacagtggccccgagccggagctcctggtgccttatcgcccagctac
gatgggggcctccatggcctgcagagcaagatggaggaccacctggacgaggccatccat
gtcctccgcagccacgccgtgggcacagcaggggatgtgcacgggctgctgcctggccac
ggggcactggcctcaggctttgccggccctgtcatgccactgagcgggcggcacgctggc
ctggtgggagccggccactcagaagatggcctttcaggcagcagtggcctcatgcacaac
cacgtggccctccccgacctttctcgaccacctgactcctacggtgatctcgggcgtggc
gcctctggagctggtgagatcaagcgcgaggagcaggaggatgaggagaacttggcggcc
gagcacgaggaggagaagaaggagcccaaggccccgcgcgcgcgcaccagcccggaggag
gacgaggacgaccttctccccccagaacagaaggctgagcgggagaaggagcgccgggtg
gccaataacgcgcgggagcggctgcgggtccgagacatcaatgaggcttttaaggagctg
gggcgcatgtgccagctgcacctcaacagtgagaagccccagaccaaactgctcatcctg
caccaggccgtgtcggtcatcctgaacctggagcagcaggtgcgagagcgcaacctgaac
cccaaagcggcctgcttgaagcgacgagaagaggagaaggtgtcgggcgtggccggagac
ccccagatggtgctgtcagctgcccaccctggcctgggtgaggcccacaaccccaccggg
cacatgtga
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