Sus scrofa (pig): 100524223
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Entry
100524223 CDS
T01009
Symbol
HMGCS1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00280
Valine, leucine and isoleucine degradation
ssc00650
Butanoate metabolism
ssc00900
Terpenoid backbone biosynthesis
ssc01100
Metabolic pathways
ssc03320
PPAR signaling pathway
Module
ssc_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
100524223 (HMGCS1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
100524223 (HMGCS1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
100524223 (HMGCS1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
100524223 (HMGCS1)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
100524223 (HMGCS1)
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GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Cullin
Motif
Other DBs
NCBI-GeneID:
100524223
NCBI-ProteinID:
NP_001239144
Ensembl:
ENSSSCG00000016872
UniProt:
A0A5K1UCS8
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Position
16:complement(27936225..27957261)
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AA seq
520 aa
AA seq
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MPGSLPLNAEACWPKDVGIVALEIYFPSQYVDQAELEKYDGVAAGRYTIGLGQAKMGFCT
DREDINSLCMTVVQNLMERNSLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDI
EGIDTINACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAVYAAGNARPTGGVGAIALL
IGPNAPLIFERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIECYLSALDRCYSVYRKKI
HARWQKEGNDKDFTLNDFGFMVFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEA
FGDVKLEDTYFDRDVEKAFMKASSELFNQKTKASLLVSNQNGNMYTSSLYGCLASVLAQY
SPQELAGKRIGMFSYGSGLAATLYSLKVTQDATPGSALDKIIASLCDLKSRLDSRTCVAP
DVFTENMKLREDTHHLVNYIPQSSIDSLFEGTWYLVRVDEKHRRTYARRPSRNESTLDEG
VELVHSSTATEHIPSPAKKVPRLPATAAEPEVAVISNGEH
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtcacttcctttgaacgcagaagcctgctggccaaaagatgtgggaattgtt
gcccttgagatctattttccttctcaatatgttgatcaagcagagttagaaaaatacgac
ggtgtagctgctggaaggtatactattggcttgggccaggccaagatgggcttctgcaca
gacagagaagatatcaactctctttgcatgactgtggtccagaatcttatggagagaaat
agcctttcttatgattgcattgggcggctagaagttggaacagagacaatcatcgacaaa
tcaaagtcagtgaagactaatctgatgcagctctttgaggagtctgggaatacagatata
gaaggaatagacacaattaatgcatgctatggaggcacagctgctgtcttcaatgctgtt
aactggattgagtccagttcttgggatggacggtatgccctggtagttgcaggggatatt
gctgtttatgccgctggaaatgctagacctacaggtggagttggagccattgctctgcta
attgggccaaatgctcctttaatttttgaacgaggacttcgtgggacacatatgcagcat
gcctatgacttttacaagcctgatatgctttctgaatatcccatagtagatggaaaactg
tccatagaatgctatctcagtgcattagatcgctgctattctgtctaccgcaagaagatc
catgcccggtggcaaaaagagggaaatgataaagatttcaccttgaatgattttggtttc
atggttttccattcaccctattgtaaactggttcagaaatctctagctcggatgttgctg
aatgacttccttaatgaccagaacagagataaaaatagtatttatagtggcctggaggcc
tttggggatgttaaattagaagatacctactttgatagagacgtagaaaaggcatttatg
aaggctagttcagaactctttaatcagaaaacaaaggcatctttgcttgtgtcaaatcaa
aatggaaacatgtacacatcttcattgtacggctgccttgcatctgttcttgcacagtac
tcacctcaggagctggcaggaaagagaattggcatgttctcttatggttctggtttggct
gccactctgtactccctcaaagttacacaagatgccacaccaggatctgctcttgataaa
ataatagcaagtttatgtgatctaaaatcaaggcttgactcaagaacttgtgttgcacca
gatgtctttactgaaaacatgaagctccgagaagacactcatcacttggtcaattacatt
ccccagagttcaatagattcactttttgaaggaacatggtacctagttcgagtggatgaa
aagcacagaagaacttatgctcggcgcccctcccgaaatgagagcactttggatgaagga
gtagaacttgtccattcaagcacagccaccgagcatattccaagtcctgctaagaaagtg
ccaagactccctgcaacggctgcagaacctgaagtagctgtcatcagtaatggggagcat
taa
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