Sus scrofa (pig): 100524509
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Entry
100524509 CDS
T01009
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00310
Lysine degradation
ssc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100524509 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100524509 (PRDM6)
03036 Chromosome and associated proteins [BR:
ssc03036
]
100524509 (PRDM6)
Enzymes [BR:
ssc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
100524509 (PRDM6)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100524509 (PRDM6)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100524509 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
SET
zf-C2H2_4
Zap1_zf1
zf-C2H2_jaz
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
100524509
NCBI-ProteinID:
XP_020940342
LinkDB
All DBs
Position
2:126605416..126712463
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AA seq
596 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPHSSGGPLKSGGAVGPLGAPQPLQPPPPQERAE
APPDSLRPRPSSLSSASSTPASSSTSASSASSCAAAAAAAAALAGLSALPVAQLPVFAPL
AAAAVAAEPLPPKDLCLGAASGPGPSKCGGGGDGRGAPRFRCSAEELDYYLYGQQRMEII
PLNQHTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPPELPEWLRDLPR
EVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQAGVVRNTQHLWEIYDQDG
TLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYND
SYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDALQPFNKSSKLSPATQQRSVVFPQTPC
SRNFSLLDKSGPIESGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWKCGQCFKTFTQRI
LLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNN
HIRTHTGEKPFNDQSCSRTGLSGEITFPLPIDRSLCSASAGLCPITGIQALEGATN
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggagaccccggcggatcggcttttctcaaagtggacccagcttatttg
cagcactggcagcaactcttcccgcacagcagcggcggcccgctcaagagcggcggcgcc
gtgggtcccctgggcgcgccgcaacctctccagccgccgccgccacaggagcgcgccgag
gccccgccggacagcctgcgtccgcggccctcctcgctctcctccgcctcctccactcca
gcttcctcctccacctcggcctcgtccgcctcctcctgcgctgctgccgccgccgccgcc
gcggcgctggctggtctctcggccctgcccgtggctcagctgccggtgttcgcgcctctg
gccgccgccgccgtcgccgcggagccgctgccccccaaggacctgtgcctcggcgccgcc
tcgggcccggggccctccaagtgtggcggcggcggggacggtcggggcgccccacgcttc
cgctgcagcgcggaggagctggactattacctgtacggccagcagcgcatggagatcatc
ccgctcaaccagcacaccagcgaccccaacaaccgttgcgacatgtgtgcggataaccgc
aacggcgagtgccccatgcacgggccgctgcactcgctgcgccggctcgtgggcaccagc
agcgccgcggccgccgcgcccccgccggagctgccggagtggcttcgggacctgccgcgg
gaagtgtgcctgtgcaccagcaccgtgcccggcctagcctacggcatctgcgcggctcag
aggatccagcagggcacctggatcgggcccttccagggcgtgcttctgcccccggagaag
gtgcaggctggcgtcgtaaggaacacgcagcatctctgggagatatatgaccaagatggg
acactacagcactttattgatggtggggaacctagtaagtcgagctggatgaggtatatc
cgatgtgcaaggcactgcggagaacagaatctaacagtagttcagtacaggtcgaatata
ttctaccgagcctgtatagatattcccaggggtaccgagcttctggtgtggtacaatgac
agctatacgtctttctttgggatccccttacaatgcattgcccaggatgaaaacttaaat
gtcccctcaaccgtcatggaagccatgtgcagacaggacgccctgcagcccttcaacaag
agcagcaaactctcccccgccacccagcagcgctccgtcgtcttcccacagactccatgc
agcaggaacttctccctcctggataagtctgggcccatcgaatcaggatttaaccagatc
aacgtgaaaaaccagcgagtcctggcgagcccgacctccaccagccagctccactccgag
ttcagtgactggcatctctggaaatgcgggcagtgctttaagactttcacgcagcggatc
ctcttacagatgcacgtgtgcacacagaaccctgacagaccttaccagtgcggccactgc
tcccagtccttttcccaaccttcagaactgaggaaccacgtggtcacgcactccagtgac
cggcctttcaaatgcggctactgtggtcgtgcctttgccggcgccaccaccctcaacaac
cacatccgaacccacactggagaaaagcccttcaatgatcagagctgcagcaggacaggg
ctctctggagaaatcaccttccccctgcctattgacagatccctctgttctgcatcagcc
gggctttgtcccatcacaggcattcaagccttggaaggagccaccaattaa
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integrated database retrieval system
