Sus scrofa (pig): 100524587
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Entry
100524587 CDS
T01009
Symbol
TIAM1
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04014
Ras signaling pathway
ssc04015
Rap1 signaling pathway
ssc04024
cAMP signaling pathway
ssc04062
Chemokine signaling pathway
ssc04530
Tight junction
ssc04810
Regulation of actin cytoskeleton
ssc05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
100524587 (TIAM1)
04015 Rap1 signaling pathway
100524587 (TIAM1)
04024 cAMP signaling pathway
100524587 (TIAM1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100524587 (TIAM1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
100524587 (TIAM1)
09150 Organismal Systems
09151 Immune system
04062 Chemokine signaling pathway
100524587 (TIAM1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
100524587 (TIAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100524587 (TIAM1)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
100524587 (TIAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
Tiam_CC_Ex
RhoGEF
PH
RBD
PH_9
PDZ
PDZ_2
PDZ_6
SOS1_NGEF_PH
PH_11
RNA_pol_Rpc82
Motif
Other DBs
NCBI-GeneID:
100524587
NCBI-ProteinID:
XP_020926561
Ensembl:
ENSSSCG00000012034
UniProt:
A0A286ZN71
A0A8D1I1G4
LinkDB
All DBs
Position
13:complement(194774495..195235750)
Genome browser
AA seq
1592 aa
AA seq
DB search
MGNAESQNVVHEFYGEKHASLGRKHTSRSLRLSHKARRSRHASSGKVIHRNSEVSTRSSS
TPSIPQSLAENGLEPFSQEGTLEDFGSPIWVDRVDMGLRPVSYTDSSVTPSVDSSIVLTA
ASVQSMPDSEESRLYGDDATYLAEGGRRQHSYTSNGPTFMETASFKKKRSKSADIWREDS
LEFSLSDLSQEHLTSNEEILGSAEEKDCEEARGMEARASPRQLSTCQRANSLGDLYAQKN
SGVTANGGPRSKFAGYCRNLVSDIPDLANHKMPPAAATEALPYSNYNTLPCRKSHCLSEG
ATNPQISHSNSMQGRRAKTAQDVNVGEGSEFADSGIEGATTDTDLLSRRSNATNSSYSPP
TGRAFVGSDSGSSSTGDAARQGVYENFRRELEMSTTNSESLEEAGSAHSDEQSSGTLSSP
GQSDILLTATQGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYESD
GRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWIT
AIHSACAAAVARHHHKEDTLRLLKSEIKKLEQKIDMDEKMKKMGEMQLSSVTDSKKKKTI
LDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFSVS
SFHALVAARTGETGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKKQGRPSINQVFGEGT
EAVKKSLEGIFDDTVPDGKREKEMVLPSVHQHNPDCDIWVHEYFTPSWFCLPNNQPALTV
VRPGDTARDTLELICKTHQLDHSAHYLRLKFLIENKMQHYVPKPEEDIYELLYKEIEICP
KVTQNIQIEKSDAAGDNYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINN
RAAGSLNSSVLKDFLTQPSLGLLVRTYPELEAGAELLEKPPHRLDGPPADPSDSPLAFLT
SNTGPSLCSEQGSSAETAPEETEGPDLESSDETDHSSKSTEQVAAFCRSLHEMNPSDPSP
SPQDSAGPQLATMRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTQD
ELDVLFGNLTEMVEFQVEFLKTLEDGVRLVPDLEKLEKVDQFKKVLFSLGGSFLYYADRF
KLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPKQQHSSTLESYLIKPIQRILKYPLL
LKELFALTDAESEEHYHLDVAIKTMNKVASHINEMQKIHEEFGAVFDQLIAEQTGEKKEV
ADLSMGDLLLHTTVIWPNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHR
LSIYEDWDPFRFRHMIPTEALQVRALASADAEANAVCEIVHVKSESEGRPERVFHLCCSS
PESRKDFLKAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALKGARPAMSRAVSAP
SKSLGRRRRRLARNRFTIDSDAISASSPEKESQQPPGGGDTDRWVEEQFDLAQYEEQDDI
KETDILSDDDEFCESAKGAAADRDLQERLQAACISQRERGRKPLDSHASRMTQLKKQAAL
SGINGGLESTSEEVIWVRREDFAPSRKLNTEI
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgcagaaagtcaaaatgtagtgcatgagttttacggcgaaaagcatgccagc
ctggggcgcaagcacacatcgcgctctctgcgcctgtcgcacaaggcgcggcggagcagg
cacgcctcctcggggaaggtgatccaccggaactccgaagtgagcacccgctccagcagc
acccccagcatccctcagtccctggccgaaaatggcctggagcccttctcccaggaaggc
accctcgaggacttcgggagccctatttgggtggaccgagtggatatgggcttgagaccc
gtgtcttataccgattcttccgtcactcccagcgtagacagcagcatcgtcctcaccgca
gcctctgtgcagagcatgccagactcggaggagagcaggctttacggggatgacgctacg
tatttggcggagggaggcaggaggcagcattcctatacatccaatgggcccactttcatg
gagacggcgagctttaagaagaaacgctccaaatctgcagacatctggcgggaggacagc
ctggaattctcactctctgatctgagccaagaacatttaacaagcaacgaagaaatcttg
ggttccgcggaagagaaagactgcgaggaggctcgggggatggaagcccgggcgagtccg
cggcagctcagtacctgtcaacgtgccaattcgctgggggacttgtacgctcagaaaaac
tctggggtgacggcaaacggggggccgaggagcaaatttgcaggctattgtcggaatttg
gtgtctgatattcccgatcttgcaaaccataagatgccaccagctgctgctacagaggct
cttccgtacagtaattataacacacttccctgtaggaaatctcactgtctttctgaaggt
gccaccaacccacaaattagccatagcaacagcatgcaaggcagaagagcaaaaacagct
caggatgttaacgtgggcgagggtagcgagtttgccgacagtgggatcgaaggggccacc
actgacacggacctcctgtccaggcgatccaatgccaccaactccagctactcgcccccc
accggccgcgcttttgtgggcagtgacagcggcagcagctccaccggggatgcggcccgc
cagggggtgtatgagaacttccgccgggagctggagatgagcaccaccaacagcgagagc
ctggaggaggccggctctgcgcacagcgacgagcagagcagcgggaccctgagctcccct
gggcagtccgacatcctgctcacggccacccagggcactgtgcgcaaggccggagccctg
gctgtcaagaacttcctggtgcacaagaagaacaagaaggtggagtcggccacccggagg
aagtggaagcactactgggtgtccttgaaagggtgcacgctctttttctacgagagtgat
ggcaggtctggaatagaccacaacagcatcccgaagcacgccgtctgggtggagaatagc
atcgtgcaggccgtgcccgagcaccccaagaaagacttcgtcttctgcctcagcaattcc
ctgggcgatgccttcctctttcagaccaccagccagacggagctggaaaactggatcact
gccatccactctgcctgcgcagccgctgtcgcaagacaccaccacaaagaagacaccctc
cgcctcctgaaatcggagatcaaaaagctggaacagaagattgatatggatgaaaagatg
aagaaaatgggcgaaatgcagctgtcttcagtcactgactcgaagaagaagaaaactata
ttagatcagatctttgtttgggagcagaatcttgaacagtttcaaatggacctgtttcgt
taccgctgttacctagctagcctccaaggtggggagctgcccaacccgaaaaggctactt
gcttttgcaagccgacccaccaaagtggcaatgggccgccttggaatcttctctgtatca
tcttttcatgccctggtggccgcacgcactggtgaaactggagtcagaagacgtactcag
gccatgtccagatccgccagcaagagaaggagcaggttttcttctctttggggtctggac
actacctccaaaaagaagcagggacgcccaagcatcaatcaggtgttcggtgagggaact
gaggctgtaaagaaatctttagaaggaatatttgatgacactgttccagatggcaagagg
gagaaagaaatggtcttacccagcgtccaccagcataaccctgactgtgacatttgggtc
catgagtatttcactccatcctggttctgcctgcccaataaccagccagcgttgacggtc
gtgcggccaggggacactgcccgggacaccctggaactgatctgcaagacccatcaactg
gatcactctgctcattacctgcgcctgaaatttctgatagaaaacaaaatgcagcactac
gtgccaaagcccgaggaggacatttacgagctgctgtacaaagaaattgaaatttgtcca
aaagtcactcagaacatccagattgagaagtcagatgcggccggtgataattacggcttt
tcactttcttctgtggaagaagatggtatccgaaggctctatgtgaacagtgtaaaggaa
actggtttagcttccaagaaaggcctgaaagccggagacgagattctcgagatcaataat
cgtgctgccggctcgctgaactcatctgtgctcaaagatttcctcacgcagccgtccctg
ggcctcctggtgaggacctacccggagctggaggcaggagcagagctgctggagaagccg
ccccaccggctggacggtccccccgccgaccccagcgacagcccgctggcctttctcacc
agcaacacagggcccagcctctgcagtgagcagggcagtagtgccgagactgctcccgag
gagaccgaagggccagacttggagtcctccgatgagactgatcacagcagcaagagcacg
gaacaggtggccgcgttttgccgcagtctgcatgagatgaacccctctgacccaagcccg
tcgccccaggactccgctgggcctcagctggccaccatgagacagctcacggatgccgat
aagctgcgcaaggtcatctgtgagctcctggagacggagcgcacctacgtgaaagactta
aactgtctcatggagcgatacctaaaacctcttcaaaaagaaacttttctcacccaggat
gagcttgatgtgctctttggaaatttaactgaaatggtagagtttcaagtagaattcctg
aaaactctggaagatggagtgagattggtacctgatctggaaaagcttgagaaagttgat
caattcaagaaagtgctgttctctctggggggatcctttctgtattatgctgaccgcttc
aagctctacagtgccttctgcgccagccacacgaaggtccccaaggtcctggtgaaagcc
aagacggacacggctttcaaggcgttcctggatgcccagaacccgaagcagcagcactcg
tccactttggagtcttacctcatcaagcccatccagaggatcctcaagtacccgcttctg
ctgaaggagcttttcgccctgacagatgcagagagcgaggagcactaccacctggacgtg
gccatcaagactatgaataaggttgcaagtcatatcaatgagatgcagaaaatccatgaa
gaatttggagctgtgtttgaccagctgattgctgaacagactggtgagaaaaaagaggtg
gcagatctgagcatgggggacctgcttttgcacaccaccgtgatctggccaaacccgcca
gcctcactgggaaagtggaaaaaggagcctgaattggcagcttttgtcttcaaaacggcc
gtggtccttgtgtataaagatggttccaaacagaagaagaaactcgtaggatctcaccgg
ctttcaatttacgaggactgggaccccttccgatttcgacacatgattcctaccgaagcc
ttgcaggttcgagccttggcaagtgcagatgcagaagcaaatgccgtgtgtgaaattgtc
cacgtgaaatcagagtctgaagggaggccggagagggtcttccacctgtgttgcagctcc
ccagagagccgaaaggatttcctgaaagctgtgcattccatcctgcgcgataagcaccga
agacagctcctgaagaccgagagtctcccctcgtcccagcaatatgtcccttttggagga
aaacgattgtgtgcgctgaaaggggccaggccagccatgagcagggcagtgtccgcccca
agcaagtctcttgggaggaggaggcggcgcctggcccgaaacaggtttaccattgattct
gacgccatctccgccagcagcccggagaaggagtcccagcagccccccggtggcggggac
actgaccgctgggtagaggaacagtttgatcttgctcagtatgaggagcaggatgacatc
aaggagacagacatcctcagtgacgatgatgagttctgtgagtccgcgaaaggcgccgcc
gcggacagagacctgcaggagcggcttcaggctgcctgcatcagtcagcgggagagaggc
cggaagcccctggatagtcacgcgtcccgcatgacgcagctcaagaagcaagccgccctg
tcgggcatcaatggaggcctggagagcacgagcgaggaggtcatttgggttaggcgcgaa
gactttgccccctcccggaagctcaacactgagatctga
DBGET
integrated database retrieval system
