Sus scrofa (pig): 100524978
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Entry
100524978 CDS
T01009
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00514
Other types of O-glycan biosynthesis
ssc04330
Notch signaling pathway
ssc05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
100524978 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100524978 (LFNG)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100524978 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssc01003
]
100524978 (LFNG)
Enzymes [BR:
ssc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
100524978 (LFNG)
Glycosyltransferases [BR:
ssc01003
]
Glycan extension
O-Glycan
100524978 (LFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
100524978
NCBI-ProteinID:
XP_020941653
Ensembl:
ENSSSCG00000007572
UniProt:
A0A4X1TJP9
F1RI57
LinkDB
All DBs
Position
3:1721044..1819426
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AA seq
376 aa
AA seq
DB search
MLKRCGRRLLLALAGALLACLLVLTADPPPPPVPAERGRRALRSLAGPSGAAPATGLEAA
AAPALVREVHSLSEYFSLLTRARRDAGSPPGGVHRPADGLPRPLEPLAPHDVFIAVKTTK
KFHRARLDLLLETWISRHKEMTFIFTDGEDEALAKRTGNVVNTNCSAAHSRQALSCKMAV
EYDRFIESGRKWFCHVDDDNYVNVRALLRLLASYPHTQDIYLGKPSLDRPIQATERVSET
KVRPVHFWFATGGAGFCISRGLALKMSPWASGGHFMSTAERIRLPDDCTIGYIVEALLGV
PLIRSGLFHSHLENLQQVPTSELHEQVTLSYGMFENKRNAVHIKGPFSVEADPSRFRSIH
CHLYPDTPWCPHTAIF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagcgctgcggccgacgcctgctgctggcgctggcgggcgcgctgctcgcctgc
ctgctggtgctcacggccgacccgccgccgcccccggtacccgctgagcgcggtcggcgc
gcgctgcggagcctggcgggcccttcgggggcggccccggcgaccgggctggaggcggcg
gctgcgccagcgctagtccgcgaggtgcacagtctgtccgagtacttcagcctgctgacc
cgcgctcgtcgagacgcgggctcaccgcccgggggcgtccaccgccctgccgacggcctt
cctcggcccctggagccactcgcgccgcacgacgtcttcatcgcggtcaagaccaccaag
aagtttcaccgcgcgcgtctcgacctgctgctggagacatggatctcccgccacaaggag
atgacgttcattttcaccgacggggaagacgaagccctggccaagcgcacgggcaacgtg
gtcaatactaactgctcggccgcccacagccgccaggcgctgtcctgcaagatggccgtg
gagtacgaccgcttcatcgaatccgggagaaagtggttctgccacgtggatgatgataac
tacgtgaacgtgcgggccttgctgaggctgctggccagttacccgcacacacaggacatc
tacctgggcaagcccagcctggacaggcccatccaggccacggagagggtcagcgagacc
aaggtgcggccggtccacttctggtttgccaccggcggggcaggcttctgcatcagccga
gggctggccctgaagatgagcccatgggccagcggaggccacttcatgagcacggccgag
cggatccggctgccggacgactgtaccatcggctacatcgtggaggctctgctgggcgtg
cccctcatccgcagtgggctcttccactcccacctggagaacctgcagcaggtgcccacc
tccgagctccatgagcaggtgaccttgagctatggcatgtttgaaaacaagcggaatgcc
gtccacattaagggacctttctcagtggaggcggacccatccaggttccgctccatccac
tgccacctgtacccggacacaccctggtgtccccacactgccatcttctag
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