KEGG   Sus scrofa (pig): 100526216
Entry
100526216         CDS       T01009                                 
Symbol
SHARPIN
Name
(RefSeq) sharpin isoform X2
  KO
K20894  shank-associated RH domain-interacting protein
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04217  Necroptosis
ssc04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    100526216 (SHARPIN)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    100526216 (SHARPIN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssc04121]
    100526216 (SHARPIN)
Ubiquitin system [BR:ssc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   LUBAC complex
    100526216 (SHARPIN)
SSDB
Motif
Pfam: Sharpin_PH Zn_ribbon_RanBP ubiquitin
Other DBs
NCBI-GeneID: 100526216
NCBI-ProteinID: XP_003125494
Ensembl: ENSSSCG00000005914
UniProt: A0A8D1GS52
LinkDB
Position
4:600698..605711
AA seq 398 aa
MAPPAGGAAASSDPGSPAVLLAVHAAVRPLGAGPDAEAQLRRLQLSADPERPGRFRLELL
GAGHGAVGLEWPLESVYYNVRGPSQHELQPPPGGPGTLGLHFTDPQEAQRWAALVRSATM
EGQNGLPPALGPDTCPVSPPSPLEVPTPKAPQPKVHLPWSPGDLLEKEELAGRLAQAIES
GDEKRAAEAAATLAQHHAALRIQLQEACFPPGPVRLQVTVEDAASSAHVSLQVHPHCTVR
ALQEQVFSEFGFPPAVQRWVIGRCLCAPECSLASYGVRRDGDPAFLYLLSAPREAPGRNP
QRPHKTEGDLGRLFPQSLGLPRAPQPASSSLPTPLQPGWSCPSCTFINAPSRPGCEMCST
QRPWAWDTLPTASTQQVTRREDGPRSLDPLLNLSGNLS
NT seq 1197 nt   +upstreamnt  +downstreamnt
atggcgcctccagcgggcggcgcggccgcctcctcggacccgggctcgccggcggtgctc
ttggccgtgcacgccgcggtgaggccgctgggcgcggggccggacgccgaggcgcagctg
cggaggctgcagctgagcgcggaccccgagcgaccggggcgcttccggctggagctgctg
ggcgcgggacacggggcggtaggtttggagtggcccttggagtcagtttactacaacgtc
cgaggccccagccagcatgagctgcagcctccaccaggagggcctgggaccctcggcctg
cacttcacggatccgcaggaagctcagcggtgggcagccctggtccgcagtgccaccatg
gaaggacagaatggcttgcccccagccctaggcccagatacgtgccctgtttccccgccc
agtccccttgaggtgcccacacccaaggccccccaacccaaggtgcatcttccctggagc
cctggagacttgttggagaaagaagagctggcagggcgcctggctcaggccatagaaagt
ggggatgagaagcgggcagccgaggcagccgccaccctggcccagcaccacgcggccctc
aggatccagctgcaggaggcctgcttcccgcctggccccgtcaggctacaggtcacggtt
gaagacgctgcatcctctgcccatgtctcgctgcaggtccacccccactgcaccgtcagg
gccctccaggagcaggtcttctcagagtttggcttccctccggccgtgcagcgctgggtc
attgggaggtgcctgtgtgcccctgagtgcagccttgcttcctatggggtccggagggac
ggggacccggcctttctctacctgctttcagccccccgagaagccccaggacgcaatcct
cagcgcccccataagacggagggggacctgggccgcctgtttcctcagtccttggggctg
ccccgagcccctcagcctgccagctccagcctccccaccccccttcagcccggctggtcc
tgcccttcctgcaccttcatcaacgccccgagccgacccggctgtgagatgtgttccacc
cagaggccctgggcttgggacacccttcccacagcctccacccagcaggtcacaaggcga
gaggacggcccgaggtccctggacccccttctgaacctctccgggaacctgtcctga

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