Sus scrofa (pig): 100620989
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Entry
100620989 CDS
T01009
Symbol
RAPGEF3
Name
(RefSeq) rap guanine nucleotide exchange factor 3 isoform X1
KO
K08014
Rap guanine nucleotide exchange factor 3
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04015
Rap1 signaling pathway
ssc04024
cAMP signaling pathway
ssc04072
Phospholipase D signaling pathway
ssc04081
Hormone signaling
ssc04261
Adrenergic signaling in cardiomyocytes
ssc04670
Leukocyte transendothelial migration
ssc04720
Long-term potentiation
ssc04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100620989 (RAPGEF3)
04072 Phospholipase D signaling pathway
100620989 (RAPGEF3)
04024 cAMP signaling pathway
100620989 (RAPGEF3)
09133 Signaling molecules and interaction
04081 Hormone signaling
100620989 (RAPGEF3)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100620989 (RAPGEF3)
09156 Nervous system
04726 Serotonergic synapse
100620989 (RAPGEF3)
04720 Long-term potentiation
100620989 (RAPGEF3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
RasGEF_N
DEP
Motif
Other DBs
NCBI-GeneID:
100620989
NCBI-ProteinID:
XP_020948254
Ensembl:
ENSSSCG00000025364
LinkDB
All DBs
Position
5:complement(78101286..78134150)
Genome browser
AA seq
952 aa
AA seq
DB search
MKVGWPGESRWQVGLAVEDGSALGAPTVGGLPDVVPEGTLLNMVLRRMHRPRSCSYQLLL
EHQRPSRIQGLRWTPLTNSEESLDFSVSLEQASTERVLRAGKQLHRHLLATCPNLIRDRK
YHLRLHRQCCSGRDLVDGILALGLGVHSRSQAVGICQVLLDEGALCHVKHDWAFQDRDTQ
FYRFPGLEPEPAGVHELEEELVEALALLSQRGPDALLTVALRKPPGQRTDEELDLIFEEL
LHVKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKGTSWYIIWKGSVNVVTHGKGL
VTTLHEGDDFGQLALVNDAPRAATIILREDNCHFLRVDKQDFNRIIKDVEAKTMRLEEHG
KVVLVLERSSQGSGPSRPPTPGRNRYTVMSGTPEKILELLLEAMRPDSSAHDPTETFLSD
FLLTHSVFMPNAQLCAALLHHFHAEPAGGSEQECSTYVCNRRQQILRLVSQWVALYGPML
HTDPVATSFLQKLSDLVSKDARLSNLLREQWPERRRHHRLENGCGNASPQIKARHMPVWL
PSQDEPLPSSNCAIRAGDKVPYDICRPDHSVLTLQLPVTASVREVMAALAQEDGWTKGQV
LVKVNSAGDAVGLQPDARGVATSLGLNERLFVVNPQEVHELTPHPEQLGPTVSSAEGLDL
VSTKDLAGQLTDHDWSLFNSIHQVQGQSAGEESGWQGLPPWHVLASHAARSQVELIHYVL
GPQHLRDVTTANLERFMRRFNELQYWVATELCLCSVPSLRAQLLRKFIKLAAHLKEQKNL
NSFFAVMFGLSNSAISRLAHTWERLPHKVRKLYSALERLLDPSWNHRVYRVALTKLSPPV
IPFMPLLLKDMTFIHEGNHTLVENLINFEKMRMMARAVRMLHHCRSHSNVPLSPLRSRVS
HLHEDSQAARISTCSEQSLSTRSPAGTWASLQQLKVIDNQRELSRLSRELEP
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgggctggccaggtgagagccgctggcaggtgggcctggctgtggaggacggc
tcagctctgggagcaccaacggtgggaggcctcccggacgtggtgccggaggggacgctg
ctcaacatggtgctgaggaggatgcaccggccccgaagctgctcctaccagctgctgctg
gagcaccagcgccccagccgcatccaggggcttcgctggacgccactcaccaacagcgag
gagtccctggatttcagcgtgagcctggagcaggcctccacagagcgggtcctcagggct
gggaaacagctgcatcgacatctcctggccacctgccccaacctcatccgagaccgaaag
taccaccttaggctccaccggcagtgctgctctggccgggacctagtagatgggatcttg
gccctggggctgggggtccattcccggagccaagccgtgggaatctgccaggtgctgctg
gatgaaggtgccctctgtcatgtgaaacacgactgggccttccaggaccgagatacccaa
ttctaccgcttcccggggctggagccagagcctgcgggtgtccatgagctggaggaggag
ttggtggaggcgctggccctgctctcccagcgggggcctgacgccctgctcacagtggcc
cttcgaaagcccccgggtcagcgcacagatgaggagctggacctcatctttgaggagctg
ctgcacgtcaaggctgtggcccacctttccaactcggtgaagcgggaattagcggcggtt
ctgctctttgaaccacacagcaaggcagggactgtgctgttcagccaaggggacaagggc
acctcatggtacattatctggaagggatctgtcaacgtggtgacccatggcaagggcctg
gtgaccacactgcacgagggagatgacttcggacagctggctctggtgaacgatgcaccc
cgggcagccaccatcatcctgcgagaagacaactgtcactttctccgcgtggacaagcag
gacttcaaccgtatcatcaaggatgtggaagcaaagaccatgaggctggaagagcatggc
aaagtggtgttggtgctggagagaagctctcagggctctggcccttctcgtccccccacc
ccaggcaggaaccggtatacagtgatgtctggcacaccagagaagatcctagaactgctg
ttggaggccatgcggcccgattccagtgctcatgacccaacagagacattcctcagtgac
ttcctcctgacccacagtgtcttcatgcccaacgctcagctctgcgctgccctcctgcac
cacttccacgcggagccggcaggaggcagcgagcaggagtgcagcacctacgtctgcaac
aggaggcagcagatcctgaggctggtcagccagtgggtggctctgtatggccccatgctc
cacactgaccctgtggccaccagcttcctccagaaactgtcagacctggtgagcaaggat
gcccggcttagcaacctgctgcgggagcagtggcccgagaggcggcgacaccacaggttg
gaaaacggctgtgggaacgcatctcctcagataaaggcccggcacatgcctgtttggctc
cccagccaggacgagccccttcccagcagcaactgtgccatccgagctggggacaaagtc
ccctatgacatctgccggccagaccactcggtgctgaccctgcagctgccagtgacggcc
tcggtcagggaggtgatggcggccttggcccaggaggatggctggactaaggggcaggtg
ctggtgaaggtcaactccgcaggcgatgccgttggcctgcagccagatgcccgtggtgtg
gccacatccctggggctcaacgagcggctctttgttgtcaacccacaggaagtgcatgag
ctgaccccacaccccgagcagctggggcccaccgtgagctctgctgaggggctggacctg
gtgagcaccaaggacctggcgggccagctgacggatcacgactggagcctcttcaacagc
atccaccaggtgcaggggcagagcgcaggggaggagagtgggtggcagggactccccccc
tggcacgtgctggcctctcatgctgcccgctcccaggtggaactgatccactacgtgctg
gggccccagcatctgcgggacgtcaccaccgccaacctggagcgtttcatgcgccgcttc
aacgagttgcagtactgggtggccacggagctgtgtctctgctctgtgcccagcctgcgg
gcccagctgctcaggaagttcatcaaactggcagcccacctcaaggagcagaagaatctc
aattccttctttgctgtcatgtttggcctcagcaactcggccatcagccgcctggcccat
acctgggagcggctgccccacaaagtccggaagctgtactcagccctcgagaggctgctg
gacccctcatggaaccaccgagtgtaccgtgtagccctcaccaagctgtcccctcctgtc
atccccttcatgccccttcttctcaaagacatgaccttcatccatgagggaaaccacacc
ctggtggagaatctcatcaactttgagaagatgagaatgatggccagagccgtgcggatg
ctgcaccactgccgaagccacagcaatgtgcccctgtcaccactgagaagccgagtctcc
cacctgcacgaggacagccaggcggccaggatttccacgtgctcggaacagtccctgagc
acccggagtccggccggcacctgggcttctctccagcagctgaaggtcattgacaaccag
cgggagctgtctcgcctgtcccgggagctggagccttga
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