Sus scrofa (pig): 100622975
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Entry
100622975 CDS
T01009
Symbol
PHC2
Name
(RefSeq) polyhomeotic-like protein 2 isoform X1
KO
K11457
polyhomeotic-like protein 2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100622975 (PHC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100622975 (PHC2)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
100622975 (PHC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHC2_SAM_assoc
SAM_1
zf-FCS_1
SAM_2
SAM_PNT
zf-CGNR
Motif
Other DBs
NCBI-GeneID:
100622975
NCBI-ProteinID:
XP_013854595
Ensembl:
ENSSSCG00000025344
LinkDB
All DBs
Position
6:complement(89574030..89685275)
Genome browser
AA seq
943 aa
AA seq
DB search
MTQALGSKVVPLQAGGERAPTRAFSSTRSLSISLLPLSSQFLPALLPPELRAILQAMENE
LPPPHTSSSASVTSSTSGVSSSSGGGNSSNSGGSGRPAGPQISVYSGIPDRQTVQVIQQA
LHRQPSTAAQYLQQMYAAQQQHLMLQTAALQQQHLSSAQLQSLAAVQQASLVANRQGSTS
GSSASAQAPAQSSSINLAASPAAAQLINRAQSVNSAAASGIAQQAVLLGNTSSPALTASQ
AQMYLRAQMAQPGNLVQVARSLGGTVPLSPQLIFTPTATVATVQPELGTGSPARPPTPAQ
VQNLTLRTQQTPTAAASGPTPTQPVLPSLALKPTPGGSQPLPTPSQGRNTAQGSPAGAKP
GISDSVMEPVKKGDGNGSVPGSLEGRAGLSRVVPAVATHPLIAPAYAQLQPHQLLSQSSS
KHLQPQFVIQQQQQQQQQQQQQQQPPPQPSRPALQAQSHTQLASVPPSLALQPSSEAHPV
PLGPVTSTLPLQCPSANLHKPGSTQQCHPPTPDAGPHNGYPEGLPHTPQRRFQHASAVIL
QLQPASPVPQQCTPDDWKEVVPGEKSVPEMRSGPSPHQQAIVTALPGGLPVPKSPNIQQS
PAHETGQGIVHALTDLSSPGMTSGNGNSASSITGTAPQNGENKPPQAIVKPQILTHVIEG
FVIQEGAEPFPVGRSSLLVGNLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEG
TPLKLKCELCGRVDFAYKFKRSKRFCSMACAKRYNVGCTKRVGLFHSDRSKLQKAGATTH
NRRRASKTSLPTLTKDTKKQPAGTVPLSVTAALQLTHSQEDSSRCSDNSSYEEPLSPISA
SSSTSRRRQGQRDLELPDMHMRDLVGMGHHFLPSEPTKWNVEDVYEFIRSLPGCQEIAEE
FRAQEIDGQALLLLKEDHLMSAMNIKLGPALKIYARISMLKDS
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagccctcggttcaaaagtggtcccactgcaggctggtggggagcgggcgccc
acgcgtgcattctctagtacccgttcactgagcatttcccttctgcctctttcttcccag
ttcctgcctgcccttctgccacctgagctccgtgccatcctacaggccatggagaatgag
ctgccgcccccccacacgtctagcagtgccagtgtcaccagcagtaccagtggggtcagt
agcagcagcggcggtggcaacagcagcaacagtggtggaagtggccgccctgcagggccc
cagatttctgtatacagtggcattcctgaccggcagactgtccaggtgatccagcaggcc
ctgcaccggcagcccagcacagcggcccagtacctgcagcagatgtacgcggcccagcag
cagcacctcatgctgcagacggcagccctgcagcagcagcacctcagcagcgcccagctc
cagagcctggcagccgtgcagcaggcaagcttggtggccaacagacaagggagcacatca
ggcagcagtgcgtctgcccaggccccagcccagtcatcctcgatcaacctggccgcctcg
ccagcagcagcgcagctcatcaaccgggctcagagtgtcaactcagcagcagcctcgggc
atcgcccagcaggctgtgctcttgggcaacacgtcttctccagccctgactgcaagccaa
gcacagatgtatctacgggcacagatggcccagccaggtaacctggtgcaggtagctagg
agcctaggcggcactgttcctttgtcccctcagctcatcttcacgcccacggccaccgtc
gctactgtgcagcctgagctcggcactggctcccccgcccggccccccacccctgcccag
gtacagaacttgaccctccgaacacagcagacaccaactgcagcagcctcgggccctacc
cccacccagcccgtcctgcccagcttggccctgaaacccacgccaggtggtagccagcct
ctgcctaccccatcccagggcagaaacactgctcagggttcccctgcaggtgccaagcct
ggcataagtgacagtgtgatggagccagtcaagaagggagatggcaacggcagtgtgcca
gggagcttggagggccgggctgggctcagccgggtggtgcccgctgtggctacccacccc
ctcattgcaccagcctatgctcaactacagccacaccagctcctctcccagtcatcctca
aagcacctgcagccccagtttgtgatccagcagcagcagcagcagcagcagcagcagcag
cagcagcagcagccgccaccccagccatcacggccagcgctccaagcccagtcccacacc
cagctcgcctcggtgcctccgagcctggccctgcagcccagctccgaagcccaccctgtg
ccgctgggccccgtcacatccactctgcctctccagtgcccctctgccaacctgcacaag
cctggcagcactcagcagtgtcaccctcccacgccagatgctgggcctcacaatggatat
cctgagggcctgccccacacccctcaacgcaggttccagcatgcctcggctgtcatctta
caactacagcctgcttcaccggtgccccagcagtgcacccccgatgactggaaggaagtg
gtacctggggagaagagtgtgcctgagatgcggtctggcccatcaccgcatcagcaagcc
atcgtcactgccctgccaggtggcttgcctgtgcccaagagtcccaacatccagcagtcc
ccggctcacgagacagggcagggcattgttcatgcactgaccgacctcagcagccccggc
atgacctcagggaacggaaactctgcctccagcatcaccggcactgccccccagaatggt
gagaataaaccaccacaggccattgtgaaaccccaaatcctgacgcatgttatcgaaggg
tttgtgatccaggagggggcggagcctttcccggtgggacgctcgtccctgctggtgggg
aatctcaagaagaagtatgcacaggggttcttgcctgagaagcttccacagcaggaccat
accaccaccactgactcggagatggaggagccctatctgcaagaatccaaagaggagggt
actcccctcaaactcaagtgtgagctctgtggccgggtggactttgcctacaaattcaag
cgttccaagcgcttctgttccatggcttgtgcaaaaaggtacaacgtgggatgcaccaaa
cgggtgggccttttccactcggaccggagcaagttgcagaaggcaggagccacgacccac
aaccgccgtcgggccagcaaaaccagtctgccaacacttaccaaggataccaagaagcag
ccagcaggcactgtacccctttccgtcactgctgccctgcagctaacacacagccaggag
gactccagccgttgctcagataactcaagctacgaggaacccttgtcacccatctcagcc
agctcgtccacctcccgccggcgacaaggccagcgggacctggagctcccggacatgcac
atgcgggacctcgtgggcatgggacaccacttcctgccaagtgagcccaccaaatggaac
gtggaagacgtctatgagttcatccgctccctgccaggctgccaggagatagcagaggaa
ttccgcgcccaggagatcgacgggcaagctctgctgctgctcaaggaggaccacctgatg
agtgccatgaatatcaagctggggcccgccctcaagatctacgcgcgcatcagcatgctc
aaggactcctag
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