Sus scrofa (pig): 100623590
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Entry
100623590 CDS
T01009
Symbol
PKP1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssc04812
]
100623590 (PKP1)
Cytoskeleton proteins [BR:
ssc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
100623590 (PKP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
HEAT
V-ATPase_H_C
UTP20_C
ARM_LRRK2
Motif
Other DBs
NCBI-GeneID:
100623590
NCBI-ProteinID:
XP_020920167
Ensembl:
ENSSSCG00000030694
UniProt:
I3LGN8
A0A8D1AJX6
LinkDB
All DBs
Position
10:23689394..23735457
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AA seq
727 aa
AA seq
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MNHSPLKTALAYECFQDQDNSTLALPSDQKMKTGTSGRQRVQEQVMMTVRRQKSKSSQSS
TLSHSNRGSLYDGLADNYNNYGTASRGSYYTKFQAGNGSWGYPIYNGTLKREADNRRFSS
YSQMESWGRNYPRSGCHAPGAGSDICFMQKIKASRSEPDLYCDPRGTLRKGTLSSKGHKT
TQNRYSFYSTCSGQKAVKKYPVCPPSCTPKPDPVYIPPVSCSKDLSFNHSRASSKICSED
IECSGLTIPKAVQYLSSQDEKCQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVELLRSP
NQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLGRTRSTEIQKQLTGLLWNLSS
TDELKEELIADALPVLADRVIIPFSGWRDGNSNLSRDTVDPEVFFNATGCLRNLSSADAG
RQTMRNYTGLIDSLMAYVQNCVAASRCDDKSVENCMCILHNLSYRLDAEVPTRYRQLDYN
ARNTYTEKSSTGCFSNKSDRMMNNNYDCPLPEEEPNPKGSSWLYHSDAIRTYLNLMGKSK
KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLS
NMSRHPVLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQMAKQYF
SSNMINNVINLCRSSASPKAAEAARLLLSDMWSSKELQGVLRQQGFDRNMLGAFPGANTF
RNFTSRF
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactctccgctcaagaccgccttggcctacgaatgcttccaggatcaggacaac
tcgacgctggctctgccgtccgaccagaagatgaagaccggtacgtcgggccggcagcgc
gtgcaagagcaggtgatgatgaccgtcaggaggcagaaatccaagtcgtcccagtcgtcc
accctgagccactccaaccgaggttccttgtacgatggcctggccgacaattacaacaac
tacgggaccgccagtcggggcagctactacaccaagttccaggcgggcaacggctcgtgg
ggctatccgatctacaacgggaccctcaagcgggaggcggacaacaggcgctttagctcc
tacagccagatggagagctggggccggaactacccccgcagcggctgccacgccccgggc
gcgggcagcgacatctgcttcatgcagaagatcaaagccagccgcagcgaacccgacctc
tactgcgacccccggggcaccctgcgcaagggcacgctgagcagcaagggccacaagacc
acccagaaccgctacagcttctacagcacctgcagcggccagaaggccgtcaagaagtac
ccggtgtgcccaccctcctgcacgcccaagccggaccctgtgtacatcccgcctgtctcc
tgcagcaaggacctgtccttcaaccactcgagggccagctccaagatctgcagtgaggat
attgagtgcagcgggctgaccatcccgaaggccgtgcagtacctgagctcgcaggacgag
aagtgccaggccattggtgcctactacatccagcacacctgcttccaggacgagtctgcc
aagcagcaggtgtaccagctggggggcatctgcaagctggtggaactcctgcgcagcccc
aaccagaacgtgcagcaggctgcggccggggccctgcgcaacctggtgttccgcagcacc
accaacaagctggagacgcgccggcagaacggcatccgcgaggccgtcagcctcctgggg
agaaccaggagcacagagatccagaagcagctgactgggctgctgtggaacctgtcctcc
acggacgagctcaaggaggagctgatcgcagacgccctgccggtcctggccgaccgagtc
atcatccccttctccggctggcgtgacggcaacagcaacctgtcccgggacaccgtggac
cccgaggtcttcttcaacgcgacaggctgcttgaggaacctgagctccgcggatgcaggc
cgccagaccatgcgaaactacacggggctcattgactccctcatggcctatgtccagaac
tgcgtggcggccagtcgctgtgatgacaagtctgtggagaattgcatgtgtatcctgcac
aacctctcctatcgcctggacgccgaggtgcccacccgctaccgccagctggactacaat
gcccgtaacacctacaccgagaagtcctccaccggctgcttcagcaacaagagcgacagg
atgatgaacaacaactacgactgcccgcttcccgaggaggagcccaaccccaagggcagc
agctggctgtaccactccgacgctatccgcacctacctaaacctcatgggcaagagcaag
aaggacgccaccctggaggcgtgcgcaggcgccctgcagaacctgacagccagcaagggg
ctgatgtccagtggcatgagccagctgatcgggctgaaggagaagggcctgccgcaaatc
gcccgcctcctgcagtccggcaactcagacgtggtgaggtctggtgcctccctcctaagc
aacatgtcccgccaccctgtgctgcacagagtgatggggaaccaggtattcccagaggtg
acccgactcctcaccagtcacaccggcaacaccagcaactcggaagacatcttgtcgtcg
gcctgctacaccgtgaggaatctgatggcctcccaaccacagatggccaagcagtacttc
tccagcaacatgatcaacaatgtcatcaacctgtgtcgcagcagtgcctcccccaaggct
gcagaggctgcccgactcctcctgtctgacatgtggtccagcaaggagctgcagggggtc
ctcagacagcaaggcttcgacaggaacatgttgggagcttttcccggggccaacaccttc
aggaacttcacctcccggttctaa
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integrated database retrieval system
