Sus scrofa (pig): 100624420
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Entry
100624420 CDS
T01009
Symbol
PLOD3
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 isoform X1
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00310
Lysine degradation
ssc00514
Other types of O-glycan biosynthesis
ssc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100624420 (PLOD3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
100624420 (PLOD3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssc01003
]
100624420 (PLOD3)
Enzymes [BR:
ssc01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
100624420 (PLOD3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
100624420 (PLOD3)
2.4.1.66 procollagen glucosyltransferase
100624420 (PLOD3)
Glycosyltransferases [BR:
ssc01003
]
O-Glycan biosynthesis
O-linked Gal type
100624420 (PLOD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy
Anp1
2OG-FeII_Oxy_3
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
100624420
NCBI-ProteinID:
XP_020941919
Ensembl:
ENSSSCG00000028879
LinkDB
All DBs
Position
3:complement(8911787..8919525)
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AA seq
769 aa
AA seq
DB search
MASGPGLRLLLLPLLVLSPPPAASASDRPRGSDPVNPDKLLVITVATAETEGYRRFLRSA
EFFNYTVRTLGLGEEWRGGDVARTVGGGQKVRWLKKEMEKYADREDMVIMFVDSYDVLLA
GSPSELLKKFVQSGSRLLFSAEGFCWPEWGLAEQYPEVGTGKRFLNSGGFIGFAPVIHQI
VRQWKYKDDDDDQLFYTRLYLDPGLREKLGLNLDHKSRIFQNLNGALDEVVLKFGRNRVR
IRNVAYDTLPVVVHGNGPTKLQLNYLGNYVPNGWTPEGGCGFCDLDRRTLPGGQPPPRVL
LAVFVEQPTPFLPRFLQRLLLLDYPPDRVTLFLHNNEVYHEPHIAASWPQLQDHFSAVKL
VGPEEALTPGEARDMAMDTCRRDPKCEFYFSLDADAVITNPQVLRILIEENRKVIAPMLS
RHGKLWSNFWGALSPDEYYARSEDYVELVQRKRVGVWNVPYISQAYVIRGETLRTELPQR
EVFSGSDTDPDMAFCKSVRDKVSGTWGSMRGCWEAAPSISVTLLTPSPLTQGIFLHLSNR
HEFGRLLATSRYDTDHLHPDLWQIFDNPLDWKEQYIHENYSRALEGEGLVEQPCPDVYWF
PLLSEQMCDELVEEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQWLQLLRT
YVGPMTESLFPGYHTKTRAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKGLDYEGG
GCRFLRYDCVISSPRKGWGLLHPGRLTHYHEGLPTTRGTRYIMVSFVDP
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggcccgggactccggctcctgctgctcccgctgctggtgctgtcgcctcct
cctgcggcctcggcctcagatcgcccccggggtagcgaccccgtcaacccagataaactg
ctggtgatcaccgtggccacggccgagacagagggataccggcgtttcctgcgatcagca
gagtttttcaactacactgtgcggaccctgggcttgggagaggagtggcgagggggtgat
gtagcccgaacagttggtggaggacagaaggtcaggtggctaaagaaagaaatggagaaa
tatgcagaccgggaggatatggtcatcatgtttgtggacagctatgatgtgcttctggct
ggcagcccctcggagctgctgaagaagtttgtccagagtggcagccgcctgctcttctct
gcggagggcttctgctggcccgagtgggggctggcagagcagtaccctgaggtgggcacg
gggaagcgcttcctcaactctggtggattcattggcttcgcccccgtgatccaccaaatc
gtccgccagtggaagtacaaagacgacgatgacgatcagctgttctacactcggctctac
ctggacccaggactgagggagaaactcggccttaacctggatcacaaatctcggatcttt
cagaacctcaacggggctctagatgaggtggtgttaaagtttgggcggaatcgtgtgcga
atccggaacgtggcctacgacacgcttcctgttgtggtccatgggaatggtcctactaag
ctccagctgaattacctgggaaactatgtccccaatggctggactcctgagggaggctgt
gggttctgcgacctggaccggaggacactcccgggggggcagcctcccccccgggtgctt
ctggccgtgtttgtagaacaacctaccccgttcctgccccgcttcctacagcggctgctg
ctcctggactatccccctgacagggtcaccctcttcctgcacaacaacgaggtgtaccac
gagccgcacattgccgcctcctggccacagctccaggaccacttctcagctgtgaagctg
gtggggcctgaggaggccctgaccccgggcgaggccagggacatggccatggacacttgt
cggcgcgaccccaagtgtgaattctacttcagcctggacgctgatgccgtcatcaccaac
ccgcaggtcctgcgcatcctcattgaagagaacaggaaggtgatagcacccatgctgtcc
cgccacgggaaactgtggtccaacttctggggagccctgagccctgacgagtactacgcg
cgctcagaggactacgtggagctggtgcagcgcaagcgagtgggcgtgtggaacgtgccc
tacatatcgcaggcctacgtgatccggggggagaccctgaggacagagctgccccagagg
gaggtgttctcgggcagcgacactgacccggacatggccttctgcaagagcgtgcgggac
aaggtgagcgggacctggggctcaatgcgggggtgctgggaggcagccccctcaatctct
gtcacccttctcacaccctcccccctcacccagggcatcttcctccacctcagcaatcgg
cacgaatttggccgcctcctggccacttcccggtacgacacagaccacctgcaccccgac
ctctggcagatcttcgacaaccccctggactggaaagagcagtatattcacgagaactac
agccgggcccttgaaggagagggactcgtggaacagccctgcccagatgtgtactggttc
cctctgctgtcggagcaaatgtgtgatgagctggtggaagaaatggagcattacggccag
tggtcaggaggccggcatgaggattcaaggctggctggaggctacgagaatgtgcccacc
gtagacatccacatgaagcaggtgggctatgaggaccagtggctgcagctgctgaggaca
tatgtggggcccatgaccgagagcctgttcccaggctaccacaccaagacccgggcggtc
atgaacttcgtggtccgctaccggccggatgagcagccctctctgcggccccatcacgac
tcatccaccttcaccctcaacgttgccctcaaccacaagggcctggattatgagggaggc
ggctgccgtttcttgcgctacgactgtgtgatctcgtccccacggaagggctgggggctc
ctgcaccctggccgtctcacccactaccatgaggggctgcccaccacacggggcactcgc
tatatcatggtgtcctttgtcgacccctga
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