Sus scrofa (pig): 100626008
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Entry
100626008 CDS
T01009
Symbol
LCA5L
Name
(RefSeq) lebercilin-like protein isoform X1
KO
K24828
lebercilin
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
100626008 (LCA5L)
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100626008 (LCA5L)
Cilium and associated proteins [BR:
ssc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100626008 (LCA5L)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
Other domain-containing proteins
Others
100626008 (LCA5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lebercilin
Tantalus
Matrilin_ccoil
Motif
Other DBs
NCBI-GeneID:
100626008
NCBI-ProteinID:
XP_005670410
Ensembl:
ENSSSCG00000028122
LinkDB
All DBs
Position
13:complement(202988483..203045199)
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AA seq
710 aa
AA seq
DB search
MSLADPTERTLDGHLPSVALESSRRSSKYEDHSPGFPGNGNASDKSVDYSRSCSCRSSSS
HYDYSEDFLSECSDTAVNRNDLEKAVVKGKKEKKKYPVSKVDRWPYYRAPQYWDFPGFLP
FISADESRFEAPMKPNSLSRHPKKMAFESGQKEISAEKKHHWNGPFSNSQLSVAALRRGT
MAHRLLSARLHKIKELKNELADIHRKLEATVLENQFLKQLQLKHLKAIGKYEHSQNNLPQ
IMIKHQNEVKNLKQLLRKSQGKERTVSRKLRETDIELLKTKDALQFLQKLSEDKNLAERG
ELTQRLSVVTAKMEANDKKIQSLEKQLKLKNKAFTRQLASENQKTLEAQAATKTLQTEVK
HLLQKLKEKDRELDIKNIYTNRIFKNLHDKEDYPKVSSTKSVQADRKSFSFPSVRHQGSQ
KSEDVPSWMTKGKKTAGSVGHQERSVEMIQAIPQGISKLPNQEDSKQKYADLSKEEGHVE
IQPPLENTGRQRERTEDPEKIILMKEERELPPERIQVVHPEGEGGQEDDTVKEKFKSPEI
SDMDETPDKNAPPSIKIPFRQRKHYSFTKATENLHHGLPASGGPANAGTTRYTHSTSKHC
THTEELRLEHPATAYEPSFGKSSRKATDTTFTEKKSNLMAELFGSGYVFKNSRTSTAAMK
GSEETLQSKKTHHLAPSQVSASNAFGDSKVTVVNSIKSSSPTEGKRKIII
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcactggctgatcccacagaaaggactctagatggacacctccccagcgtggcccta
gagagcagcaggaggtcttcgaaatatgaggaccacagcccaggtttccccgggaacggg
aacgcctcggataagagcgttgattacagcagatcctgctcctgcagaagctcgagttct
cactacgattactcagaagactttctgtctgaatgttcagacactgcagttaacagaaat
gacttagagaaggctgtcgtaaaagggaaaaaggaaaagaaaaagtatcctgtttctaaa
gttgacaggtggccttattacagagcaccacagtactgggatttcccgggcttcttgcct
ttcatctcagctgacgaatcaaggtttgaggcgcccatgaagcctaactctctgtctcgg
caccccaagaagatggccttcgagtccggccagaaggaaatctcagctgaaaaaaagcac
cactggaatggacccttttcaaattctcaactcagtgtggctgccctcagaagaggcacc
atggctcaccgcctgctctcagcgaggctgcataaaattaaggagctgaaaaatgaatta
gctgatatacatcgcaagctggaagccaccgtcctagaaaaccaatttctgaaacaactt
cagcttaagcacttgaaagctataggaaaatatgagcattcacaaaataacctacctcaa
attatgattaaacatcagaacgaagtaaaaaatttaaagcagctccttagaaaatcccag
ggaaaggaaagaactgtgtctaggaaacttcgagaaacagacattgagctgctgaagact
aaagatgccttgcagttcctgcagaagctttctgaagacaaaaatcttgcagagagggga
gaacttactcaaagattgtctgttgtcacagcaaaaatggaggcaaatgacaaaaaaata
cagagcttggagaaacaactgaaactgaaaaataaagcctttactcggcagttggcctct
gagaaccagaagactttagaagctcaagcagctacaaagactctgcaaacagaagtaaag
caccttctacaaaaacttaaggagaaggatcgagagcttgacattaaaaacatctatact
aatcggatatttaaaaacttacatgacaaagaagattatccaaaagtttcttcaacaaag
tcggtccaagcagacaggaagagtttttcattcccaagtgtgagacaccagggaagccaa
aaatcggaagatgttccgtcttggatgactaagggtaaaaagacagcaggcagcgttggt
catcaagaaaggtcagtggaaatgatccaggcaattcctcaaggtatcagtaaacttcca
aaccaagaggattccaagcaaaaatatgcagatttatccaaggaagagggacatgtagaa
atacagccacctctggagaatactggacgacagagagagagaacagaagacccagagaag
atcattttaatgaaagaagaacgggaactaccaccagaaagaattcaagtagtccatcct
gaaggggaaggtggtcaggaagatgatacagtaaaagaaaagtttaaaagtccagaaata
agtgacatggacgaaacgccagataaaaatgctcctccaagtatcaaaatacccttcaga
caaagaaagcattattcattcacgaaagcaactgaaaacttgcatcacgggcttcctgca
tctggtgggccagccaatgcaggcaccacgaggtacactcacagcacaagcaagcactgt
actcacacagaagagctgaggctggagcatcctgctacagcctatgaaccctcttttggt
aaatcttccagaaaagcaacagacacaactttcacagagaagaaaagcaatctaatggca
gaactctttggatcaggctatgtctttaaaaatagccgaacaagtactgctgctatgaaa
gggtctgaggagactttgcagagtaagaagacccatcatctagcccctagtcaggtctcc
gccagcaatgcttttggagattctaaagttactgtggtaaattctattaagtcatcttca
cctacagaaggaaagaggaaaataattatttaa
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integrated database retrieval system
