Sus scrofa (pig): 102167408
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Entry
102167408 CDS
T01009
Symbol
ADAMTS18
Name
(RefSeq) LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 18
KO
K08632
a disintegrin and metalloproteinase with thrombospondin motifs 18 [EC:3.4.24.-]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssc01002
]
102167408 (ADAMTS18)
Peptidases and inhibitors [BR:
ssc01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
102167408 (ADAMTS18)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
Reprolysin
Pep_M12B_propep
ADAMTS_CR_2
TSP1_spondin
Reprolysin_5
PLAC
Reprolysin_2
ADAMTS_CR_3
TSP1_CCN
Adt-1
Reprolysin_3
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
102167408
NCBI-ProteinID:
XP_020949424
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Position
6:10488504..10652508
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AA seq
1224 aa
AA seq
DB search
MECALLLACALPAVRSGPPWGPVGRGRVAQALQLCCLCCASVASALAGDSSVVGGGSGLN
HDYVFVTPVEVDSGGSYISHDILHSGRRKRAAPSASSSLHYRFSAFGQELHLELQPSAIL
SNHFIVQVLGKDGASETREPSVPRCFYQGFIRNDSSSSVAVSTCAGLSGLIRTRKNEFLI
SPLPQLLAREHNYSSPAGHHPHVLYKRTAEEEVQRCHGYLSSSRNYAGQPPSHTPHPSRG
PEGEHQPGRLQKQHFCGRRKKYTPQPPTKDTYLRFDEYGSAGRPRRSAGKSQKGLNVETL
VVADKKMVEKHGKANVTTYILTVMNMVSSLFKDGTIGSDINIVVVSLILLEEEPGGLLIN
HHADQSLNSFCQWQSALVGKNGKRHDHAILLTGYDICSWKNEPCDTLGFAPISGMCSKYR
SCTINEDTGLGLAFTIAHESGHNFGMIHDGEGNPCRKAEGNIMSPTLTGNNGVFSWSSCS
RQYLKKFLSTPQAGCLVDEPKQTGQYKYPDKLPGQIYDADTQCKWQFGAKAKLCSLGFVK
DICKSLWCHRVGHRCETKFMPAAEGTVCGLSMWCRQGQCVKFGEHGPRPVHGQWSAWSKW
SECSRTCGGGVRYQERHCNNPKPQYGGKFCPGSSRVYQLCNINPCNENSLDFRAQQCAEY
NSKPFRGWFYQWKPYTKVEEEDRCKLYCQAENFEFFFAMSSKVKDGTPCSSDKNDVCIDG
ICEPVGCDHELGSKAVSDACGVCKGDNSTCKFYKGLYLNQHKANEYYPVVTIPAGARSIE
IQELQISSSYLAVRSLSHKYYLTGGWSIDWPGEFAFAGTLFEYQRAFNRPERLSAQGPTN
ETLVFEILMQGKNPGIAWKYALPKVMNGTQPASKRHIHAWSTVYSDCSVTCGGGYISVKA
ICLRDQNTPVNSSFCNARAKPATEPQMCNAFSCPAYWKPGEWSVCSRSCAGGQQSXKVQC
VQKKPFQKEEAVLHSLCPVSTPTQVQACNSHACPPEWSLGPWSQCSKTCGRGVRKREVLC
KSPATAEGAPESLCASTPRPESQEGCVLGRCPKNTRLQWVVSSWSECSASCGLGVRKREM
KCSEKAFQGKLITFPERRCRNIKKPSLDLEETCNRGACPARPVYNMAAGWYSSPWQPCTV
TCGGGVQTRSVHCIQQGRPSSSCLLRQKPPVLRACNTNFCPAPEKREDPSCVDFFTWCHL
VPQHGVCNHKFYGKQCCKSCTRKS
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcgccctcctgctcgcgtgcgccctccccgccgtccgctcgggcccgccttgg
gggcccgtgggacgagggcgcgtggcccaggcgctccagctgtgctgcctctgctgtgcg
tcggtcgcctcagccttagccggtgacagcagcgtggtcggcggcggcagtggattaaac
catgattacgtctttgtcacgccggtagaagtggactcgggcgggtcatatatttcccac
gacattttgcacagcggcaggagaaagcgggcggcgccgagtgccagcagctccctgcat
taccgattttcagcatttggacaggaactccacttagaacttcagccctcggcgattttg
agcaatcactttattgtccaggtacttggaaaagatggtgcttcagagactcgggaaccc
tcggtgcccaggtgtttctatcagggatttatcagaaacgacagctcgtcctctgtcgct
gtgtctacatgtgccggcttgtcaggtctaataaggacacgaaaaaatgaattcctcatc
tcaccattacctcagctcctggcccgggaacacaactacagctcccccgctggccaccat
cctcacgtgctgtacaaaaggacggctgaggaggaggtccagcgttgccatggctacctg
agctccagccggaactatgctggacagcccccaagtcacactccccatccatcccggggg
ccggaaggagagcatcaacctggaaggttgcaaaagcagcatttttgtggacgacgcaag
aaatacacccctcaaccgcccaccaaggacacctatctcaggtttgatgaatatgggagc
gcgggacggccccgaagatcagctggaaagtcgcagaaaggcctaaacgtggaaaccctt
gtggtagcagacaagaaaatggtggaaaagcacggcaaggccaatgtcaccacgtacatt
ctcacggtcatgaacatggtttccagcctcttcaaagatgggaccattggaagtgatata
aacattgttgtggtgagcctcattcttctggaagaagaacctggaggattattgatcaat
catcatgcagaccagtctctgaatagtttttgtcagtggcagtctgccctcgttggaaag
aacggcaagaggcatgaccacgccatcttactcacgggatatgatatctgttcctggaag
aatgaaccctgtgacactctagggtttgctcccatcagtggaatgtgcagtaagtaccga
agttgtaccatcaatgaagatacagggcttggcctggccttcaccattgctcatgagtca
gggcacaatttcggcatgattcacgatggagagggcaacccctgcaggaaagctgaaggc
aatatcatgtctcccacgctaacagggaacaatggggtgttttcctggtcttcctgcagc
cggcagtatctcaagaaattccttagtacccctcaggctgggtgtctggtggatgagccc
aagcaaacaggacagtataaatatccggacaaactgccaggacagatttatgatgctgac
acacagtgcaagtggcagtttggagcaaaagccaagttatgcagccttggttttgtgaag
gacatttgcaaatcactttggtgccaccgagtgggccacaggtgtgagaccaagttcatg
cctgcagcggaagggaccgtttgtggcttgagtatgtggtgtcggcaaggtcagtgtgtc
aagtttggggagcacgggcctcggcctgtccacggccagtggtctgcctggtcgaagtgg
tcagaatgttcccgaacgtgcggtggaggcgtcaggtatcaagagagacactgcaataac
cccaagcctcagtatggtggcaagttctgtcctggttctagccgtgtatatcagctctgc
aacattaacccttgtaatgaaaatagcttggattttcgagctcagcagtgtgcagaatat
aacagcaaacctttccgtggatggttctaccaatggaaaccctatacaaaagtggaagag
gaagatcgatgtaaactgtactgccaggccgagaactttgaattcttctttgccatgtcc
agcaaggtgaaagatggaactccttgctcctcagacaaaaatgatgtttgtattgatggg
atttgtgaaccagtgggatgcgatcatgaacttggttctaaagcagtctcagacgcatgt
ggtgtttgcaaaggtgataattcaacctgcaagttttataaaggcctgtacctcaaccag
cataaagcaaatgaatattacccggtcgtcaccatcccagcgggcgcccgcagcatcgaa
atccaggaactgcagatttcctccagttacctcgccgtccgaagtctcagtcacaagtat
tacctcacagggggctggagcatcgactggccaggggagttcgcctttgcagggaccctg
tttgagtaccagcgcgccttcaaccgccccgaacgcctgtctgcacagggacccaccaat
gagacgctggtctttgaaattctgatgcaaggcaaaaatcctgggatagcttggaagtat
gcacttcccaaggtcatgaatggaactcagccagcctccaaaagacacatccatgcctgg
agcaccgtgtattccgattgttccgtcacctgcggtggaggttacataagtgtcaaggcc
atttgcttacgcgatcaaaacactccagtcaattcctcattctgcaatgcaagagccaag
ccagcaactgaaccccaaatgtgcaatgctttttcctgccctgcctactggaagccaggc
gaatggagtgtgtgcagccggtcatgtgccgggggtcagcagagcncgaaggtccagtgt
gtccagaagaagcccttccagaaggaggaagcggtactccattctctctgcccagtgagc
acacccactcaggtccaagcctgcaacagccatgcctgccctccagaatggagccttggg
ccctggtctcagtgttctaagacttgtgggcgaggggtaaggaagcgtgaagtcttgtgt
aaaagtcccgccacggcagagggtgcccctgagagcctgtgcgccagcaccccaagacca
gaatcgcaggagggctgcgtcctgggaagatgccccaagaacacccggctccagtgggtc
gtctcttcgtggagtgagtgttctgccagctgtggtttgggtgtgaggaagagggaaatg
aaatgcagcgagaaggccttccagggcaagctgataactttccccgagcgaaggtgccgc
aacattaagaaaccaagcctggacttggaagaaacctgcaacagaggggcgtgtccagcc
cgtccagtgtacaacatggcggctgggtggtactcatcgccatggcaaccgtgcaccgtg
acctgtggaggaggggtccaaacccgatcagtccactgtattcagcagggccgaccttcc
tcaagttgcctgctccggcagaaacctccagtgctacgagcctgtaatacaaacttttgt
ccagctcctgaaaagcgagaggatccatcctgtgtagatttcttcacctggtgccatctc
gttcctcagcatggtgtctgcaaccacaaattttacggtaaacagtgctgcaagtcatgc
acgaggaagagctga
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