Sus scrofa (pig): 110256098
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Entry
110256098 CDS
T01009
Symbol
NLRP1
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1 isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110256098 (NLRP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
110256098 (NLRP1)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ssc04054
]
110256098 (NLRP1)
Membrane trafficking [BR:
ssc04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
110256098 (NLRP1)
Pattern recognition receptors [BR:
ssc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110256098 (NLRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
UPA-FIIND
CARD
DNA_ligase_A_M
Motif
Other DBs
NCBI-GeneID:
110256098
NCBI-ProteinID:
XP_020923379
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All DBs
Position
12:51479968..51495540
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AA seq
459 aa
AA seq
DB search
MSGDGSSPKQQRQESEGSSPQVAQEKPLCLSSPAAPDDLHAESLRPEDDFWGPTGPVAIK
VVDQERSLYRVHFPMAGSYHWPHTGLHFVVRGPVTIEIEFCAWDQFLNKTIPRPNWRVAG
PLFDIKAEPGVVAAVYLPYFVALQESCVDISWFQVAHFKEEGMVLEKPAMVAPSYAVLEN
PSFSPMGVLLRMVHTALRFIPVISTVMLYHHPHPEEVTFHLYLVPSDCSIQKVPLRARKA
IDDEERKFQFVRIHKPPPLNPLYLGSRYIVSGSENLEIIPEELELCYRSPREPQLFSEFY
VGHWRSGIKLQVTNKKDGIVVWEALVKPGDLRRAAAQVPTGPIASPSPSKAPGSLHFVDR
YREQLVARVTSVDPILDKLHGQVLSEEQYEGVRAEVTKPDQMRKLFGFSRSWDWACKDRL
YQALKETHPHLIVELWERWGLEKTTGASCQTQKLSEHLL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtgacggatcttcacctaagcagcagagacaagaatcagagggaagctcccct
caggtagcacaggagaaacccctctgcctgtcttctccggccgctcccgacgacctgcac
gcggaatctctgaggcccgaagatgacttctggggccccacagggcctgtggctatcaag
gtggttgaccaagagaggagcctttaccgagttcacttccccatggccggctcctaccac
tggccccacacaggtctccactttgtggtgagagggcccgtgaccattgaaattgaattc
tgtgcctgggaccagttcctgaacaagaccatcccacgtcccaactggagagttgcagga
cctctctttgacatcaaggccgagccaggagtcgtggcagctgtgtacctcccctacttt
gtggccctccaagagagctgtgtggacatctcctggttccaagttgcccacttcaaagag
gaggggatggtcttggagaagccagccatggtggcgccatcttacgccgtcctggagaac
cccagcttctcccccatgggagtgctgctgagaatggtccacactgccctgcgcttcatt
cccgtcatctccacagtgatgctctaccatcacccccatcctgaggaggtcaccttccac
ctctacctggtccccagcgactgctccattcagaaggtgcccctgagagccagaaaggcc
atagatgatgaagaaaggaagttccaatttgtgcgaattcacaagccacccccactgaac
ccgctgtacttgggcagccgctacattgtgtctggttccgagaatctggaaattattcca
gaggagctggaactctgctatcggagtcccagagaaccccagctattctctgaattctac
gttggtcattggaggtcagggatcaagctgcaagtgaccaacaagaaagatgggattgtg
gtatgggaagccttggtgaaaccaggagacctcagacgtgcagctgctcaagtccctaca
ggccccatagcctcaccttcaccctcaaaagccccgggctcacttcacttcgtggaccgg
taccgggagcagctggtggctcgagtgacatcagtggaccccatcctggacaagctgcat
ggacaggtactgagtgaggagcagtatgagggggtgcgggctgaggtcaccaagccagac
cagatgcggaagctgttcggcttcagccggtcctgggactgggcctgtaaggaccgcctc
tatcaagccctgaaggagacccaccctcacctcattgtggagctctgggagaggtggggg
ttggagaagaccactggggcttcctgccaaactcagaagctgtctgaacacctgctctga
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