KEGG   Sus scrofa (pig): 110260638
Entry
110260638         CDS       T01009                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1 isoform X1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03420  Nucleotide excision repair
ssc04066  HIF-1 signaling pathway
ssc04110  Cell cycle
ssc04114  Oocyte meiosis
ssc04120  Ubiquitin mediated proteolysis
ssc04141  Protein processing in endoplasmic reticulum
ssc04310  Wnt signaling pathway
ssc04350  TGF-beta signaling pathway
ssc04710  Circadian rhythm
ssc05170  Human immunodeficiency virus 1 infection
ssc05200  Pathways in cancer
ssc05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110260638 (RBX1)
   04120 Ubiquitin mediated proteolysis
    110260638 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110260638 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    110260638 (RBX1)
   04350 TGF-beta signaling pathway
    110260638 (RBX1)
   04066 HIF-1 signaling pathway
    110260638 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    110260638 (RBX1)
   04114 Oocyte meiosis
    110260638 (RBX1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    110260638 (RBX1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110260638 (RBX1)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    110260638 (RBX1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    110260638 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssc04121]
    110260638 (RBX1)
   03400 DNA repair and recombination proteins [BR:ssc03400]
    110260638 (RBX1)
Enzymes [BR:ssc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     110260638 (RBX1)
Ubiquitin system [BR:ssc04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   110260638 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     110260638 (RBX1)
   Cul2 complex
     110260638 (RBX1)
   Cul3 complex
     110260638 (RBX1)
   Cul4 complex
     110260638 (RBX1)
   Cul7 complex
     110260638 (RBX1)
   Cul8 complex
     110260638 (RBX1)
   Cul9 complex
     110260638 (RBX1)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      110260638 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      110260638 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 110260638
NCBI-ProteinID: XP_020947122
LinkDB
Position
5:complement(7500492..7515388)
AA seq 120 aa
MRFGVSLWALHAQLQPAAILKNRTFTCPFLRKSCLEEQWNAVALWAWDIVVDNCAICRNH
IMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 363 nt   +upstreamnt  +downstreamnt
atgcgttttggcgtttcattgtgggcactgcatgctcagttacagccagcagccatattg
aagaatagaaccttcacctgtccattcctgcgtaaaagctgccttgaagagcagtggaat
gcagtagccctctgggcctgggatattgtggttgataactgtgccatctgcaggaaccac
attatggatctttgcatagagtgtcaagccaaccaggcgtcggctacttctgaagagtgc
accgttgcgtggggagtctgtaaccatgcttttcacttccactgcatctcccgctggctc
aaaacacggcaggtgtgtccgttggacaacagagagtgggaattccaaaaatatgggcat
tag

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