Sus scrofa (pig): 397210
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Entry
397210 CDS
T01009
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04360
Axon guidance
ssc05017
Spinocerebellar ataxia
ssc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
397210 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
397210 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
397210 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
397210 (TRPC3)
Ion channels [BR:
ssc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
397210 (TRPC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_4
Ank_5
PBC
Motif
Other DBs
NCBI-GeneID:
397210
NCBI-ProteinID:
NP_001139221
Ensembl:
ENSSSCG00000009092
UniProt:
C0JJ15
LinkDB
All DBs
Position
8:102129539..102206512
Genome browser
AA seq
847 aa
AA seq
DB search
MEGSPSLRRKTVMREKGRRQAVRGPAFMFNDRGTSLTAEEERFLDAAEYGNIPVVRKMLE
ESKTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDALLLAISKGYVRIVEA
ILNHPGFAASKRLTLSPCEQELQDDDFYAYDEDGTRFSPDITPIILAAHCQKYEVVHMLL
MKGARIERPHDYFCKCGDCTEKQRHDSFSHSRSRINAYKGLASPAYLSLSSEDPVLTALE
LSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILNGDLESAEPLEMH
RHKASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTVAIKCLVVLVVALGL
PFLAIGYWIAPCSRLGKVLRSPFMKFVAHAASFIIFLGLLVFNASDRFEGITTLPNITVI
DYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPREYILQLWNVLDFGMLSIF
IAAFTARFLAFLQATKAQQYVDSYVQESDLSEVTLPPEIQYFTYARDKWLPSDPQIISEG
LYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFILYS
YYLGAKVNAAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIGYVLYGIYNVTMVV
VLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFSLVPSPKSFVYFI
MRIINFSKCRRRRLQKDIEMGMGNSKSRLNLFTQSNSRVFESHSFNSILNQPTRYQIMKR
LIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQATEELAILIHKLSEKLN
PSMLRCE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggagggaagcccatccctgagacgcaagacagtgatgcgagagaagggtcggcgtcag
gctgttcgtggcccggccttcatgttcaatgaccgaggcaccagcctcacagccgaggaa
gaacgcttcctcgacgcagctgagtatggcaacatccccgtggtgcgaaagatgctggag
gaatccaagacgctgaacgtcaattgcgtagactacatgggccagaacgcgcttcagctg
gctgtgggcaacgagcacctggaggtgactgaattgctgctgaagaaggagaacctggcg
cgcataggcgacgccctgctgcttgccatcagcaagggctacgtgcgcatcgtggaagcc
attctcaaccaccccggtttcgcggccagcaagcgcctgaccctgagcccctgtgagcag
gagctgcaggacgacgacttctacgcctacgacgaggacggcacgcgcttctcccctgac
atcacccccatcatcctggcggcgcactgccagaaatacgaggtggtgcacatgctgctg
atgaagggcgccaggatcgagcggccgcatgactatttctgcaagtgtggggactgcaca
gagaagcagaggcacgactcgttcagccactcacgctcgaggatcaatgcctacaagggg
ctggccagcccagcgtacctgtctttgtccagcgaggaccctgtgctcaccgccctggag
ctcagcaacgagctggccaaattggcaaacatagagaaggagttcaagaatgactatcgg
aagctctccatgcaatgcaaagactttgttgtgggtgtgctggatctttgccgagactcg
gaagaggtagaagccatactgaatggagatctggaatcggccgagcctctggagatgcat
aggcataaagcttcactgagtcgtgtcaaacttgccatcaagtatgaagtcaaaaagttt
gtggctcaccccaactgccagcagcagctcttgacaatctggtacgagaatctctcaggc
ctgcgggaacagacggtagctatcaagtgtctggtggtgctggtcgtggccttgggcctt
ccgttccttgccatcggctactggatcgcaccttgcagcaggctggggaaagttctacgg
agtccttttatgaagtttgtggcacatgctgcttctttcatcatcttcctaggcctgctt
gtgttcaatgcctcagacagatttgaaggcatcaccacgttgccaaatatcactgttatt
gactatcccaaacagatcttcagggtgaaaaccacccagttcacatggacggaaatgcta
attatggtctgggttctcggaatgatgtggtctgagtgcaaggagctctggctggaagga
cccagggaatacattttgcagttgtggaatgtcctagacttcggaatgctctccatcttc
atcgcggctttcacggccagattcctggctttccttcaggcaacaaaggcacagcagtat
gtggacagttatgtccaagagagtgacctcagtgaagttacacttccaccagagatacag
tatttcacttatgcccgagataaatggcttccttctgaccctcaaatcatatctgagggc
ctctatgccatagctgttgtgctcagcttttctcggattgcctacatcctccccgcgaat
gagagcttcggccccttgcagatctctcttggaaggactgtgaaggacatattcaagttc
atggtcctctttattatggtgtttcttgcctttatgattggcatgttcatactgtattct
tactaccttggggctaaagtaaatgctgcttttaccactgtagaagaaagtttcaagact
ttgttttggtcaatatttggcttgtctgaagtgacttccgttgtgctcaaatatgatcac
aaattcatagagaatattggatatgttctttatggaatatacaacgtaactatggtggtc
gttttactcaacatgctcattgctatgattaatagctcatatcaagaaattgaggatgac
agtgacgtagaatggaaatttgcacgctcaaaactttggttatcttattttgatgatgga
aagacattacctccacctttcagtctagttcctagtccaaagtcatttgtttatttcatc
atgaggattattaacttttccaaatgcagaaggagaaggctacagaaggatatagaaatg
ggaatgggtaactcaaagtccaggttaaacctcttcactcagtctaactcaagagttttt
gaatcacacagttttaacagcattctcaatcagccaacacgttatcagataatgaaaaga
cttataaaacgatatgttttgaaagcacaagtagacaaagaaaatgatgaagttaatgaa
ggtgaattaaaagaaatcaagcaagatatctccagccttcgctatgaacttttggaggac
aagagccaagcaactgaagaattagccattctaattcataaactcagtgagaaactgaat
cccagcatgctgagatgtgaatga
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