Sus scrofa (pig): 397346 Help Entry 397346            CDS       T01009                                  Symbol MMP13 Name (RefSeq) collagenase 3 isoform X1   KO K07994   matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-] Organism ssc  Sus scrofa (pig) Pathway ssc04657   IL-17 signaling pathway ssc04926   Relaxin signaling pathway ssc04928   Parathyroid hormone synthesis, secretion and action Brite KEGG Orthology (KO) [BR:ssc00001]  09150 Organismal Systems   09151 Immune system    04657 IL-17 signaling pathway     397346 (MMP13)   09152 Endocrine system    04926 Relaxin signaling pathway     397346 (MMP13)    04928 Parathyroid hormone synthesis, secretion and action     397346 (MMP13)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:ssc01002]     397346 (MMP13) Peptidases and inhibitors [BR:ssc01002]  Metallo peptidases   Family M10    397346 (MMP13) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_M10 Hemopexin PG_binding_1 Reprolysin_3 Reprolysin_4 Reprolysin_5 DUF4953 Motif Other DBs NCBI-GeneID:  397346 NCBI-ProteinID:  XP_003129856 Ensembl:  ENSSSCG00000014988 UniProt:  A0A481A6Z6 A0A8D1XG17 F1SV56 LinkDB All DBs Position 9:complement(33549003..33616700) Genome browser AA seq 470 aa AA seqDB search MHPGVLAAFLFLSWTHCWSLPIPNDSDGDLSEEDFQLAENYLKSYYYPMNPAGILKKTAA SSVVDRLKEMQSFFGLEVTGKLDDNTLDIMKKPRCGVPDVGEYNVFPRTLKWSQMNLTYR IVNYTPDLTHSEVEKAFKKAFKVWSDVTPLNFTRIHNGTADIMISFGTKEHGDFYPFDGP SGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMF PIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPKHPKTPDKCDPSLSLDAITSLRGETL IFKDRFFWRLHPQQVDAELFLTKSFWPELPNRIDAAYEHPTRDLIFIFRGRKFWALNGYD ILEGYPKKISELGFSKEVKRISAAVHFEATGKTLFFSGNQVWSYDDTNQRMDKDYPRLIE ENFPGIGDKVDAVYEKNGYIYFFNGPIQFEYSIWSNRIVRVMPTNSLLWC NT seq 1413 nt NT seq  +upstreamnt  +downstreamnt atgcacccaggtgtcctggctgccttcctcttcttgagctggacccactgttggtccctg cccattcccaatgacagtgacggtgatttgtccgaggaagacttccagttggcagagaac tacctgaaatcatactactaccctatgaatcctgctggaatcctgaagaaaacggcagca agctccgtggttgacaggcttaaagaaatgcagtcttttttcggcttagaggtgactgga aagcttgatgataacaccttggacatcatgaaaaaaccaagatgtggggtccctgatgtg ggtgaatacaatgtttttcctcgtactctcaaatggtcccaaatgaacttaacctacagg attgtgaattacacgcctgatttgactcattctgaagttgaaaaggcattcaaaaaagcc ttcaaagtttggtctgatgtgacacctctgaattttaccagaattcacaatggtactgct gacatcatgatctcttttggaactaaagagcatggagacttctacccatttgatggacca tctggtctgttggctcatgcttttcctcccggaccaaattatggaggagatgcccatttt gatgatgatgaaacctggacaagtagttccaaaggctacaacttgtttcttgttgctgcc catgagtttggccattccttaggtcttgaccactccaaggacccaggagccctcatgttt cctatctatacctacactggcaaaagccactttatgcttcctgatgatgatgtacaaggg atccagtctctctatggtccaggagatgaagaccccaaccctaaacatcccaaaacacca gacaaatgtgatccttcattatccctggatgccattaccagtctccgaggagaaaccctg atctttaaagacagattcttctggcgtctgcatcctcagcaggttgatgctgagctgttc ttgacaaaatcattttggccagaacttcccaaccgtatcgatgctgcatatgagcacccc acccgtgaccttatcttcatctttagaggcagaaaattttgggctcttaatggttatgat attctggaaggttatcctaaaaaaatatctgaactgggattttcaaaagaggttaaaagg ataagcgcagccgttcactttgaggctacagggaagactctcttcttctcaggaaaccag gtctggagctatgatgatactaaccagaggatggataaagactaccccagactaatagaa gagaacttcccaggaattggtgataaagtagatgctgtctacgagaaaaatggttatatc tattttttcaacggtcccatacagtttgaatatagcatctggagtaaccgtattgtccgc gtcatgccaacaaattccctattgtggtgttaa

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