Sus scrofa (pig): 397673
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Entry
397673 CDS
T01009
Symbol
HMGCS2
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, mitochondrial precursor
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00280
Valine, leucine and isoleucine degradation
ssc00650
Butanoate metabolism
ssc00900
Terpenoid backbone biosynthesis
ssc01100
Metabolic pathways
ssc03320
PPAR signaling pathway
Module
ssc_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
397673 (HMGCS2)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
397673 (HMGCS2)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
397673 (HMGCS2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
397673 (HMGCS2)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
397673 (HMGCS2)
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Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
397673
NCBI-ProteinID:
NP_999545
Ensembl:
ENSSSCG00000006716
Vega:
OTTSUSG00000000512
UniProt:
O02734
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All DBs
Position
4:101420941..101440302
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AA seq
508 aa
AA seq
DB search
MQRLLTPVRQVLRVKRAMQEASFMPPLLPPAAHQRFSTVPAVPVAKADTWPKDVGILALE
VYFPAQYVDQTDLEKFDNVEAGRYTVGLGQTHMGFCSVQEDINSLCLTVVQRLMERTQLP
WDSVGWLEVGTETIIDKSKSVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWV
ESSAWDGRYAVVVCGDIAVYPRGNSRPTGGAGAVAMLVGPEAPLALERGLRGTHMENAYD
FYKPNATSEYPLVDGKLSIQCYLRALDRCYTLYRQKIEKQWKQAGIERHFTLDDLQFMIF
HTPFCKLVQKSLARLMFSDFLLADSDTQSSLYKGLEAFRGQKLEDTYANKDIEKAFQKAS
LDLFNKKTKPSLYLSLHNGNMYTSSLYGCLASLLSQCSAQDLAGSRIGAFSYGSGLAASF
YSLRVSQDASPGSPLEKLVSSVSDLPERLASRKRVSPEEFTEIMNQREQYYHKVNFTPPG
DPNSLFPGTWYLERVDELYRRKYARHLV
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcctgttgactccagtgaggcaggtcttgcgagtgaagagagcgatgcaggaa
gcttccttcatgccgcctctcctgcctccagcagcccaccaaaggttttctacagtccct
gccgtccccgtggccaaagcggatacttggccaaaggatgtgggcatccttgccctggag
gtctatttcccagcccaatatgtggaccaaacagacctggagaagtttgacaatgtggag
gcagggaggtacacagtgggcttgggccagacccacatgggcttctgctccgtccaggag
gacatcaactccttgtgcctgacggtggtgcagcggctgatggaacgcacgcagctccca
tgggactctgtgggctggctggaagtgggcactgagaccatcattgacaagtccaagtct
gtcaaaaccgtgctcatggagctcttccaggactcaggcaacactgacatcgagggcata
gataccaccaatgcctgctatggtggcacagcctccctcttcaacgctgccaactgggtg
gagtccagcgcctgggatggtcgctatgcggtagtggtctgtggagacatcgctgtctac
cccaggggaaactcccgccccacaggcggggctggagccgtggccatgctggttgggcct
gaggcccctctggccttggagagagggcttagaggaacccacatggagaatgcgtatgac
ttctacaagccaaatgccacttctgagtacccactggtggatgggaagctctccatccag
tgctaccttcgggccctggaccgatgctacacattataccgtcaaaagatcgagaagcag
tggaagcaagctggcatcgagcgacatttcactctcgacgatttacagtttatgatcttc
cacacacccttctgcaagttggtccagaaatccttggctcgcctgatgttcagtgacttc
ctgttggccgacagcgacacccagtccagcctctacaaggggctggaggccttcagggga
caaaagctggaagacacctacgcaaataaagacatagaaaaggcatttcaaaaggcctct
ctggacttgttcaacaagaaaaccaagccctccctctacctctccctgcacaacgggaat
atgtacacctcatccctgtatggatgcctggcctcacttctgtcccagtgctctgcccaa
gacttggctggttccaggattggtgccttctcttatggctctggcttggcagcaagtttc
tattcacttcgagtgtcccaggatgcttctccgggctcccccctggagaagctggtatcc
agtgtgtcagacctgccagaacgtctcgcctcccggaagcgtgtctcccctgaggagttc
acggaaataatgaaccaaagagaacaatactaccacaaggtgaatttcacaccacctggt
gacccaaacagccttttcccaggcacctggtacctggagcgagtggatgagctgtatcgc
cggaagtatgcccggcatctggtctaa
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