Sus scrofa (pig): 404704
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Entry
404704 CDS
T01009
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4 precursor
KO
K06454
T-cell surface glycoprotein CD4
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03250
Viral life cycle - HIV-1
ssc03260
Virion - Human immunodeficiency virus
ssc04060
Cytokine-cytokine receptor interaction
ssc04514
Cell adhesion molecule (CAM) interaction
ssc04612
Antigen processing and presentation
ssc04640
Hematopoietic cell lineage
ssc04658
Th1 and Th2 cell differentiation
ssc04659
Th17 cell differentiation
ssc04660
T cell receptor signaling pathway
ssc05135
Yersinia infection
ssc05166
Human T-cell leukemia virus 1 infection
ssc05170
Human immunodeficiency virus 1 infection
ssc05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
ssc05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
404704 (CD4)
03260 Virion - Human immunodeficiency virus
404704 (CD4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
404704 (CD4)
04514 Cell adhesion molecule (CAM) interaction
404704 (CD4)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
404704 (CD4)
04612 Antigen processing and presentation
404704 (CD4)
04660 T cell receptor signaling pathway
404704 (CD4)
04658 Th1 and Th2 cell differentiation
404704 (CD4)
04659 Th17 cell differentiation
404704 (CD4)
09160 Human Diseases
09161 Cancer: overview
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
404704 (CD4)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
404704 (CD4)
05170 Human immunodeficiency virus 1 infection
404704 (CD4)
09171 Infectious disease: bacterial
05135 Yersinia infection
404704 (CD4)
09163 Immune disease
05340 Primary immunodeficiency
404704 (CD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ssc04090
]
404704 (CD4)
CD molecules [BR:
ssc04090
]
Proteins
404704 (CD4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CD4-extracel
C2-set
Tcell_CD4_C
ig
Ig_3
Ig_2
V-set
I-set
Ig_5
Receptor_2B4
Myc_target_1
TMEM52
Motif
Other DBs
NCBI-GeneID:
404704
NCBI-ProteinID:
NP_001001908
Ensembl:
ENSSSCG00000000687
Vega:
OTTSUSG00000001642
UniProt:
I3L556
LinkDB
All DBs
Position
5:complement(63892129..63918547)
Genome browser
AA seq
457 aa
AA seq
DB search
MDPGTSLRHLFLVLQLAMLPAASGTQEKYLVLGKAGDLAELPCHSSQKKNLPFNWKSSNQ
TKILGGHGSFWHTASVTELTSRLDSKKNMWDHGSFPLIIKNLEVTDSGIYICEVEDKRIE
VQLLVFRLTASVTRVLLGQSLTLTLEGPSGSHPTVQWKGPGNKSKNDVKSLLLPQVGLED
SGLWTCTVSQDQKTLVFRSNIFVLAFQKVPSTVYVKEGDQVVLSFPLTFEAESLSGELMW
RQTKGASSPQSWITFSLKDRKVTVQKSLQNLKLRMAEKLPLQITLLQALPQYAGSGNLTL
VLPEGRLHREVNLVVMRATQSKNEVTCEVLGPTPPKVVLSLKLGNQSMKVSDQQKLVTVL
DPEAGMWRCLLRDKDKVLLESQVEVLPTAFTRAWPKLLAFVIGGIIGLLFLAGFCIVCVK
CWHRRRRAERMSQIKRLLSEKKTCQCAHRQQKNYSLT
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggacccaggaacctctctgaggcacctgttcctggtgctgcaactggcgatgctccca
gctgcatcgggcactcaggaaaaatatctggtgctgggtaaggcaggagatctcgcagag
ctgccgtgccactcttcccagaagaagaacctacctttcaattggaaaagttctaaccag
accaagattctgggcggtcatggcagcttctggcacacagcctcagttaccgagttgacc
tctcgcctcgattcgaaaaaaaacatgtgggaccatggatcctttcccctgatcatcaag
aatcttgaagtaaccgactccgggatttacatctgcgaagtggaagacaagaggatagag
gtgcaattgctggtgttcagactgactgccagtgtcacccgcgtgctgctggggcagagc
ctgaccctgacgctggagggcccctctgggagtcaccctacagtgcaatggaaaggtcca
gggaataaaagcaagaatgacgtcaagagcctgttgctgccccaggtggggttggaggac
agtggcctctggacatgcactgtctcccaggaccagaagacactggtgttcaggagtaac
atcttcgtgctggccttccagaaggttcctagcacagtctatgtgaaggaaggggaccag
gtggtgctctccttcccactcaccttcgaagccgagagcctgagcggggagctgatgtgg
cggcagacgaagggggcttcctccccccagtcctggatcaccttctccctgaaggacagg
aaggtgactgtgcaaaagtctctccagaacctcaagctccggatggcggagaagctcccg
ctccagatcactctgctccaggccttgcctcagtacgcaggttctggaaacctgaccttg
gttctccctgaggggaggctgcacagggaagtgaacctcgtggtgatgagagcgactcag
tctaagaacgaagtgacctgtgaggtgctgggacccacccccccgaaggtggtgctgagc
ttgaagctggggaaccagagtatgaaagtctcagatcagcagaagctggtgacggtgctg
gaccctgaggcagggatgtggcggtgtctactgagggacaaagacaaagtcctgctggaa
tcccaggtcgaggttctgcccacagcattcacgcgggcctggccgaagctcctggccttt
gtgataggggggatcataggccttctgtttctcgctgggttctgcatcgtctgtgttaaa
tgttggcaccgcaggcgccgggcggagcggatgtctcagatcaagagactccttagtgag
aagaagacctgccaatgcgcccaccggcaacagaagaactattccctcacctga
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