Scomber scombrus (Atlantic mackerel): 133976476
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Entry
133976476 CDS
T10651
Symbol
raph1b
Name
(RefSeq) ras-associated and pleckstrin homology domains-containing protein 1b isoform X1
KO
K23488
Ras-associated and pleckstrin homology domains-containing protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
133976476 (raph1b)
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
133976476 (raph1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA_2
RA
PH
PI3K_rbd
PH_11
RBD
Motif
Other DBs
NCBI-GeneID:
133976476
NCBI-ProteinID:
XP_062270676
LinkDB
All DBs
Position
24:complement(8656816..8696581)
Genome browser
AA seq
1548 aa
AA seq
DB search
MEQVSDDELDHGAEEDSDKEDQDLDKMFGDWLGELDKLTQSLDDGKPQKTLQKPPLRQET
NMANFSYRFSMYNINEALNQGDTVDLDALMADLCSIEQELNTISKPNSTSRSQSKRGPGG
RSASTKHTGTSGGGSSGGSTSSSTRASPANTVRGASASARPAASNISLDDITSQLEKASL
SMDEAARQTSSSSSSSSSSYSSSTLRRPSSGSSGGGQQQQHRRTGSVGAVSEQEAPSQRS
SVNSACASASSMDSLDIDKVMAGGEAEGRSSPSTQGQNQTSTEHVTLRRAHGKTSRRQLD
FATREGEVDRATHSYLDRETSLILKSIAGKPSHLLTKEEQAAKLKAEKIRVALEKIKEAQ
VKKLVIRVHMSDESSKTMMVDERQTVRQVLDSLLDKSHCGYSPDWSLVETINELQMERIF
EDHENLVENLLNWTRDSHNKLMFIERIEKYALFKNPQNYLLGRKETSEMADRNKEALLEE
CFCGGSVSVPEIEGILWLKEDGKKSWKKRYFLLRASGIYYVPKGKAKASRDLVCFLQLDH
VNVYYGQDYRSKYKAPTDYCLALKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKYGK
QLYVNYQEAMKRTEAAYDWSSLSTSSIRSGSSSASIPESQSNHSGHSDSGVETGSSHGRS
QSVVSSIFSEAWKRGTQIEESSKHMRMEASRGATLPHPSHSHRHHSQHSVDHLVLTPPPQ
PQVQPPPQPLQQHPPQPQHPPQPQHPPVQPQTLTQPQHQHLPPQPQSPQQAPQPPAPTPT
PPPPPPQSPQHPQQPPQSQQQQQQPPPISNYEMPPPPPQQQEEQQPAAPPPPPPPPPPPP
PPPPVQTVSHHSAAPTMYKFSTINRLQNQKASQAANHHKLPSHLYATAHQVLPPIPTSPT
VLASVKPPINVNHIAARTNVPPPPPPPPPPPPSMPMPGSAMAVLRLGPPSPATPPAFTPP
PPGPPPAPQTNGLAFPPPPPPPPPPAPTPMSQPVYPVVLKQTLKERFPSPPRDLLSPDGG
LEESPPPAPAPPPPPPPPPPPPPPPPPPQQFPVPAQFPPPPGPPPPAPPKSFTPGFVPHT
APKPTSPVIPFPPAPPPAAMGGPPPPPPPPPPAPFKKQFSLQAGHTASQPPPTLPKQHSL
SKPPPISTGAPPTMSLVKQLASQFPGSSSQVANHTESPKAPLSPPAVKTKPKWQPGGGQQ
HQSPEFPPPPPDSSAGFPAPPPPPPPPPAPVTGPTPPPPPLPPGNLGSPTRRSPCGPAGF
LGKKPPPTPQRNSSMKADSSASYEESRRNLLSKFAPQSSTSPSPPCPVSSSTGSPSKDPS
AGPPAPPKPGKLNLSNLPLALQAKVSQAKPTGGDFPSPPPECAYFPPPPPASELFPPPPP
PGSDAPSGGPPRVAVVNPQPQAPPPPPPVSLVSNSSWGKSSLKKTAPPTLVRRSNTTPEP
PPLSPTPQNPPPTSPKGSSGQPNFLDDLHRTLKRKSVGRQSSVNSAGLSAGTMDDMALPP
PPPELLDQGMQSNGGNGGYMSGNISGYATLRRGPPPAPPKRGDATKLT
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtatcagatgacgagctggaccatggagcggaggaggacagcgataaggag
gaccaggacctggacaagatgtttggagactggctaggagagctggacaagctcacacag
agtttggatgatggcaagccccagaaaacactgcagaagcctccactcaggcaggagaca
aacatggccaacttctcctaccgcttctccatgtacaacataaacgaggcgttgaaccaa
ggagacacagtggacctggatgccctgatggctgacttgtgctctatcgaacaggagctc
aataccatttccaaaccaaactctacgtcacgcagccagagcaagcgtggccccggggga
cgcagtgccagcaccaaacacacaggcaccagtggaggtggaagcagtggaggaagcacc
agtagcagcacccgagcatcgccggccaacacggtgcgaggcgccagcgccagcgcccgt
cccgcggcctccaacatctccctggatgacatcacctctcagctggagaaggcctctctc
agcatggacgaagcggcccgccagacatcctcctcttcctcctcctcctcgtcttcttac
tcctcctccacgctccggcggccatcgtcggggtcgtccggaggcggtcagcagcagcag
caccggaggacggggtcagtgggtgccgtcagcgagcaggaagccccgtcccagcggtcc
agtgtaaactcagcatgtgcctcagcgtccagtatggactccctggacattgataaagtg
atggcaggaggagaggcggagggcaggagcagcccgagcacacaaggacaaaaccagacc
agcacagagcatgtcacactgcgacgggcccacggtaagacatccaggcggcagcttgac
tttgccacacgagagggtgaagtggatcgggccactcactcctatctggaccgagaaacc
tcgctcattctgaaaagcatagctggaaagccttctcacctcctgaccaaggaggagcaa
gctgccaaattgaaggcagagaagatccgagtcgccctggaaaaaatcaaagaggcgcag
gtcaaaaagctggtgatcagggttcacatgtcagacgagagctccaagaccatgatggtg
gatgagaggcagacagtcaggcaggtgctggacagcctgctggataagtcacactgtggc
tacagccctgactggtctcttgtggaaaccatcaatgaactacagatggagcgcattttt
gaggatcacgagaacttggtggagaatctattaaactggacacgagacagccacaacaag
ctcatgttcattgaacgcatcgagaaatatgctctgttcaagaacccccagaactatttg
ttggggcggaaggagacatcagagatggctgacaggaataaagaggctttactggaggag
tgtttctgtggcggctcggtgtctgtgccagagattgaggggatcctctggctgaaggaa
gatgggaagaagtcatggaagaaacgttacttcctcctcagggcttcagggatctactat
gtcccaaaaggcaaagctaaggcgtccagagatcttgtgtgcttcctgcagttggatcat
gttaacgtgtattacggtcaggactaccgcagcaaatacaaggctcccactgactactgc
ttggccctgaagcatccacaaatccagaagaagtcacagtatattaagtatctgtgctgt
gatgatgtcaggaccctccaccaatgggtgaatggaattcgcatcgctaagtatggcaag
cagctatatgtgaactaccaggaggccatgaagaggacagaggcggcttacgattggtcc
tctctctctacctccagcatccgatcaggctccagttctgcaagcattcctgagtcccag
tctaatcattcaggccattcagacagtggagttgagacaggctcctctcatggccggtcc
cagagtgtggtgagctccattttctctgaggcctggaagagaggcacccagatagaggaa
agctccaagcatatgagaatggaggcatccagaggggccaccctgccgcacccttcccac
agtcaccggcatcacagccagcattcagttgatcacctggtgctgacgccccctccccag
ccacaggtgcagcctcccccccagcccctgcaacagcacccaccacagcctcaacaccca
ccacagcctcaacacccaccagtgcagcctcagacactgacccagccacaacaccagcac
ctgcctccccagcctcagtctcctcaacaggccccgcagccgccagcaccaacaccaaca
ccaccaccaccaccaccacagtcgcctcagcaccctcagcaaccaccccagtcacaacag
caacaacagcagccgccgcccatcagcaactacgagatgccaccgccaccaccgcagcag
caggaggagcaacaaccggctgctcctcctcccccacctcctccgccacctcctcctcct
cccccacccccggtccaaaccgtgtcacaccactcagcggctcccaccatgtacaagttc
agcaccatcaaccgactgcagaaccagaaggcctcccaggctgccaaccaccacaagctg
cccagtcatctctatgcaacagctcaccaagttctgcccccaattccaacatcgcccaca
gtactggcatctgtcaaaccacctatcaatgtgaaccacattgcagcaaggactaatgtc
ccgcctccccctccacctcctcctcccccgccaccatccatgccaatgcctgggtcagcc
atggctgtgttgaggctgggccctcccagtccagccaccccacctgccttcacccctcca
cccccgggtcctccacctgctccacagaccaatggactagcatttcctcctcctcctccc
cctccaccccctcccgccccgactcccatgagccagcctgtttatcccgtcgttctgaag
cagacactgaaggaacggtttcccagccctccacgggacctgctgtctccagacggaggc
cttgaggagtccccaccacccgcacctgctccgccacccccacctcctccacctccacct
ccgccgccacctcctcctcctccccagcagttcccagtgccagcccagttcccacctccg
cctggaccccctccaccagcaccacccaagtccttcaccccaggctttgttcctcacact
gcacccaaacccacgtcaccggtcatccccttcccacccgcgccgcctcctgctgccatg
ggtggcccaccaccacccccaccccctcctccacctgcaccgttcaagaagcagttcagc
ctccaggcgggccacaccgccagccagccccctcccactctgcccaagcagcacagcctg
tctaagccaccgcccatttccacgggagctcctccaaccatgtctttggtgaaacagctt
gcaagtcagtttccaggatcttcatcccaagtagccaatcatacagagagccccaaagcc
cccctctccccacctgcagtcaagaccaaaccgaaatggcagcctggtggtggccagcag
caccagtctccagagtttcctcctcctcctccagacagcagtgctggcttccctgcccct
cctcctcctccgccacctcctccagcccctgtcaccggcccaaccccacctcctcctccc
ctccctcctggaaacctgggctcacccacgaggaggtcaccctgtggtcccgctggtttt
ttgggaaagaagcctcctcccaccccccagaggaactccagcatgaaggccgactcctca
gcctcttatgaggaatcaagaaggaacttgctgagcaagtttgctccccagagcagcacc
tctccttcccccccatgtccagtctcctcatccactggatccccatccaaggacccgtca
gctggaccccctgctcccccaaaaccgggtaagctcaacctgtccaacctgccattggca
ctccaggccaaagtgagccaggcaaagccaactggtggcgacttcccttctccaccacct
gaatgcgcctacttccctcctcctcccccagcctctgagctcttcccccctcctccacct
cctggcagtgacgcccctagtggaggaccacctagggtagctgtggtcaacccccagccc
caggctcccccacctcctccacctgtctcccttgtcagcaactcttcctggggcaagagc
tcactgaaaaagactgctccacccacactcgtgcggcgtagcaacaccaccccggagccc
cctccactctcgccgacaccacagaaccctccacccacctcccccaagggcagctcaggc
cagcccaacttcctagacgacctccaccggactctgaagcgaaagtcagtgggtcgccag
agttctgtcaactctgctggcctctctgcagggactatggacgacatggcactgcctccg
ccgccccctgagctgctggaccagggaatgcagagcaacggaggaaacggtggctacatg
tccggaaacatctcaggctatgcaacactacgacgaggacccccgcctgcaccgcctaaa
cggggggacgccaccaaacttacttga
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integrated database retrieval system
