Scomber scombrus (Atlantic mackerel): 133976788
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Entry
133976788 CDS
T10651
Name
(RefSeq) E3 SUMO-protein ligase EGR2-like
KO
K12496
early growth response protein 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
133976788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133976788
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
133976788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
DUF3446
C2CH-3rd_BIRD-IDD
zf-C2H2_STOP2_C
zf-C2H2_11
zf-C2H2_15
Trypan_PARP
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
133976788
NCBI-ProteinID:
XP_062270967
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MAAKLVDEVSASLSSLVDSLHSSEGGLLVFKEEAVGGEDEYGGKHDEDEDGDLSASHYVA
TLRTHPLAFTGRFSVEPRGAGGGGGAGGGAGGGPWSSSVDIINVVSADIAAAASPSASPD
IYAGGGGGDGTMAHGPPDITHMYAHPHPHPHPHPHSHPAPSYSCSGDMYQDQSGYLATSY
HPPPSYSSAPKPSVDAPPLLSLMPEYGGFYPQSCQRDLQAAFPERKSLPYPLDSLRVPPP
LTPLNTIRNFTLGAPSSAADGPLAAAFPTHQNLPLPLRPILRPRKYPNRPSKTPVHQRPY
PCPAESCDRRFSRSDELSRHLRIHTGHKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFSC
DQCGRKFARSDERRRHMKIHLRQKEKKSPAS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaaattagtggatgaagtttctgcgtctctcagcagtctggtagacagtctt
cactcctctgagggggggctgctggtgtttaaagaagaggcagtaggaggggaggatgag
tatggagggaagcatgatgaagatgaagacggtgacctctctgcatcacactacgtggcc
actttacgcacgcaccctttggcgtttaccggtcggttctcggtggagccccggggtgca
ggaggaggaggaggtgcaggaggaggtgcaggaggaggaccgtggagctcatcagtggac
atcatcaacgtggtcagtgctgacatcgctgcagctgcttctccatcagcatcacctgat
atttacgcaggaggaggaggaggagacggcaccatggcgcacgggccaccagacatcacc
cacatgtatgcacaccctcacccccacccccacccccacccccactcccaccctgcaccc
tcctactcctgcagcggggacatgtatcaggaccaatctggatacttggccacctcttac
catccgcccccgtcctacagctcagcccccaaaccttcagtagacgcccccccgctgctc
tccctcatgccggagtacggaggcttctacccgcagagctgccagagagacctccaggct
gctttcccggagaggaaatccctcccgtacccgctggactctctccgcgtgcctccacct
ctcactcctctcaacaccatcaggaactttaccctcggtgcgccttcatcggccgctgat
ggcccgctcgccgcagctttccctacccaccagaacctcccactcccactcaggcccatc
ctcagacctagaaagtacccgaatcgacccagtaagacaccagtgcaccagaggccgtac
ccgtgtcctgcagagagctgcgacaggaggttctccagatcggacgagctgagccggcac
ctgcgcattcacaccggacacaaaccgttccagtgccggatctgcatgaggaacttcagc
cgtagcgatcacctgaccacgcacatccgcacgcacaccggggagaaacccttctcctgt
gatcagtgcgggaggaagtttgccaggagtgatgagaggaggagacacatgaagatccac
ctcaggcagaaagagaagaagtcacctgcgtcctaa
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