Scomber scombrus (Atlantic mackerel): 133977018
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Entry
133977018 CDS
T10651
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04620
Toll-like receptor signaling pathway
ssco04621
NOD-like receptor signaling pathway
ssco04622
RIG-I-like receptor signaling pathway
ssco05168
Herpes simplex virus 1 infection
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133977018
NCBI-ProteinID:
XP_062271146
LinkDB
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Position
Unknown
AA seq
595 aa
AA seq
DB search
MSAGRSADGREVQIPLQQVAPSLAPPLAVAPPISPPPHRPANPWPPNDLALPPGVPAGFL
PLHGGFRDLFVEAPEAKYCCESCRLVLCQPRQTECGHRFCQSCITDILSRPNPVCPADME
PLFNNKIFRDVCCHREIMALKVYCRSQSNGCQEQMSLQQIPDHLNVCPFFEVPCPLGKCK
ERMMRKEIPDHLNRKCKHRETTCDFCMTKMPLTDLQKHKETVCPAFPVSCPNLCSFNSLP
RSELSTHQHDCPKAQVSCQFHRYGCTFKGLNQDMRQHESTFAAEHLRMMANRNASLENKV
EDVKAELLDRYKVLPALSSRLSELENQNDELREKNRQMEQKLATMQKLMSSHSEKLLEVE
LELRSLRQLRDEVENLRGSLENVRTRLATLEQGGRSGTGSTTHTLASMETQLNRHDDMLS
MHEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYK
MCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFK
PDPNSSSFRRPAAEMNIASGCPLFVSQSVLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggggaggagtgctgacgggagggaggtgcagattcccctccagcaggtggcg
ccctccctggccccgcccctcgccgtggctcctcccatcagcccgcctcctcacagacca
gccaatccctggcctcccaacgacctcgccctcccaccaggtgtccctgcaggcttcctt
cctcttcatggaggcttcagagatctgtttgtagaagctcctgaagctaaatactgctgt
gagtcctgcagactggtcctctgccagcccagacagactgagtgtggacacaggttctgc
cagagctgcatcacagacatcctcagtcgtcctaacccggtgtgtcccgctgacatggaa
ccgctgttcaataacaagatcttcagagacgtttgctgtcatcgggaaatcatggcgctg
aaggtttactgtcgcagtcagagcaacggctgtcaggagcagatgagtctccagcagata
cctgatcacctgaacgtgtgtccattcttcgaggttccgtgtccgttggggaaatgtaaa
gaacgaatgatgaggaaggagattcccgaccacctgaaccgcaaatgtaaacacagagag
accacctgcgacttctgcatgaccaaaatgcccctgactgacctgcagaaacataaggag
acggtgtgtccggcgttcccggtgtcgtgtccaaacctctgctccttcaattcgctgccg
cggagcgagctctccactcaccaacacgactgtcccaaagctcaggtgagctgtcagttc
catcgctacggctgcacctttaagggtttgaatcaggacatgaggcaacatgagtccacc
tttgcagctgaacacctgagaatgatggccaatagaaacgcttccttagagaacaaggtg
gaggatgtcaaagctgaactgttggacaggtataaggtgcttcctgctctcagcagtcgt
ctctctgaactcgagaaccagaacgatgagctgagagagaagaaccgccagatggagcag
aaactggccaccatgcagaaactgatgagctctcactcagagaagctcctggaggtggag
ctcgagctgcgttctctccgtcagctcagagacgaggtagagaaccttcgaggatcacta
gagaacgtccggacaaggctggcgactctggaacaaggaggacgcagtggaactggatcc
acgacacacactctggcgtccatggagactcagctgaatcgccatgacgacatgctgagt
atgcacgagattcgattggctgacatggacctgcgtttccaggttctggaaacagcgagc
tacaacgggacactgatctggaagattcgtgactataagagacggaaacaggaagcagtg
gcggcgaagacgctgtcgctgtactcacagccgttttacacgggatacttcggatataag
atgtgtgctcgtgtctacctgaatggagacggcatgggcaagggaacgcacctgtcgctg
ttcttcgtggtgatgaggggcgagtacgacgccctgttgccctggccctttaaacagaag
gtcactctgatgctgatggatcagggtccatccaggaaacacttaggtgatgcctttaaa
ccagatccaaacagcagcagcttcagacgtccggcagcagaaatgaacatcgcctctggt
tgtcctctgtttgtgtctcaaagtgtccttgagaccggcagctacatcaaggacgacacc
attttcatcaaggttaccgtggatacctctgaccttcctgacccttga
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