Scomber scombrus (Atlantic mackerel): 133977018
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Entry
133977018 CDS
T10651
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04620
Toll-like receptor signaling pathway
ssco04621
NOD-like receptor signaling pathway
ssco04622
RIG-I-like receptor signaling pathway
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
133977018 (traf3)
04621 NOD-like receptor signaling pathway
133977018 (traf3)
04622 RIG-I-like receptor signaling pathway
133977018 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133977018 (traf3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
NOCA1_mid
Sina_ZnF
CEP89
zf-C3HC4_2
CCDC39
CCDC113_CCDC96_CC
ATG16
KIF9
zf-TRAF_2
zf-RING_4
Seadorna_VP6
Fzo_mitofusin
Astrin_C
PUMA_CC
AAA_13
DASH_Dad2
CCDC192
DUF8567
Rod_CreS
DUF1664
AIP3
GAS
DUF724
CENP-F_leu_zip
T4SS_LegC2C7
NDC80_loop
Baculo_PEP_C
HAUS1
FlaC_arch
Fez1
FapA
KxDL
MctB
Motif
Other DBs
NCBI-GeneID:
133977018
NCBI-ProteinID:
XP_062271146
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MSAGRSADGREVQIPLQQVAPSLAPPLAVAPPISPPPHRPANPWPPNDLALPPGVPAGFL
PLHGGFRDLFVEAPEAKYCCESCRLVLCQPRQTECGHRFCQSCITDILSRPNPVCPADME
PLFNNKIFRDVCCHREIMALKVYCRSQSNGCQEQMSLQQIPDHLNVCPFFEVPCPLGKCK
ERMMRKEIPDHLNRKCKHRETTCDFCMTKMPLTDLQKHKETVCPAFPVSCPNLCSFNSLP
RSELSTHQHDCPKAQVSCQFHRYGCTFKGLNQDMRQHESTFAAEHLRMMANRNASLENKV
EDVKAELLDRYKVLPALSSRLSELENQNDELREKNRQMEQKLATMQKLMSSHSEKLLEVE
LELRSLRQLRDEVENLRGSLENVRTRLATLEQGGRSGTGSTTHTLASMETQLNRHDDMLS
MHEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYK
MCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFK
PDPNSSSFRRPAAEMNIASGCPLFVSQSVLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggggaggagtgctgacgggagggaggtgcagattcccctccagcaggtggcg
ccctccctggccccgcccctcgccgtggctcctcccatcagcccgcctcctcacagacca
gccaatccctggcctcccaacgacctcgccctcccaccaggtgtccctgcaggcttcctt
cctcttcatggaggcttcagagatctgtttgtagaagctcctgaagctaaatactgctgt
gagtcctgcagactggtcctctgccagcccagacagactgagtgtggacacaggttctgc
cagagctgcatcacagacatcctcagtcgtcctaacccggtgtgtcccgctgacatggaa
ccgctgttcaataacaagatcttcagagacgtttgctgtcatcgggaaatcatggcgctg
aaggtttactgtcgcagtcagagcaacggctgtcaggagcagatgagtctccagcagata
cctgatcacctgaacgtgtgtccattcttcgaggttccgtgtccgttggggaaatgtaaa
gaacgaatgatgaggaaggagattcccgaccacctgaaccgcaaatgtaaacacagagag
accacctgcgacttctgcatgaccaaaatgcccctgactgacctgcagaaacataaggag
acggtgtgtccggcgttcccggtgtcgtgtccaaacctctgctccttcaattcgctgccg
cggagcgagctctccactcaccaacacgactgtcccaaagctcaggtgagctgtcagttc
catcgctacggctgcacctttaagggtttgaatcaggacatgaggcaacatgagtccacc
tttgcagctgaacacctgagaatgatggccaatagaaacgcttccttagagaacaaggtg
gaggatgtcaaagctgaactgttggacaggtataaggtgcttcctgctctcagcagtcgt
ctctctgaactcgagaaccagaacgatgagctgagagagaagaaccgccagatggagcag
aaactggccaccatgcagaaactgatgagctctcactcagagaagctcctggaggtggag
ctcgagctgcgttctctccgtcagctcagagacgaggtagagaaccttcgaggatcacta
gagaacgtccggacaaggctggcgactctggaacaaggaggacgcagtggaactggatcc
acgacacacactctggcgtccatggagactcagctgaatcgccatgacgacatgctgagt
atgcacgagattcgattggctgacatggacctgcgtttccaggttctggaaacagcgagc
tacaacgggacactgatctggaagattcgtgactataagagacggaaacaggaagcagtg
gcggcgaagacgctgtcgctgtactcacagccgttttacacgggatacttcggatataag
atgtgtgctcgtgtctacctgaatggagacggcatgggcaagggaacgcacctgtcgctg
ttcttcgtggtgatgaggggcgagtacgacgccctgttgccctggccctttaaacagaag
gtcactctgatgctgatggatcagggtccatccaggaaacacttaggtgatgcctttaaa
ccagatccaaacagcagcagcttcagacgtccggcagcagaaatgaacatcgcctctggt
tgtcctctgtttgtgtctcaaagtgtccttgagaccggcagctacatcaaggacgacacc
attttcatcaaggttaccgtggatacctctgaccttcctgacccttga
DBGET
integrated database retrieval system
