Scomber scombrus (Atlantic mackerel): 133977083
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Entry
133977083 CDS
T10651
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
133977083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133977083
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
133977083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf_C2H2_ZNF292
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
133977083
NCBI-ProteinID:
XP_062271205
LinkDB
All DBs
Position
Unknown
AA seq
1013 aa
AA seq
DB search
HINNDHIHGEKKEFVCRWEDCSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCAKAYSR
LENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHXNRTHSNEKPYVCKIPGCTKRYT
DPSSLRKHVKTVHGPEAHVTKKQRSDVPPRPPAPRENGENETGHRDRIQRDDKISDSSSS
PRGVEDYLHVKSIKTENSVMYQSSPGGQSSCSSEPSPLGSTTNNDSGVEMAAHSGGSLGD
LSTLDELPFVESFGFEDSRGGVAAVGLHYRKQLSTCQHLEHLKKEKLMTVRDSCRWATNP
TPLALGTKLPPIPATGSLLESPNIGGGPVSFPGSGFGDLSSGKMTLLGLSERRDSTSSTL
SSVYTLSRRSSGISPCYSSRRSSQASQFGANRPSNISSADSYDPISADISRRSSQTSQCG
GSSRGSGGYGGGSLTGILSLTPAQHYRLKAKYAAATGGAPPTPLPNIDKMSLKSHQMYGD
FQESPTSTNGLTSRQYSSYATRSLMPHEVPSNIPRRASDPVRRVAPDSHSQPQMQRYSSM
GTLSGGVQPHPPPAADRQHLSHQTFLRSDGSLLRYPCSLRPPSISENVAMETMTNDIAEE
DVMLPGDEVQCLKTENGDATNRVSTHRDFQGNPLQQQAYYQRRMAVVDTNMNPPNKSSLG
PLDVSQHHSKLQVSGNLALLQQNQNFGSFQNNHSSNQQMIQNLANTQQRYKQPNAEPGAN
CLQQQRFQQSSNLNEAISSRYMFKQDIGPYDKNGNTTYPPCNNTAAINGGLLTCKQEPVD
MHFADAGFQPVQVKIEDCEESILISDQQNCKMPSQSPLQAGNQSHLQPRPPAQPKSLNRH
LSRPKIAQQTRHPGHANPDATPNIPNSGVIGFHCGDSSDDNALYYTGQIQVFESNGNLDH
HVVDVPPFENDATTSSSGTSQTARTVDSNAVLEQAQIDFDSMLDDGDHSSLMSGTLSPGL
LTSLSRSSSRLTTPRNSVTLPSVPAGTGNMAIGDMSSLLSALAEESKFLNLMS
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
cacatcaacaacgaccacatccacggagagaagaaggagttcgtgtgccgctgggaggat
tgttccagggagcagaaacccttcaaagctcagtacatgctggtggttcacatgcgccga
cacacgggggagaaaccgcacaagtgcacgtttgagggctgtgcgaaggcgtactcccgt
ctggagaatctcaaaactcatctgcgctcgcacacgggagagaaaccgtacgtctgcgag
cacgaaggctgcaacaaagctttctccaacgcatcggaccgagccaaacacnagaaccgg
actcactccaacgagaaaccgtacgtgtgtaagatccccggctgtacgaagcgctacacg
gaccccagctctctcaggaagcacgtgaagacggtgcacggccccgaggctcacgtcacc
aagaagcagcgcagcgacgtgccgccgaggccgccggcgcccagagagaacggagagaac
gagacgggacacagagacagaatccagagggacgataagatatcagacagcagcagctcc
cccagaggagtggaggactacctgcacgttaaatccatcaagacggaaaactctgtgatg
tatcagtccagccctggcggtcagtcatcatgtagcagcgaaccatcaccgcttggcagt
accaccaacaatgacagtggagtagaaatggcggcgcacagcgggggaagtctgggggac
ctcagcaccttggacgaactgcccttcgttgagtcctttggtttcgaagattcccgcggt
ggggtcgcggcggtgggcctccactaccggaagcagctcagcacctgccagcacctggag
catctgaagaaggagaagctgatgacagtgagggactcgtgtcgatgggccaccaaccca
acaccgctggccctcggcaccaagcttccacccataccagcaactgggtccctcctggaa
agtccaaatataggtggtggtcctgtgtccttccctggttccggctttggtgatctgagc
tccggtaaaatgactctgctgggtctttcggagcgccgcgacagcacctccagcaccctg
agctcagtttacacactcagccgccgttcctcgggcatctccccctgttactcaagccgg
cgctccagtcaggcttcacagttcggcgctaaccgcccaagcaacatcagctccgctgac
tcctacgaccccatctctgccgacatctcgcgacgctccagccagaccagtcagtgtggg
ggaagcagcagaggatcaggggggtacggaggagggagcctaaccggcatccttagcctg
acccctgcccagcactaccgcctcaaagcaaaatacgctgctgccactgggggcgcccca
cctactcctctcccaaacatagacaagatgagtcttaagtctcaccagatgtacggggac
ttccaggaatcccccacgtcaaccaatgggctgacttccaggcagtacagcagctacgcc
acacggagcttgatgccccatgaagtcccgtcaaacatcccccgccgagccagtgaccct
gtgagacgggtggcaccagattctcacagccagccgcagatgcaacgctacagcagcatg
ggaacgctgagcggaggggtgcagccccatccgcctcctgcagcagatcggcagcatcta
tctcaccaaaccttcctgcgatcggatggcagtctcctccgctacccttgcagcctgcga
ccgccaagcatttcggagaacgtcgccatggagacaatgacaaatgacatcgcggaggaa
gacgtgatgctgccgggtgacgaggtgcagtgcctcaaaactgagaacggagacgcaaca
aacagagtgtcgacacatcgagattttcaaggaaaccctctccagcagcaggcgtactat
cagagaaggatggccgtcgtcgataccaacatgaacccgcctaacaaaagctctttggga
cctctggatgtctctcagcaccactccaaactgcaggtcagtggaaacctggcgctcctc
cagcagaaccagaactttggctcttttcagaacaatcacagctctaaccagcagatgatt
caaaaccttgcaaacacacagcagagatacaaacagccgaacgctgaaccaggagcaaac
tgtctccagcagcagagatttcagcagtcgtcaaatctcaatgaagcaattagctctcgg
tacatgttcaaacaagacatcggaccctacgataaaaacggtaacaccacttatccacct
tgtaacaacacagcagcgatcaacgggggcctgctaacctgcaaacaggagccagttgac
atgcactttgctgatgctggatttcagcctgtgcaagtcaaaattgaggactgtgaagaa
tcaatcctgatttcagaccagcagaactgtaaaatgccctcccagagtcctttgcaagct
gggaatcagagccatctccagccaaggcctccagcacaacctaaatctttaaacaggcac
ctttccaggccaaagattgcccagcaaacaaggcacccaggtcatgctaacccagacgct
actcccaacatacccaatagtggagttattggatttcattgtggcgacagctctgacgac
aacgccctgtactacacagggcagattcaagtatttgagtccaatggaaacttggaccat
catgtggtggatgtacctccgtttgaaaatgatgcaacaacttccagttcaggcaccagc
cagacggccaggactgtagactctaacgcagtgctggagcaggcacagatagactttgac
agtatgctggatgacggggatcactccagcctcatgtcagggactctgagtccaggtctg
ctcacgagcttgtcccggagttcctcccgcctgacgacacccaggaactcggtcacattg
ccgtcggtgccggcggggacggggaacatggcgatcggggacatgagctccttgctgtct
gctctggcagaagagagcaagttcctcaacctgatgtcttag
DBGET
integrated database retrieval system
