Scomber scombrus (Atlantic mackerel): 133979571
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Entry
133979571 CDS
T10651
Symbol
polk
Name
(RefSeq) DNA polymerase kappa isoform X1
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
133979571 (polk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssco03400
]
133979571 (polk)
Enzymes [BR:
ssco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
133979571 (polk)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
133979571 (polk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
Sgf11
DUF4363
Motif
Other DBs
NCBI-GeneID:
133979571
NCBI-ProteinID:
XP_062274099
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Position
4:complement(14698850..14705633)
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AA seq
878 aa
AA seq
DB search
MENGVASTKGEGFLSRMALNDNKAGMEGLDRDKINKIIMESSKGSRFYENEVKKEQQVNQ
RIDKMMQQKVQITEQQLKNAQAQVERLAYELEKRRNLSHLIVHVDMDAFYAAVEMRDCPE
LKDKPMAVGSMSMLSTSNYHARKFGVRAAMPGFIAKKLCPDLVIVPTNFDKYRAVSNEIR
EIFAHYDPHFQPMSLDEAYLDFTDHVKLRESCPESSRTHLFRTSTSETGEEQIDLPHESV
PEVRDLSPVLFEDSPSSSPCFLSPEGVGAAGGAFEVFGTSVEEAVREMRFRIEQKTMLTA
SAGIAPNTMLAKVCSDKNKPNGQYRLPSTREAVMDFIQNLPVRKVSGIGKVSEKMLNALD
ISSCSHFSQQMALLSLLFSETSWHHFIQVSLGLGSTYLPRHEERKSMSTERTFRELNKAE
EQLSLCRELCEDLAEDMKKEDLKGKTVTLKLKNVNFEVKTRAVTLPYAVATVDEIYAAAK
DLLKTEMEKESPQPLRLRLMGVRISAFISSDDKKPLQKSIICFLQPGKTDSTSSYQLERE
HLSSCPPLVQKCQRQEEVPWRTKLWGIKEGQTSDEPQMSFFQKAHAKRLQLQAVSASTQE
EVHNEKASVITSTGNHAHESVKSSINGQRSESNCEASGLSENDSVSLSEAHVSTSDRGGR
VSESFTCPVCFRQVETTDLNVFNQHIDQCLSDVSRKPNQITVSDSESDQDGENDHEECEV
IDKWRRESEAQKKQESNKPDSPQDQHNLKNDSGQTVLLINGENGPVTLQQPQACNGKGPV
LICPVCQLTQDTNDLTMFNRHVDLCLNQEVLHELGGQTSSSINLPSVTVTNTKVTDKGHL
LLRQTSKAKNKRRDTPSSPPSKKARGLGPRNTIDKFLR
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggagaatggggttgcctccactaaaggagagggcttcctgtccagaatggccctcaat
gacaacaaggctggtatggaaggtcttgacagggataagatcaacaagatcatcatggag
tcatccaagggatccaggttttatgaaaatgaggtgaagaaagagcagcaggtgaaccag
cgcattgataaaatgatgcaacaaaaggtgcaaattacagaacaacagctaaagaacgca
caggctcaggtggagaggttggcctacgagctggagaaaagacgcaatttaagtcattta
attgtacatgtggacatggacgctttctacgctgctgtggaaatgagagattgtcctgag
ctgaaggacaaacccatggctgttggatctatgagcatgctgtcaacatctaactaccac
gccaggaagttcggagttcgagctgccatgcccggcttcattgcaaagaaactctgcccc
gacctagtcattgttccaacaaactttgacaaatacagagctgtgagtaatgagatccgt
gagatttttgcacactatgaccctcatttccagccaatgagcctagatgaagcttatctg
gattttacagaccacgtgaaactgagggagagctgccctgaatcatcacgaacacacctt
ttccgcaccagcaccagcgaaacaggtgaagagcagattgatcttccccatgagtcagta
ccagaggtgagagacctctctcctgttctgtttgaggacagcccgagctcctctccctgc
tttttgagcccagaaggtgttggtgcagctggcggggctttcgaagtgtttgggacgtct
gttgaggaggctgtgagagagatgcgcttccgaattgagcaaaagaccatgctgactgcc
agtgcaggcattgctccaaacacgatgcttgccaaagtgtgcagtgacaagaacaagccc
aacggccaatacagactcccatccaccagagaggctgtcatggacttcatccagaacctc
ccagttcgcaaagtttctggcatagggaaggtgagtgagaaaatgctgaatgcgttggac
atcagcagctgttctcatttcagccagcagatggcgttgttgtcattgttgttctcggag
acatcctggcatcatttcatacaggtttccctgggtttgggctccacatacctaccgagg
cacgaggaaagaaaaagcatgagcactgagaggacatttagagaattaaataaggctgag
gaacagttgtctttatgtagggagctctgtgaagatttagcagaagacatgaagaaagaa
gatctgaagggtaaaacagtaacactgaagctgaagaacgtgaactttgaagtgaaaacc
agggcagtgacgctgccgtatgctgttgctacagtggatgagatctatgctgctgccaaa
gacctgctgaaaacagaaatggaaaaggaaagccctcagccactcagactgagactcatg
ggtgttcgaatctctgcctttatcagttcggatgataaaaagcctctgcagaagagcatc
atttgtttcctccagccaggcaagacagactctaccagctcttaccagcttgagagggag
catctctcttcttgtcctccgctggtgcagaagtgccagagacaggaggaagttccctgg
cggactaagctatgggggataaaggagggtcagactagtgatgaaccccagatgtctttc
ttccaaaaggcccatgccaaaagactacaactccaggcagtgagtgcaagcacacaagag
gaagtccacaatgaaaaggcttctgtgattacttccacaggcaatcatgctcatgagagc
gtgaagtcatcgataaatggacagaggtcagagagtaactgtgaagcatctggtctctca
gaaaatgacagtgtttccctctcagaggctcatgtttccacatcagaccgtggtggcaga
gtgtcagagagtttcacctgtcctgtgtgtttcaggcaggtggagacgactgatttgaat
gtcttcaaccaacatatagaccagtgtctcagtgatgtttctagaaagccaaatcaaatc
acagtttctgactctgagtcagatcaggatggcgagaatgaccatgaagaatgtgaagtg
attgacaaatggaggagggagtctgaggctcaaaaaaagcaggagtcaaacaaacctgat
tccccgcaagaccaacacaacttgaaaaatgattcaggccaaacagttttgctgatcaat
ggtgaaaatggaccagtgaccttgcagcagcctcaggcatgtaatggtaaaggtcctgtc
ctaatctgcccagtatgtcagctgacgcaggacacaaatgacctcactatgttcaatcgt
catgttgacctctgcctgaaccaggaagtactgcatgagctggggggacagacatcatct
tccattaatctaccttcagttacagtaacaaacaccaaagtgacagacaaaggccacctc
ctgttaaggcaaacaagtaaagcaaaaaacaaaagacgggacactccttcctctccacca
tctaaaaaggcgagaggcctcggtcctcgcaacaccattgacaagttccttaggtga
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