Scomber scombrus (Atlantic mackerel): 133980422
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Entry
133980422 CDS
T10651
Symbol
bmp16
Name
(RefSeq) bone morphogenetic protein 16
KO
K21283
bone morphogenetic protein 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04060
Cytokine-cytokine receptor interaction
ssco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133980422 (bmp16)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
133980422 (bmp16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ssco04052
]
133980422 (bmp16)
00536 Glycosaminoglycan binding proteins [BR:
ssco00536
]
133980422 (bmp16)
Cytokines and neuropeptides [BR:
ssco04052
]
Cytokines
Transforming growth factors (RSTK binding)
133980422 (bmp16)
Glycosaminoglycan binding proteins [BR:
ssco00536
]
Heparan sulfate / Heparin
Morphogens
133980422 (bmp16)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
133980422
NCBI-ProteinID:
XP_062275119
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Position
5:14807327..14816794
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AA seq
480 aa
AA seq
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MFPANLLLLMVLLLPQASSGRQGGDTSEIDHDRVPPTPSTLLPRPAGSPLEPSLAQTIQS
LLLSRLGLQSQPDPRHGVPVPRYLLDLYRFHQQQFHLLEDPSFSFPSHHIQEANTVRSFH
HTDPLGNSPSADDRKRVNISFNISSIPQDEKVLSAELRLLRSDRASLGPGPHRLNLYLSE
HHEDPEHALLETRLLNTGLHSHKESGFWEAFTLSAELLHKALAGSGSLGFLLEVRPENST
ASLHDQSFLPAADKEVEEKHKEAHLRVCRSVGQDEHSWAQERPLLVTYSHDGRGEPLVKH
VRRNQSGGQRMRGRKGTKDRTRSSSKGRNRDQAWGRAKKTGYAVPGWGGDKRGVGWSESG
RVKRNGGRAAKLKRLSRNRCRRHPLYVDFNDVGWHKWIIAPSGYDAYFCLGECRFPLADH
MNSSSHAMVQTLVNSVNGAVPRACCVPTSLSPIALLYLDPQDRVVLKNYQDMAVEGCGCR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgttccctgctaacctactgctcctcatggtcctgctgctacctcaagcctcgtctggt
cgccagggtggagacaccagcgagatcgaccatgacagggtaccccccacaccttccact
ttgttgccccgaccagccggttcccctctggagcccagcctggctcagaccatccagagt
ctcctcctaagccggctgggcctgcagtcgcagcccgaccctcggcacggagtgccagtg
ccccgctaccttctggatctttaccgcttccaccagcagcagttccatctactggaggac
ccttcctttagcttccccagccaccacatccaggaggccaacacagtacgcagctttcac
catactgacccccttggaaacagtccttcagcagacgatcgtaagagagtgaacatctcc
ttcaatatctcctccatcccacaggatgagaaggtgctctctgctgagcttcggctcctc
cgcagtgacagagcctcgctgggccctgggccccatagactaaacctgtacctctctgag
caccatgaggaccctgaacatgctctgcttgagacaaggttactcaacacaggcctccac
agtcataaagaaagtggcttttgggaagcgtttaccctaagtgcagagctccttcataaa
gcccttgctgggagtggcagcctgggcttcctcttggaggtcagaccagagaacagcacc
gcctctctccatgaccagagtttcctccctgctgcagacaaggaggtggaggagaaacac
aaagaggcacacctgagggtgtgcaggtctgtggggcaggatgagcacagctgggcccag
gagagacctctcttggtgacttatagtcatgacgggcgtggagagcctttagtcaaacat
gtcaggaggaaccagagtggtggccagaggatgagagggagaaaagggaccaaagatagg
accaggagcagcagtaagggccgcaatagagaccaagcctgggggagggccaagaagacg
gggtatgcagtgccaggctggggaggcgataaaagaggggtcggttggagtgaaagtgga
agggttaaaagaaatggaggtcgtgctgcaaaactgaaacgcctttcccgtaacagatgc
cgccgtcatcctctatacgtagatttcaatgatgtgggctggcacaagtggatcattgca
cccagtggctacgatgcctacttctgcctgggagagtgtcgctttcctctggccgaccac
atgaactcctccagccatgccatggtgcaaactctggttaactctgtgaatggagcagtg
ccgcgggcctgctgtgtccccacatccctcagccccatcgccctgctctacctggaccct
caagaccgagtggtactgaagaattaccaggacatggcggttgagggctgtggttgccgg
tag
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