Scomber scombrus (Atlantic mackerel): 133980605
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Entry
133980605 CDS
T10651
Symbol
fkrp
Name
(RefSeq) fukutin-related protein
KO
K19873
fukutin-related protein [EC:2.7.8.-]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00515
Mannose type O-glycan biosynthesis
ssco01100
Metabolic pathways
Module
ssco_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
133980605 (fkrp)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssco01003
]
133980605 (fkrp)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133980605 (fkrp)
Glycosyltransferases [BR:
ssco01003
]
Glycan extension
O-Glycan
133980605 (fkrp)
Membrane trafficking [BR:
ssco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
133980605 (fkrp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FKRP_N
LicD
TauE
Motif
Other DBs
NCBI-GeneID:
133980605
NCBI-ProteinID:
XP_062275347
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All DBs
Position
5:14379675..14382175
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AA seq
532 aa
AA seq
DB search
MRISFCQGLLTGAIILNLLILYYVSRAQQQMMDKRKELGRGTRRASLPASGFGGGLGGLI
GPGGEPGVAGVEGHSRGPRVTVLLREFENFENYVGDVANSFLRQRPELPFLAVADMSPYP
PLVLPDGARLLMLSPSPDQPPQAHRPEFHVQTEFVLLVPDGVELEQPRAIERLIRELEGE
GGGPVRLVAAPVLARSAVQCLHLRVNLREWTATYSPAASGSSGSVCTALQGDAVVLIRTE
DLFNLSVPLGRPLFSSLFVQTALRGWKVKLLESPCFSANHRPLFSSAHNQWKADTRLKEA
TGKLMRSFGLKRLLFPEGKEQWYGCSKETHRCFGTVQDDTPDYLYLDRWTPPCCLRALRE
TTKYVINILESSGVRYWLEGGTLLGAVRHQDIIPWDYDVDLGIYLEDVSNCDHLKNLDSG
SLVDANGYVWERAVEGDFYRVQYSEANHLHVDLWPFYPRNGIMTKDTWTEHKQDVEFPEH
FLQPLVPMPFAGINAYGPNNPRAFLELKFGEGVIENPQYPNPTKKRLDRSKL
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcagtttttgccagggtttgttaaccggagccatcatcctcaacctcctcatt
ctctactatgtgtcccgggcccagcagcagatgatggacaagaggaaggagcttggcagg
ggcaccaggagggcttccctaccggcctccggttttgggggaggcctagggggactcata
gggcctggaggtgagcctggagtggccggggtggagggacacagtcgtggcccgcgtgta
acggtgcttctcagggagtttgagaactttgagaattatgttggagatgtggccaattcc
ttcctcagacagagacctgagcttcctttcctggctgtggctgacatgtctccttacccg
cccctggtgctcccagatggggcccggcttttgatgctctcccccagcccggaccagccg
ccacaagctcacaggccggagtttcatgtccagacagaatttgtgctgctggtgcctgat
ggagtggaactggagcaaccgcgggctattgagaggctgatcagggagctggaaggtgag
ggtggggggcctgtgaggctggttgctgcacctgtgctagctcggtctgctgtgcagtgt
ctgcacctgcgagtgaacctcagagagtggacagctacctactccccagctgcgtctggt
agcagcgggagcgtgtgcacggctttacaaggagatgcagtggttctgattcgcacagag
gatctttttaacctctctgtacctctgggccgaccccttttctcctcactattcgtccaa
actgccctgagaggctggaaggtcaagctactggagagcccctgtttctccgcaaaccac
cggcccctcttcagctcagctcacaaccagtggaaagctgacactcgactgaaggaggcc
actgggaagctcatgaggagctttggcctgaagcgtcttttgtttcctgaagggaaggag
cagtggtatggctgcagtaaggagacacatcgctgcttcggcactgtgcaggatgacact
ccagactacctctatctggatcgctggacaccaccctgttgtcttcgagcactcagagaa
actaccaagtatgtcatcaatatcctggaaagctctggtgtgcgctactggctagagggg
ggaactctgctgggtgctgtccgccatcaggacatcattccctgggactatgatgtggac
ctgggtatctacctggaggatgtatccaactgtgatcacctgaagaacctggactcaggc
tctctggtggatgctaacggctatgtctgggagcgtgcggtagaaggtgacttctacaga
gtccagtacagcgaggccaaccaccttcacgttgacctgtggccgttctacccacgtaac
ggcatcatgaccaaggacacgtggacagagcacaaacaagatgttgaattccctgaacac
ttcctgcagccgcttgtgcccatgccctttgctggcatcaacgcctacggccccaataat
ccccgcgccttcttggagctcaagtttggagagggggtcattgagaatccccaatacccc
aaccccaccaagaaaagactggaccgaagcaaattatga
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