Entry |
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Symbol |
trpc6b
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Name |
(RefSeq) short transient receptor potential channel 6
|
KO |
K04969 | transient receptor potential cation channel subfamily C member 6 |
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Organism |
ssco Scomber scombrus (Atlantic mackerel)
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Brite |
KEGG Orthology (KO) [BR:ssco00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:ssco04040]
133981006 (trpc6b)
Ion channels [BR:ssco04040]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
133981006 (trpc6b)
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
5:21937558..21946703
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AA seq |
880 aa
MSGRGRVLEHVHAAFSPQKLLENLPLGAQRLHRRHQDRRWDAGWSNEGRAMMLQRVVAKP
RRQALRGPGYLFQAQSCSSLSMTEEHFLDAAEYGNVPEVRRMLQELPDLNINCVNYMDQN
ALQLAVSNEHLKVTKLLLRMKDIARIGDALLLAISKGYVRIVEAILSHQAFADGQRLINS
PSQVDTHDDFFAYDEDGTLFSHDITPIILASQCHEYEIVHILLTKGAHIERPHDYFCPCR
NCSEQQRHDSFSHSQSRINAYKGLASPAYLSLSNEDPVMAALELSNELAVLANIEKEFKN
DYKNMSMQCKDFVVGLLDLCQNTEEVEAILNGDTESCKSSETFGRQNLIRLKLAIKYEVK
KFVAHPNCQQQLLSIWYENLSGLRQQTTTVKILLVLGVAVGLPILAFMYWIAPSSKLGKL
MRGPFLKFVAHAASFMIFLCLLVLNAADRFEGPSVLPNMTTHDHPSQLFRMTTTPFTWME
ILIISWVIGKIWEECRDIWSQDIREYISEPWNLLDFSILAIFMTSFMARLMAFWHAYSAQ
CYVDKHYTDLSNLTLPFEIQYFQLARIDWIPSDPQLISEGLYAVAVVLSFSRIAYILPAN
ESFGPLQISLGRTVKDIFKFMVIFITVFVAFMVGMFNLYSYYLGAKHNDAFTTIEESFKT
LFWAIFGLSEVKSVVLNIDHKFIENIGYVLYGVYNIIMVIVLLNMLIAMFNSSFQEIEDD
SDVEWKFARAKLWFSYFEYGGTLPVPFNLVPSPKSVVSLLRGIREFLWDLPRGKIKENSK
DEVELNNLRQQEDLTVEASLCPTRHKKIMNRLIKRYILKAQRDKDNDEVNEGELKEIKQD
ISSLRYELLEMGNHEMETLAELIRQLDEVMHVQEKQSLEE |
NT seq |
2643 nt +upstreamnt +downstreamnt
atgtccggcagagggcgcgtccttgaacacgtccacgctgccttcagcccacagaagctg
ctagaaaacctccccctgggcgcgcagaggctgcaccgtcggcatcaggaccggaggtgg
gacgcaggatggagcaatgaagggagagccatgatgctgcagcgggttgtggccaaaccc
cggagacaagctttaaggggacctggttacctatttcaagctcaatcctgctctagtctt
tccatgacagaggaacattttttagatgccgcagaatatggcaatgtccctgaagtgagg
cggatgctacaggagctgccagacctcaatatcaactgtgtgaattatatggaccagaat
gcattgcagctagcagtttccaatgaacatttgaaggtcactaagctcctacttagaatg
aaagacatcgctagaataggagatgctttgctgttagccattagtaaaggttatgtccgt
atagtcgaggccatactgagccatcaggcctttgcagacggtcagaggttgataaacagt
cccagccaagttgacacacatgatgatttctttgcttatgatgaggatggcacacttttc
tctcacgacatcactcccattattctggcctcccagtgccatgaatatgaaatagtgcat
atacttcttacgaaaggggcccatatagagcgtcctcatgattacttctgcccgtgcagg
aactgcagtgagcagcagaggcatgactcttttagccattcacagtctcgcatcaatgca
tataaaggtctggccagtccagcatatctgtccctctccaatgaagaccctgtgatggca
gctctggagctgagcaatgagcttgcagttttggccaacattgagaaggagttcaagaat
gattacaagaatatgtccatgcagtgtaaagactttgtggttgggctcctggatttgtgc
caaaacacagaggaagtggaagccatcttaaacggggacaccgaatcatgtaaaagctct
gaaacctttgggagacaaaaccttatcaggttgaaacttgccataaaatatgaagttaaa
aagtttgtggcacatccaaactgtcagcagcaactcctctccatctggtacgagaacttg
tctggactgcgtcagcaaaccacaactgttaaaatccttcttgttcttggtgtagctgtt
ggtttgcctattctagcctttatgtactggatagcaccatcaagtaagttagggaaactc
atgcgtggacctttcctgaagttcgtggcccatgcagcttccttcatgatatttctttgc
ctattggtcctgaacgcagctgaccggtttgaggggccgtcagtgctgccaaacatgacc
acccatgatcacccttcgcaactgttccgtatgacgactacccccttcacctggatggag
attcttatcatatcctgggtcatagggaaaatttgggaagaatgtagagacatttggtcg
caggacatccgggaatacatctcagaaccgtggaaccttcttgactttagtattttagcc
atttttatgacctccttcatggccagattaatggctttctggcatgcatactctgcccag
tgttatgttgacaagcactacactgacctgtccaacttgactttgccctttgagatacag
tatttccagctggctcgaatagactggattccctcagatccgcaacttatatctgaaggc
ctctatgcagttgcagttgtgctgagtttctctcgtattgcatacatcctgcctgccaat
gagagctttggccctttgcagatttccctgggaaggacagtgaaggatatctttaagttc
atggtgattttcataacagtttttgtggcattcatggtgggaatgttcaatctgtattca
tactacctcggggccaagcacaacgatgcctttacaacgattgaagaaagttttaagaca
ttattttgggccatctttggcttgtcggaagtgaaatcagtggtccttaatatcgaccat
aagttcattgagaatattggctatgttttgtacggggtgtacaacatcatcatggtgatt
gtcttgctgaatatgctcattgccatgtttaacagctcctttcaagaaattgaggatgat
tccgatgtggagtggaagtttgccagagcaaaactctggttctcatattttgagtatggt
ggcacgctgcctgtgcccttcaaccttgtacccagcccgaagtctgtcgtttccctcttg
cgcggaataagggaatttctttgggatttacctcggggcaaaatcaaagaaaattcaaag
gatgaggtggaacttaacaatttgaggcaacaggaagatttgactgtggaagcatcgctt
tgtcccacccgtcacaaaaagataatgaatcgtctcatcaaaagatacatcttaaaagcg
cagagagataaagacaatgatgaagtgaatgaaggtgaactgaaagagatcaaacaggac
atctccagtctccgctatgagctgctggaaatggggaaccacgagatggagaccctggca
gagctcatcaggcagctggatgaagtcatgcatgttcaggagaaacaaagcttagaagag
tga |