KEGG   Scomber scombrus (Atlantic mackerel): 133981006
Entry
133981006         CDS       T10651                                 
Symbol
trpc6b
Name
(RefSeq) short transient receptor potential channel 6
  KO
K04969  transient receptor potential cation channel subfamily C member 6
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ssco04040]
    133981006 (trpc6b)
Ion channels [BR:ssco04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   133981006 (trpc6b)
SSDB
Motif
Pfam: TRP_2 Ion_trans PKD_channel Ank_2 Ank Ank_4
Other DBs
NCBI-GeneID: 133981006
NCBI-ProteinID: XP_062275875
LinkDB
Position
5:21937558..21946703
AA seq 880 aa
MSGRGRVLEHVHAAFSPQKLLENLPLGAQRLHRRHQDRRWDAGWSNEGRAMMLQRVVAKP
RRQALRGPGYLFQAQSCSSLSMTEEHFLDAAEYGNVPEVRRMLQELPDLNINCVNYMDQN
ALQLAVSNEHLKVTKLLLRMKDIARIGDALLLAISKGYVRIVEAILSHQAFADGQRLINS
PSQVDTHDDFFAYDEDGTLFSHDITPIILASQCHEYEIVHILLTKGAHIERPHDYFCPCR
NCSEQQRHDSFSHSQSRINAYKGLASPAYLSLSNEDPVMAALELSNELAVLANIEKEFKN
DYKNMSMQCKDFVVGLLDLCQNTEEVEAILNGDTESCKSSETFGRQNLIRLKLAIKYEVK
KFVAHPNCQQQLLSIWYENLSGLRQQTTTVKILLVLGVAVGLPILAFMYWIAPSSKLGKL
MRGPFLKFVAHAASFMIFLCLLVLNAADRFEGPSVLPNMTTHDHPSQLFRMTTTPFTWME
ILIISWVIGKIWEECRDIWSQDIREYISEPWNLLDFSILAIFMTSFMARLMAFWHAYSAQ
CYVDKHYTDLSNLTLPFEIQYFQLARIDWIPSDPQLISEGLYAVAVVLSFSRIAYILPAN
ESFGPLQISLGRTVKDIFKFMVIFITVFVAFMVGMFNLYSYYLGAKHNDAFTTIEESFKT
LFWAIFGLSEVKSVVLNIDHKFIENIGYVLYGVYNIIMVIVLLNMLIAMFNSSFQEIEDD
SDVEWKFARAKLWFSYFEYGGTLPVPFNLVPSPKSVVSLLRGIREFLWDLPRGKIKENSK
DEVELNNLRQQEDLTVEASLCPTRHKKIMNRLIKRYILKAQRDKDNDEVNEGELKEIKQD
ISSLRYELLEMGNHEMETLAELIRQLDEVMHVQEKQSLEE
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgtccggcagagggcgcgtccttgaacacgtccacgctgccttcagcccacagaagctg
ctagaaaacctccccctgggcgcgcagaggctgcaccgtcggcatcaggaccggaggtgg
gacgcaggatggagcaatgaagggagagccatgatgctgcagcgggttgtggccaaaccc
cggagacaagctttaaggggacctggttacctatttcaagctcaatcctgctctagtctt
tccatgacagaggaacattttttagatgccgcagaatatggcaatgtccctgaagtgagg
cggatgctacaggagctgccagacctcaatatcaactgtgtgaattatatggaccagaat
gcattgcagctagcagtttccaatgaacatttgaaggtcactaagctcctacttagaatg
aaagacatcgctagaataggagatgctttgctgttagccattagtaaaggttatgtccgt
atagtcgaggccatactgagccatcaggcctttgcagacggtcagaggttgataaacagt
cccagccaagttgacacacatgatgatttctttgcttatgatgaggatggcacacttttc
tctcacgacatcactcccattattctggcctcccagtgccatgaatatgaaatagtgcat
atacttcttacgaaaggggcccatatagagcgtcctcatgattacttctgcccgtgcagg
aactgcagtgagcagcagaggcatgactcttttagccattcacagtctcgcatcaatgca
tataaaggtctggccagtccagcatatctgtccctctccaatgaagaccctgtgatggca
gctctggagctgagcaatgagcttgcagttttggccaacattgagaaggagttcaagaat
gattacaagaatatgtccatgcagtgtaaagactttgtggttgggctcctggatttgtgc
caaaacacagaggaagtggaagccatcttaaacggggacaccgaatcatgtaaaagctct
gaaacctttgggagacaaaaccttatcaggttgaaacttgccataaaatatgaagttaaa
aagtttgtggcacatccaaactgtcagcagcaactcctctccatctggtacgagaacttg
tctggactgcgtcagcaaaccacaactgttaaaatccttcttgttcttggtgtagctgtt
ggtttgcctattctagcctttatgtactggatagcaccatcaagtaagttagggaaactc
atgcgtggacctttcctgaagttcgtggcccatgcagcttccttcatgatatttctttgc
ctattggtcctgaacgcagctgaccggtttgaggggccgtcagtgctgccaaacatgacc
acccatgatcacccttcgcaactgttccgtatgacgactacccccttcacctggatggag
attcttatcatatcctgggtcatagggaaaatttgggaagaatgtagagacatttggtcg
caggacatccgggaatacatctcagaaccgtggaaccttcttgactttagtattttagcc
atttttatgacctccttcatggccagattaatggctttctggcatgcatactctgcccag
tgttatgttgacaagcactacactgacctgtccaacttgactttgccctttgagatacag
tatttccagctggctcgaatagactggattccctcagatccgcaacttatatctgaaggc
ctctatgcagttgcagttgtgctgagtttctctcgtattgcatacatcctgcctgccaat
gagagctttggccctttgcagatttccctgggaaggacagtgaaggatatctttaagttc
atggtgattttcataacagtttttgtggcattcatggtgggaatgttcaatctgtattca
tactacctcggggccaagcacaacgatgcctttacaacgattgaagaaagttttaagaca
ttattttgggccatctttggcttgtcggaagtgaaatcagtggtccttaatatcgaccat
aagttcattgagaatattggctatgttttgtacggggtgtacaacatcatcatggtgatt
gtcttgctgaatatgctcattgccatgtttaacagctcctttcaagaaattgaggatgat
tccgatgtggagtggaagtttgccagagcaaaactctggttctcatattttgagtatggt
ggcacgctgcctgtgcccttcaaccttgtacccagcccgaagtctgtcgtttccctcttg
cgcggaataagggaatttctttgggatttacctcggggcaaaatcaaagaaaattcaaag
gatgaggtggaacttaacaatttgaggcaacaggaagatttgactgtggaagcatcgctt
tgtcccacccgtcacaaaaagataatgaatcgtctcatcaaaagatacatcttaaaagcg
cagagagataaagacaatgatgaagtgaatgaaggtgaactgaaagagatcaaacaggac
atctccagtctccgctatgagctgctggaaatggggaaccacgagatggagaccctggca
gagctcatcaggcagctggatgaagtcatgcatgttcaggagaaacaaagcttagaagag
tga

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