Scomber scombrus (Atlantic mackerel): 133981503
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Entry
133981503 CDS
T10651
Symbol
bcar1
Name
(RefSeq) breast cancer anti-estrogen resistance protein 1
KO
K05726
breast cancer anti-estrogen resistance 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04148
Efferocytosis
ssco04510
Focal adhesion
ssco04517
IgSF CAM signaling
ssco04810
Regulation of actin cytoskeleton
ssco05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133981503 (bcar1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133981503 (bcar1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
133981503 (bcar1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
133981503 (bcar1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133981503 (bcar1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAS_C
Serine_rich
SH3_1
SH3_9
SH3_2
DUF7783
DAPDH_C
Rota_NS26
VBS_C3G9
PhoU_div
Motif
Other DBs
NCBI-GeneID:
133981503
NCBI-ProteinID:
XP_062276220
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All DBs
Position
6:complement(32041499..32092105)
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AA seq
966 aa
AA seq
DB search
MNYLNVLAKALYDNVAESPDELSFRKGDIMTVLERDTQGLDGWWLCSLHGRQGIVPGNRL
KILVGMYDSKQLGTPSTPDPCPASLSPRPFLPQSAYAKPPPPTFAIATSSPGFASKPLPA
AQYTSMHPAYSTSSPAQPNPDSVYMMPPSHGPKPSPQSLYQVPSGPSGPPPKAHLGPPSK
APALAQRQYQKSAQDIYQVPPSLGPGPGQGLGQGAAPAVGSGAGQDVYQVPPSLEKRNWE
SSNKPLGKVVVPTRVGQVYVYDTVKQDQDEYDVPPRHQPPTQQDIYDVPPTRQQYNTQVY
DTPPMVVKGPSSGQDIYDTPPRPDKTTQQMVYDFPPSVSKDVPDGQPIREETYDVPPHFA
KLKPQVPVPPGQYLHNNLNDEDDDEPPIPEDVYDVPPPILTDKRFRCDRAGVSQAAQEIY
DIPASLRTGGHTAQDVYDFPREREERGGDRGDHYIYDVPPQVVRDAQSTSEELTMSFKRL
SASSTGSTRSNHSASSLDMVPVRDTSSSSSHPTTGSISGKPLILDLEQAMERLSRLQQAV
ESSVSLMMSFITGNWRSPAHLEGNLSAIHQAADRVRASVRDFLEFARGAVANAAQATDRS
LQTKLGRQVGKMEEVFQSLIRHSQSLDAISWSHTELTAPPPGGDDLDRLIMTARGIPDDA
KQLASFLHGNASLLFKRNNRQQQQLPLPPIPGEISGHMTGSGSGSYQGGDRVNIQSRPLP
SPPKFSAAEEEEGVDRPYETTEEGWMEDYDYVHLQGKEEFEKNQKQLLEKGNIIRHNKTQ
LEQQQIKQFERLEQEVSRPINNDMTGWVPPQHHPQVNQLAQNGSGGPSSSKLCNGDRQLL
LFYQEQCEQNVTTVTNAIDAFFTSVNSNQPPKIFVAHSKFVILSAHKLVFIGDTLSRQAK
SPDVRARVAQSSNTLCEKLKDIVISTKTAALQYPSPGAAREMTERVRELAGCTQQFRMVL
GQLLVM
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgaactatctgaacgtgctggctaaggcgttgtatgacaacgtagcggaatccccggac
gagttgtccttccgcaagggcgacatcatgacggtgttggagcgcgacacgcaaggattg
gacggctggtggctctgctcgctccacggtcgccaaggcatcgtccccggcaaccgcctc
aagatcctggtcggcatgtacgatagcaagcagctgggcacgccctccacgccggatcct
tgtcccgcctccctgtcgccgagacccttcctccctcagagcgcctacgccaaaccgccc
cctccaacttttgctattgccacgtcctcccccgggttcgccagcaagccccttcccgca
gctcagtacacgtccatgcacccggcttactccacctccagccccgcacagcccaatcct
gactctgtctacatgatgcccccctcccatggccccaaaccaagcccccaaagtctgtac
caggtcccctctggcccaagtggaccccctccaaaggcccatctaggaccccccagtaag
gccccagctctagcccagagacagtaccagaagtctgcgcaggatatctaccaggtgccc
ccctctttaggcccaggaccaggtcaggggcttggccagggagcagccccagctgtaggc
tcaggagccgggcaggatgtgtaccaggtgcccccctccctggagaagaggaactgggag
agcagcaacaagccactgggcaaggtggtagttcctactcgggttggacaggtgtacgtg
tacgacacagtcaaacaagaccaggacgagtacgacgtcccgcccagacatcagcctccc
acccagcaggacatatacgacgtgccgcccacccgccagcagtacaacacacaggtgtat
gacactcctcccatggtggtgaaggggccctctagtggtcaagatatatatgacacccca
ccaagaccagacaagaccacacagcaaatggtatatgacttccccccgtctgttagtaaa
gacgtccctgatggtcagccaatcagagaggagacctacgatgtacccccccactttgct
aaactcaagccccaggtccccgtccctcctggccagtacctgcacaacaacctcaatgac
gaagacgacgacgagccaccgatccccgaggacgtgtacgacgtcccgccccccatcctg
acagacaaacgcttccgatgcgacagggccggagtcagccaggccgcccaggagatctac
gacatccctgccagcctgcggactggaggacacaccgcccaggatgtctacgacttcccc
cgggaaagagaggagagaggaggagacaggggagaccactacatctacgatgtcccacca
caggttgtccgtgatgcccagtccaccagtgaggagctgaccatgtccttcaagcggctg
tctgcctcgagcacagggagcacacggagcaaccactctgcttcctctttagacatggtt
cctgtccgcgacacctcgtcttcctcctcacatcccaccactggctctatttctgggaaa
cctctcatcttggacctggagcaggccatggagcgcctgtctcgccttcagcaagctgtt
gagtccagcgtctccctcatgatgtccttcattacaggcaactggcggagtcctgcccac
ctggagggaaatctctcagccattcaccaggctgctgatcgtgtgcgcgcctcagtccga
gacttcctagaattcgcccggggcgctgtggcaaatgccgcccaggccacagaccgctct
ctgcagaccaaactgggccgtcaagttgggaagatggaggaggtcttccagagcttgatt
cgacacagtcagagcttagacgccatatcctggtcgcacacagagctcacagcaccgcca
ccaggtggggatgacttagatcgactaatcatgacggcgcgcggcatcccagacgacgcc
aaacagctcgcctcctttctccacggtaacgcctcgctgctgtttaaacggaacaaccgg
caacagcagcagctgccccttcctccaatcccaggggagatcagtggtcacatgacagga
tcaggaagcgggagctatcagggaggggacagggtgaacattcagtcgcggcctctcccg
tctccgccaaagttttcagctgcagaggaagaggaaggtgtggacaggccgtatgagacc
acagaggaaggctggatggaggactacgactatgtacatctacaggggaaggaagagttt
gagaagaaccaaaaacagctgctggagaaaggaaacattatcagacacaacaagacacaa
ctggaacagcaacagataaaacagtttgagcggctagagcaggaagtcagccgacccatc
aacaacgacatgacgggctgggtcccgcctcagcaccaccctcaggtcaaccagcttgcc
cagaacggctcgggaggcccctcctcttccaaactgtgcaacggcgaccgccagctcctc
ctcttctaccaggagcagtgcgagcagaacgtcaccacggtgaccaatgccatcgatgct
ttcttcacctccgtcaactccaaccagccacccaagatctttgtggcgcacagcaagttc
gtcatcctcagcgcacacaagctggtgttcatcggcgacacgctgtcccgccaggccaag
tcgcccgatgtgagggcccgggtggcccagagcagcaacaccctttgtgaaaaactcaaa
gacattgtgatcagcacgaagactgcagcgctgcagtatccttcgcccggagccgccagg
gagatgactgagagggtgagggagctggcagggtgtacgcagcagttcaggatggtgctg
ggacagctgctggtgatgtag
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