Scomber scombrus (Atlantic mackerel): 133982051
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Entry
133982051 CDS
T10651
Symbol
b4galnt4a
Name
(RefSeq) N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1
KO
K09657
beta-1,4-N-acetylgalactosaminyltransferase 4 [EC:
2.4.1.244
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00513
Various types of N-glycan biosynthesis
ssco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
133982051 (b4galnt4a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssco01003
]
133982051 (b4galnt4a)
Enzymes [BR:
ssco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.244 N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase
133982051 (b4galnt4a)
Glycosyltransferases [BR:
ssco01003
]
Glycan extension
Wide specificity
133982051 (b4galnt4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
PA14
OAR
Motif
Other DBs
NCBI-GeneID:
133982051
NCBI-ProteinID:
XP_062276937
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Position
6:12141788..12274501
Genome browser
AA seq
1275 aa
AA seq
DB search
MLRFPVKKIRKQFKLLLLLVLLTSAVWFTYLHINQGKTIKLHFNYGKDGERQMEGTDASR
KRDTRSSAGHHKSEDTSDSREEDAADDEPITGGADGRDHTRIRKVLAQRHKKLPWKPEYK
SQANLHVFEDWCGSSIAQLRKNLHFPLYPHTRTTVKKLAVAPKWKNYGLRIFGFLHPYRD
GDFQFSVSSDDNSEFWLSPDESPLNARLLVYVGQLGTEWTAPGEFSKFRSQSSKSVHLIS
SRRYYFEILHKQDDKGSDHVEVGWRPFLPGLKYEVIDSAYISLYTDESNLKMNSVDHIPQ
TLASHIRLPEESQPHGLEGGSIMRHGADMLKPDPRDTFYSIPMIDPSRLENVLPACLYSP
TYVVKDFPIARYQGLQFVYLSFVYPNDFTRLTHMERENKCFYRESPIYLEKFGFYKYMKM
DEEEDDRPFFFPNPDDFLEEEEVVDAEDEAEIVGTQAPKKPSHASQTSHTSNPSHQHSRP
GTTPAGREVEEEAEDPDEEDEGAINSIIHHRERRHFPHRDVQMGRDVDRDWEKDHTREKM
RYDTRERPPEPQSTHSVVRARSLSWIRTAPAELGPGRKGGGTGRGGGGEKGADTPPKLSK
SSLLFPQKSSLSALASRAKQILSNSAHSNNFHDNNNNKLTGNKKEKREENKIYITRPRPA
RDREREREQRRERREERASRHPREVFPGVFLYQTGKTTRLVNLGSKGHAAGITGGRSLVS
APHLWPNPPTKEEKTLSHNGSINMQKESVQKSANRAAVAKQPDKSKMRGQHQALKTTVTA
DLLSKGDPQTSLSHHKDPPPPTLPRLNSTENTLQGQSRVTSYLRTSEITESQQQPDPDPN
PAELDQDTNHSNPDPDPDPEPEPEEGEMSDYSYEEVEARPGWAEESINWQRTFSVNPMDF
ELLRSDWNDLRCNVSGNLQLAESEVVDVLAQYMEKLNERNGGIYTLLRIINVEKRRDSAR
GNRYLVELELMERGRSVVRLSEYIYLLLHRGRQGDESLENTDSAPASAPASATSAATSSL
TTPPPPPSTRSSARPGATPSSTVYAKPLLCQPVMLQWRKDVMVHFVVPVKNQARWVQQFI
SDMENLHRQTKDDNFSIIIVDFESEDMDVEQALRESSVPRYEYLRREGNFERSAGLQIGV
DTIEDSHSIVFLCDLHIHFPLNILESIRKHCVEGRLAFAPIVMRLSCGSSPQEPDGYWEV
NGFGLFGIFKSDFDKIGGMNTEEFKDRWGGEDWELLDRVLQNGLEVERLRLRNFFHYYHS
KRGMWNAQNKKTPKG
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcttccccgtgaagaagatccggaagcagttcaagctcctgctgctgctggta
ctgctcacctccgccgtgtggttcacctacttacacataaaccagggcaagaccatcaaa
ctccacttcaactacggaaaagatggagagaggcagatggaggggacggacgccagccgc
aagagggacactcgttcctcagccggccaccacaagagtgaggacaccagcgacagcagg
gaggaagatgcagcagatgacgagccaatcacaggaggggccgatggcagagaccatacc
cgcatccggaaagtcctcgcccagcgccacaagaaattaccatggaaaccagagtataag
agccaggccaacctacatgtgtttgaggactggtgtggttcctctatagcccaactcaga
aagaacctgcacttccctctctaccctcatacaagaaccacagtgaagaagctggcagtg
gctccaaagtggaagaactatggcctgagaatatttggcttccttcacccttacagagat
ggggatttccagttctcggtatcgtctgatgataactcagagttctggctgagtcctgat
gagagccctctaaacgccaggctgctggtctatgtaggacagctgggtacagagtggaca
gctccaggcgagttcagcaagttcaggtcccagtcctccaagtctgtgcacctgatctca
tccagacgatactacttcgagatcctccacaagcaagacgataagggctcagatcacgtg
gaagttgggtggcgtccattcctccccggactgaaatatgaagtgatagactcagcctac
atctctctatacacagacgagtccaatctcaagatgaacagtgtggaccacatcccccag
accttggccagtcacatccgtctcccagaggagtctcagccccatggtctggaaggaggc
agcatcatgcggcacggagcggatatgctgaagccagacccaagggacaccttctacagc
attccaatgattgacccttcccgcctggaaaatgttctgccggcctgcctctactctcca
acctacgtagtcaaagattttcccatcgccagataccaaggcctgcagtttgtgtatcta
tcttttgtctaccccaacgacttcacacgactcacccacatggagcgagagaacaagtgc
ttctacagagagtcacctatctacttagagaagtttggtttctacaaatatatgaagatg
gatgaggaggaagatgacagaccgtttttcttccccaacccagatgattttttagaggaa
gaggaggttgtcgatgctgaggacgaggcagagattgttggcacgcaggcgcccaaaaag
ccttctcatgccagccagaccagccacacctccaacccctcccatcagcactcaagacct
ggaactacaccagctggcagagaagtggaggaagaagcggaggaccctgatgaagaggat
gagggagcaatcaacagtattatacaccacagagaaaggagacactttcctcacagagat
gtgcagatgggtagggatgtggatagagactgggaaaaagatcatacacgggagaaaatg
agatatgacaccagagagaggcctccagagccacaatccacacacagtgtggtccgtgct
cgctccctgtcctggatccgcacagctcctgcagagcttggccctggcaggaaaggggga
ggaacaggaagaggaggaggaggagagaagggagctgatactccacctaaactgagcaag
tcttcacttcttttcccccaaaagtcctccctctctgcccttgccagccgtgccaaacag
atcctcagcaactccgcccacagcaacaacttccacgacaacaacaacaacaagctcact
ggaaacaagaaggagaagagggaggagaacaagatctatatcactaggccccggcctgcc
agggacagggagagggagagggagcagcgtcgagagaggagggaggaaagggcatctcgc
cacccaagagaggtattcccgggtgtatttctctaccaaactgggaagaccaccaggctg
gtcaacctgggttccaaaggacatgctgcaggcataacaggaggtaggagcctagttagt
gcccctcacctgtggccaaatcctcctacaaaggaggaaaagacactttctcacaacgga
agcatcaacatgcagaaggaaagtgtacagaagtctgcaaacagggcagcagtggcaaaa
caaccagacaaaagcaagatgagagggcaacaccaggctttaaagactactgtcactgct
gatctgctaagcaaaggagatcctcaaacatctctgtcccatcacaaagatccccctccc
cctacccttccacgtctgaactccacagaaaatacgctacaaggtcagtcacgggtcacc
tcttacctcaggacctcagagattacagagtcccagcaacagccagatccagaccccaac
ccagcagaactggaccaggatacaaatcactctaatcctgaccccgacccagaccctgag
ccagaaccagaggagggagagatgtcggactacagctacgaggaggtcgaggccagacca
ggctgggcggaagagagcatcaactggcagaggaccttctctgtcaatccaatggacttt
gagctgctgcgctctgactggaatgacctgcgctgcaatgtgtctggcaacctgcagctg
gcagagagtgaagtggtggacgtgttggcgcagtacatggagaaactcaacgaacgcaac
ggagggatctacaccttgctgcgaatcatcaacgttgagaagcggcgcgactcggcgagg
gggaaccgttacctggtggagctggagctaatggagagaggccgtagcgtggtgcgtctt
tctgaatacatttacctgctgctccaccgcggcaggcaaggagacgaaagcctagagaac
actgactctgctccggcctcggctccggcttcagccacctcggctgccacgtctagcctc
accaccccaccaccccctccctccaccaggtcctctgcccggcctggagcaacaccctcg
agcaccgtttacgccaaacctctgctctgccagccggtcatgctgcagtggaggaaagat
gtcatggtgcactttgtggtaccagtgaaaaaccaggctcgttgggtgcagcagtttatc
tccgacatggagaatcttcatcgtcagaccaaggacgacaatttcagcatcatcatcgtt
gactttgagagcgaagacatggatgtggagcaggcgcttagagaaagcagtgtacctaga
tatgaatatcttaggagagaagggaactttgagcgctcagcaggactgcagatcggagtg
gacaccattgaggatagccacagcattgtgttcctgtgtgatctgcacattcacttccct
ctcaacatcttggagagcatcaggaagcactgtgtggagggacgtcttgcttttgcacct
attgtcatgagactcagctgcggcagttcaccacaggagcctgatggttactgggaggta
aatggcttcggtctgtttggaatctttaagtccgattttgataagattggagggatgaac
acagaagaattcaaagaccgctggggtggagaggactgggagctgctggacagggtgctg
cagaatggtttggaagtagagaggttacgcttgagaaacttctttcactactaccactcc
aaacgaggcatgtggaatgcccaaaacaagaaaactcctaaaggatag
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