Scomber scombrus (Atlantic mackerel): 133982416
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Entry
133982416 CDS
T10651
Symbol
fads2
Name
(RefSeq) acyl-CoA 6-desaturase
KO
K10226
acyl-CoA 6-desaturase (Delta-6 desaturase) [EC:
1.14.19.3
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00592
alpha-Linolenic acid metabolism
ssco01040
Biosynthesis of unsaturated fatty acids
ssco01100
Metabolic pathways
ssco01212
Fatty acid metabolism
ssco03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
133982416 (fads2)
01040 Biosynthesis of unsaturated fatty acids
133982416 (fads2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
133982416 (fads2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ssco01004
]
133982416 (fads2)
Enzymes [BR:
ssco01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.19 With oxidation of a pair of donors resulting in the reduction of O2 to two molecules of water
1.14.19.3 acyl-CoA 6-desaturase
133982416 (fads2)
Lipid biosynthesis proteins [BR:
ssco01004
]
Desaturase
Front-end
133982416 (fads2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FA_desaturase
Cyt-b5
GH-E
Motif
Other DBs
NCBI-GeneID:
133982416
NCBI-ProteinID:
XP_062277447
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Position
6:24521689..24527768
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AA seq
445 aa
AA seq
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MGGGGQLTEPGEPGSGRGGSVYTWEEVQSHCSRNDQWLVINRKVYNITHWAKRHPGGVRV
ISHYAGEDATDAFAAFHPDPKFVQKFLKPLLIGELAATEPSQDRNKNAAIIKDFQTLRGN
AEREGLFQARPLFFCLHLGHILLLEALAWLIVWLWGTSWTLTLLCSVILATAQAQAGWLQ
HDFGHLSVFKKSSWNHFLHKFIIGHLKGASANWWNHRHFQHHAKPNIFSKDPDVNMVHVF
VVGATQPVEYGVKKIKHMPYHRQHQYFFLIGPPLLIPVYFHIQIMRCMISRHDWVDLAWS
MSYYLRYIFCYLPLYGLFGSMALISFVRFLESHWFVWVTQMNHLPMDIDHEKHKDWLSMQ
LHATCNIEQSHFNDWFSGHLNFQIEHHLFPTMPRHNYHQVAPLVRALCEKHGIPYHVKTM
CQGVVDVVRSLKNSGDLWLDAYLHK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtggaggccagctcacagagccaggtgagccaggcagcgggcgaggtggcagt
gtgtacacctgggaggaggtgcagagccactgcagcaggaatgaccagtggctggttatc
aatcgcaaggtttataacatcacacactgggccaagaggcacccagggggggttcgtgtc
atcagccactatgctggagaggatgccacggatgcgtttgctgcttttcacccggatcca
aagtttgttcaaaagttcctgaagcccctgctgatcggagagctggcagcaacagagccc
agccaggaccgaaacaaaaatgctgccatcataaaggatttccaaactttacgtggtaac
gcagagagagagggtctgtttcaagcccggcctttgttcttctgcctccaccttggtcac
atcctgctgctggaggccctcgcctggctgatagtgtggctctgggggacgagctggacg
ttgacgctgctgtgctccgtcattttggccactgctcaggcgcaggccggatggctgcaa
cacgacttcggtcacctgtctgtattcaaaaagtctagctggaatcactttctgcacaag
tttatcatcggccatttaaagggagcttctgccaactggtggaatcaccgacatttccag
catcatgcgaaacccaacatcttcagtaaagaccctgatgtcaacatggtgcacgtcttt
gtagttggagccactcaaccagtagagtacggtgtaaaaaagataaagcacatgccctat
catcgccagcaccagtacttctttctcatcggacctccgctgctcattccagtttatttc
cacattcagataatgcgctgcatgatctcccgccacgactgggtggatctggcttggtcc
atgtcctactatcttcgttacatcttctgttatttaccgctatatggcctgtttggatca
atggcgctcatcagcttcgtcaggtttctggagagtcactggttcgtgtgggtgactcaa
atgaatcatctgccgatggatatagaccacgagaagcacaaggactggctgagcatgcag
ttacatgccacctgcaatattgagcagtcccacttcaacgactggttcagcggacacctc
aacttccaaattgaacaccatctgtttcctacgatgccgcgccacaactaccaccaggtg
gcccctctggtccgtgcactgtgtgagaaacatgggattccttaccatgttaagacaatg
tgccaaggcgtcgttgatgtagtcaggtcactgaaaaactcaggggacctctggcttgat
gcatatcttcataaatga
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