Scomber scombrus (Atlantic mackerel): 133982524
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Entry
133982524 CDS
T10651
Symbol
acta1b
Name
(RefSeq) actin alpha 1, skeletal muscle b
KO
K12314
actin, alpha cardiac muscle
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04260
Cardiac muscle contraction
ssco04261
Adrenergic signaling in cardiomyocytes
ssco04814
Motor proteins
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
133982524 (acta1b)
04820 Cytoskeleton in muscle cells
133982524 (acta1b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
133982524 (acta1b)
04261 Adrenergic signaling in cardiomyocytes
133982524 (acta1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133982524 (acta1b)
04147 Exosome [BR:
ssco04147
]
133982524 (acta1b)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
133982524 (acta1b)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
133982524 (acta1b)
Exosomal proteins of bladder cancer cells
133982524 (acta1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
133982524
NCBI-ProteinID:
XP_062277567
LinkDB
All DBs
Position
1:15706967..15711140
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AA seq
377 aa
AA seq
DB search
MCDDDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDAGDGVTHNVPVYEGYALPHAIMRL
DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETAYNSIMKCDIDIRKDLYANNV
LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
KQEYDEAGPSIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgacgatgaaactaccgctcttgtgtgcgacaacggctccggccttgtgaaa
gctggcttcgccggagatgatgcccccagggccgtgttcccctccatcgtcggccgccct
cgtcaccagggtgtcatggtcggtatgggtcagaaggactcctacgtcggcgacgaggcc
cagagcaagagaggtatcctgactctgaagtaccccattgagcacggtatcatcaccaac
tgggacgacatggagaagatctggcaccacaccttctacaacgagctgagagtggccccc
gaggagcaccccaccctgctcactgaagccccactgaaccccaaggctaacagggagaag
atgacccagatcatgtttgagaccttcaacgtccccgccatgtatgtggccatccaggct
gtgctgtccctgtacgcttccggccgtaccaccggtattgtgctggatgctggtgatggt
gtgacccacaacgtcccagtctatgagggttacgccctgccccacgccatcatgcgtctg
gatctggctggtcgcgatctgaccgactacctgatgaagatcctgactgagcgtggctac
tccttcgtgacaaccgctgaacgtgagatcgtgcgcgacatcaaggagaagctgtgctat
gtggctctggactttgagaatgagatggccaccgctgcctcctcctcctccctggagaag
agctacgagcttcccgacggtcaggtcatcaccatcggtaacgagaggttccgttgccct
gagaccctcttccagccttccttcattggtatggagtctgctggtatccatgagaccgcc
tacaacagcatcatgaagtgcgacattgacatccgtaaggatctgtacgccaacaatgtc
ctctccggtggtaccaccatgtaccctggtattgctgaccgtatgcagaaggaaatcact
gctctggcccccagcaccatgaagatcaagatcattgctcctcccgagaggaagtactcc
gtctggatcggtggctccatcctggcttccctgtccaccttccagcagatgtggatctcc
aagcaggagtacgacgaggcaggccccagcattgtccacaggaagtgcttctaa
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