KEGG   Scomber scombrus (Atlantic mackerel): 133983415
Entry
133983415         CDS       T10651                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 3-like
  KO
K07968  beta-1,4-galactosyltransferase 3 [EC:2.4.1.90 2.4.1.38 2.4.1.-]
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco00510  N-Glycan biosynthesis
ssco00513  Various types of N-glycan biosynthesis
ssco00514  Other types of O-glycan biosynthesis
ssco00515  Mannose type O-glycan biosynthesis
ssco00533  Glycosaminoglycan biosynthesis - keratan sulfate
ssco00601  Glycosphingolipid biosynthesis - lacto and neolacto series
ssco01100  Metabolic pathways
Module
ssco_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
ssco_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    133983415
   00513 Various types of N-glycan biosynthesis
    133983415
   00515 Mannose type O-glycan biosynthesis
    133983415
   00514 Other types of O-glycan biosynthesis
    133983415
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    133983415
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    133983415
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:ssco01003]
    133983415
Enzymes [BR:ssco01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     133983415
    2.4.1.90  N-acetyllactosamine synthase
     133983415
Glycosyltransferases [BR:ssco01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   133983415
  Glycolipid
   133983415
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C
Other DBs
NCBI-GeneID: 133983415
NCBI-ProteinID: XP_062278472
LinkDB
Position
7:25367984..25375748
AA seq 390 aa
MVSFQSKWLYLLIFLGIQLLVMALLSLGGYQERVTYFIRIFRKPEAPGLSNRNHSVANIT
GGDVYANLSHSPKPQSHGDAMPYCPKTSPLIGGPIHVSFPSGLTLADVQSKNTLVLRGGR
YRPPDCKARHRTAIIIPYRHRELHLKFLLYNMHPFLQRQQLNYGIYVIHQAGDYTFNRAK
LMNVGFREAMKEEDWDCLFFHDVDLIPEDDRNTYICDSNPKHAAIAMDKFGYKLPYKMYF
GGVSALTPLHYRKINGFPNNYWGWGGEDDDIGVRVSLAGMFISRPSSKVGRYKMIKHKRD
KGNDVNPKRFNMLAKTRQTWKRDGMNTVDYEVISRMYLPLYTNITVNIGTEAGLHPNPPK
PPPPAKAAEKPAAGAPAKGSTKLKENHSEK
NT seq 1173 nt   +upstreamnt  +downstreamnt
atggtcagtttccagtccaaatggctctaccttctcatcttcctgggcatccagctgttg
gtcatggcgctgctgtctctggggggctaccaggagagggtcacctacttcatccgcatc
ttccgtaagcccgaagcccctggtttgtcgaaccgcaaccactcagtagccaacatcact
ggaggggacgtgtatgccaacctctcccactcacccaaacctcaaagccatggagacgcc
atgccctactgccctaagacgtcccctctgataggtgggccgatccacgtcagctttccg
tcagggctcactctagcggatgttcagagtaaaaatacactggtgttgcgcggaggacgc
tacaggccacctgactgtaaggcgaggcatcggacggccatcatcattccctacagacac
agagagcttcaccttaagttcctgctctacaacatgcacccttttctgcagcggcaacag
ctcaactacgggatttatgtcattcatcaggctggagactacacttttaacagggccaag
ctgatgaacgtgggtttccgggaggccatgaaggaggaagactgggactgcctctttttc
catgatgtggacctcattccagaggacgatcgcaacacatacatctgcgactccaacccc
aaacacgcagccatcgccatggacaagtttggctacaagcttccttacaagatgtacttc
ggaggagtgtcagctctgacgccactgcactaccgcaaaataaatggctttcccaacaac
tactggggctggggcggagaggacgatgatattggagtcagggtgtctctggcggggatg
ttcatcagtcgtccatcttcaaaagtgggccgttacaagatgattaaacacaagcgggac
aaaggaaatgatgtgaacccaaagaggttcaacatgcttgccaagacgcgtcagacctgg
aagcgggacgggatgaacacagttgactatgaggtaatctcacggatgtacctgcccctc
tacaccaacatcactgtcaacatcggcactgaggccggtctacatccaaaccccccgaag
ccacctccacctgccaaagctgcagaaaaacctgcagccggagcaccagcgaaaggctca
accaaactcaaagagaaccactcagagaaatag

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