Scomber scombrus (Atlantic mackerel): 133983963
Help
Entry
133983963 CDS
T10651
Symbol
tlr18
Name
(RefSeq) toll-like receptor 18
KO
K10159
toll-like receptor 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04145
Phagosome
ssco04620
Toll-like receptor signaling pathway
ssco05132
Salmonella infection
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133983963 (tlr18)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
133983963 (tlr18)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133983963 (tlr18)
09171 Infectious disease: bacterial
05132 Salmonella infection
133983963 (tlr18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133983963 (tlr18)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133983963 (tlr18)
04054 Pattern recognition receptors [BR:
ssco04054
]
133983963 (tlr18)
04090 CD molecules [BR:
ssco04090
]
133983963 (tlr18)
00536 Glycosaminoglycan binding proteins [BR:
ssco00536
]
133983963 (tlr18)
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Phagocytosis
Toll-like receptors
133983963 (tlr18)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of breast milk
133983963 (tlr18)
Pattern recognition receptors [BR:
ssco04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
133983963 (tlr18)
CD molecules [BR:
ssco04090
]
Proteins
133983963 (tlr18)
Glycosaminoglycan binding proteins [BR:
ssco00536
]
Hyaluronan
Cell surface receptors
133983963 (tlr18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
S_100
TIR_2
LRR_9
LRR_NXF1-5
LRR_5
EF-hand_1
EF-hand_7
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
133983963
NCBI-ProteinID:
XP_062279163
LinkDB
All DBs
Position
7:complement(28549227..28562711)
Genome browser
AA seq
980 aa
AA seq
DB search
MMIGKLINFSALLLGTLTSPTPSPPSPPTTNIEKGPCHIFNSGRSANCLGQQLGSVPWKQ
FPSTLEAIDLSYNRLQAIHADDFLQLPQLRILRLQYNNISHIDDDAFKNNTLMEELNIFN
NSLQEIPATALTPLLNLKQLYMSNNFYKHATLADSFSKFVKLKVLSMGGPLVMGLKKEDF
QPLKNIRLHGFAIKCSSNLSYYEPGSLEVIQTLQMGFDMAIDQRPNALIDMLRDIANKKF
SIIQFRNLFEFMYYMGEKDIFQGLGDISANQIIFHRGKFNENLLKMALTNLQVSSIKRLT
LQYIDFARSPTFVDSGAGSSITNLALDNLDLWYISNPDVLRFDWRFTWFNKIKQLSIQYV
YFNSVPCDAWVEMEGVKFMDISNNRLKDEFVFNQQCVYKGTMPNLHTFNMSSNELASLKD
LSLLTREFRQMQVLDLSNNKLGSAEKSRDCVWQQNLTRLILHHNKFESEALRCLPITLHY
LDLSYCDLDQLDMTYFKKATSLKELLLSGNKIKFIPSKWESPSLQSLALDGNSFGLISKE
SFQDMPQLSRLRAGNNPYHCTCELYVFVQDTMSKTKVNLTDWPWNYRCYHPEALLNTVVS
KYFPGQVACDIRLVIIICVATTTVVILILMLICYIFDLPWYTKATYQIIRAKYRAHKEKA
AGEPGTFTYHAFISYSHSDAEWVRDELLPSLENNRNPYHLCIHERDFMPGKWIIDNIIDN
IESSRKVIFVLSINFVNSEWCNYELYFAQQRAMGKTFSDIILVLKEPIDPSSLPSKYCKL
KKMLSTKTYIEWPQHVNQQAFFWEQLKSVLGKPTMTRSRMHSAKSRTSSVRSISLMMEDQ
RPEVSMHNMDKEAEPKIEIIKRNDDLSNDKQIPVVALMNSQLEQAIEGLIKVFHSYSSKE
GDKYKLSKVELKSLLETELKDLMACANDPKGIDEIMSDLDENGDQELDFQEFVVLVAALT
VACNDFFEEFCKKEGKKAGK
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgatgattgggaaattgattaatttcagtgctctccttcttggaacactgacatcccca
acgccaagcccaccttcacctcccaccacaaacatcgagaaaggaccctgtcacatcttc
aactcaggtcgctctgcaaactgtctgggacagcagcttggcagtgtgccatggaaacaa
tttccatccacactagaagccatagatctctcctacaatagacttcaagctatccatgct
gacgacttcctccaactccctcagcttcgcatccttcggctgcagtacaataacatttca
cacattgacgatgatgcctttaaaaacaacactctaatggaggagcttaacatcttcaat
aactccctgcaggagattcctgccacagccttgactcctctcttgaatctaaaacagctg
tacatgtctaataacttttacaaacatgccactttggctgacagcttctccaaatttgtc
aaactcaaggttctgtctatgggtggtcctctggtgatggggctaaagaaagaagatttt
cagccattgaagaacatcaggttacatggctttgctatcaaatgctcctccaatctaagt
tactatgaacctggaagtttagaagtcatccagacactgcagatgggctttgatatggcc
atagatcaacggccgaacgctctcattgacatgctgcgtgacatcgccaacaagaaattc
agcatcatccagttccgtaacctctttgagttcatgtactacatgggagagaaggacatt
ttccagggtttaggggatatatcagccaatcagatcatcttccacagaggtaaattcaat
gagaacctactgaagatggctttaacaaacttgcaagtttcctctatcaaaaggttgaca
cttcagtacatcgactttgcccgttcacccacatttgttgatagtggagcaggttccagc
atcacaaatctagcactggataatctggatctttggtacatcagcaatcctgatgtgtta
cgatttgactggcgctttacctggttcaacaaaattaaacaactgtctattcagtacgtg
tacttcaactctgtgccttgtgatgcctgggttgagatggaaggtgtgaagtttatggat
atctcaaataatcgactaaaggatgagtttgtcttcaaccagcagtgtgtttataagggc
accatgccaaatcttcacactttcaacatgagctccaatgagctggccagtttaaaagac
ttgtcattactaacaagggagttccggcagatgcaagtgttggatttaagcaacaacaaa
ctgggatccgctgaaaaaagtcgggactgtgtttggcaacaaaatctcactcggcttatc
cttcaccacaataaatttgaaagtgaagcccttcgttgtctgcccatcacactgcactat
ttggacctgtcatactgtgacctggaccagctggacatgacatactttaagaaagctacc
agcctgaaagagctcctgctgagtgggaataaaatcaagttcatcccatctaagtgggaa
agtccatcactgcagtcgctggctttggatgggaattcatttggtctcattagcaaggaa
tcctttcaggacatgcctcaactatctcgcttaagggccgggaacaatccttaccattgt
acttgtgagctttatgttttcgtccaggacacaatgtcaaaaacaaaagttaacctgaca
gactggccttggaactacaggtgttaccatccagaggccttactgaacacagtcgtatcc
aaatacttcccaggtcaagtggcatgtgatatcagactagttattatcatctgtgttgcg
acaactacagtagtgatcttgatattgatgctgatttgctacatttttgacctcccgtgg
tatactaaagccacgtatcagataatcagggcaaaatacagagctcacaaggaaaaagca
gcaggagaaccagggacttttacttatcatgccttcatatcatacagccactctgatgca
gaatgggtgagggacgagctcttgcccagtttggagaacaacaggaatccctatcatctg
tgtattcatgaaagggacttcatgccagggaagtggattatcgataacatcattgacaac
attgaaagcagccgtaaggtaatatttgtcctctcaataaactttgttaacagcgagtgg
tgcaactatgagctgtacttcgctcagcaaagagcaatgggaaagacctttagtgacatc
atcctcgtgttgaaggagcccattgatcccagctccctgccaagcaaatactgcaagctt
aagaagatgttgagtaccaagacctacatcgagtggccacagcacgtcaaccagcaggca
tttttctgggagcagcttaagagtgttctgggcaagccaacgatgactcgatcgaggatg
cacagtgctaagagcagaacctcatctgtgcgaagcatttctttgatgatggaagatcag
aggccagaagtttcgatgcataatatggacaaagaagcagaacccaaaatagagattatt
aagaggaatgatgatttgtccaatgacaaacaaatcccagtggtggcattaatgaactcc
cagctggaacaggctattgagggcctcatcaaagtgtttcactcctattcgtcaaaagaa
ggcgacaagtacaagctgagcaaagtagagctgaagagtctgttggagacagaactcaaa
gaccttatggcatgtgccaatgacccgaaggggatcgacgagattatgtctgacctggac
gaaaatggagaccaagaattagacttccaggagttcgtcgttctggtcgcagcgctgacc
gtcgcctgcaatgatttcttcgaagaattctgcaagaaagaggggaagaaagccggaaaa
tag
DBGET
integrated database retrieval system
