Scomber scombrus (Atlantic mackerel): 133985156
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Entry
133985156 CDS
T10651
Symbol
fbn1
Name
(RefSeq) fibrillin-1
KO
K06825
fibrillin 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04350
TGF-beta signaling pathway
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133985156 (fbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133985156 (fbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ssco00536
]
133985156 (fbn1)
Glycosaminoglycan binding proteins [BR:
ssco00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133985156 (fbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF
hEGF
FXa_inhibition
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_PEAR1L
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
133985156
NCBI-ProteinID:
XP_062280722
LinkDB
All DBs
Position
1:complement(27823808..27886257)
Genome browser
AA seq
2913 aa
AA seq
DB search
MPDSKCEGRLLQLAVALVALLSLCVELGDAAEVVDTGDSELVTKQTDSRASRAKRRGGTD
VLRGPNVCGSRNNAYCCPGWKTLTGGNQCIVPICRSSCGDGFCSRPNMCTCPNGQISSSC
GSKSVQHCNIRCMNGGTCAEDNCLCQKGYVGNHCGQPVCENGCLNGGRCVAPNRCVCTYG
FTGAQCERDYRTGPCFASVNNQMCQGQLTGIVCTKTLCCATVGRAWGHPCEMCPAQPHPC
RRGFIPNHRTGACQDVDECQAIPGICAGGNCINTVGSFECKCPAGHKFNEISQKCEDLDE
CSNIPGLCSVGECSNTVGSFFCKCPQGYYTSVDGSRCIDARGGYCYASLVNGRCANQNSQ
LLTKMQCCCDSGRCWSDGSTPEMCPIRGTEEHQKLCIQMPDGTGGGRVPGGPDLPGIYPV
PFPGLTPGQGPGVIPGQIPIQVPGHVPGQIPPQIPGQVPGQFPYPGQFPGQLPIQPPPGP
AIIQTQNITNMCQAYRNLCLNGRCIPMPGIGYRCECNMGFKLDGRGECIDDDECDRSPCA
HGECVNTPGSYICQCPAGFQTTATRTECRDLDECVANGRICNNGRCVNTEGSFHCVCNAG
FEISADGKNCQDQDECLIRNMCLNGLCINDDGSFKCICKSGFLLDNSGRMCVDIDECETP
GMCMNGHCVNTEGSFRCECMAGMAVGLDGRVCVDTHMRSSCYGGYKRGQCVRPLFGAVTK
SECCCASTEYAYGEPCQPCPPQSSAEFLALCPNGIGLSVDGRDINECALDPDICQNGVCE
NMLRTYKCTCNEGFEVDLTGKNCIDIDECLMNRRLCENGLCRNTPGSFTCQCPKGYSFDS
ETDVCEDVNECDSSPCINGDCVNSQGSYVCLCSTGSSLDSTGLECIETTKSTCWLKFVNN
RCEVNINGATLKSHCCATLGEAWNSPCAKCEKDPICGKGFARVKGNVCEDVDECQVFPGV
CINGKCINTQGSFFCQCPPGMTVDVSGRMCIDLRTEQCYLTHEDERCGAPVPGKHRVDAC
CCSVGVAWGPECDECPEKGTPDYTQLCPRGPGFSHRGDFINGRPFLKDINECRMINTLCS
NGRCRNTIGSFRCRCDNGYALDSDERNCTDIDECRISPDLCGQGRCVNTPGDFECECFEG
YESGFMMMKNCMDIDECERNPLLCRGGDCVNNEGSFQCVCPEGHEIAPDSSACLDINECE
LSDKLCRNGQCVNMIGRYQCSCDTGYKSTENRLDCVDIDECTIENGGCEAFCTNSEGSYE
CSCHTGYALMPDLRSCTDIDECEESPDICDGGQCTNTPGTYQCLCFDGFMSSEDMKTCLD
VDECELNPNICLSGNCENTKGSFICHCDMGYSVRKGTTGCTDINECEIGAHNCDRHATCT
NTAGSFKCNCAPGWIGNGLKCTDLDECSNGTHMCSNNADCLNTMGSYRCACKEGFSGDGF
YCSDSDECAENGNLCESGHCLNLPGGFRCECDMGFIPTPDGKACEDIDECTFSDICVNGR
CQNIPGLFRCECNRGYELDRSGGNCTDINECADPTICINGMCVNIPGSYHCDCPPDFELN
PTRVGCVDTRSGSCYLDVRSRGDASESLDCSNEIGVGVSKASCCCSLGQGWGNPCESCPS
VNSTEYKTLCPGGEGFRPNPITVILEDIDECQELPGLCQGGQCINTFGSFQCECPKGYAL
NTETRVCEDINECERPGICGPGQCYNTIGNYTCICPVDYMQVNGGNNCMDMRKSYCYRNF
YSDNGTCDGELTFNMTKKMCCCSYNIGRAWNKPCEQCPVPSTDEFAILCGSERPGYYIDI
TTGQVIDIDECREIPGVCENGVCINMIGSFRCECPIGFIYNDKLLICEDIDECQNGPVCQ
QNAACLNLPGSYRCECKPGYRFTPTGQCLDRNECIENPGVCNPGQCIDTLGSYRCLCPNG
FKTTRDESMCVDVDECERQPCGNGTCKNTVGSYNCLCYPGFQNSHNSDCIDTDECSTQRG
LCRNGQCVNTVGTFLCVCNDGYELTLDGRMCADINECAVNPGTCGAGTCLNLDGSYRCIC
PPGYYLHEETCEDIDECSQSPEICTFGTCSNTEGSFTCLCPEGFELSSSGRRCLDIRVNY
CYTKFENGRCLSPKPQNTTKAACCCTAMPGQGWGDPCEICPSKGQDVYPLLCPNEGYQRG
PDDHPKDIDECLNDPCVNGQCINTDGSFRCECPMGYRLDISGITCEDTNECDIGNPCGNG
TCTNVIGGFECACDDGFEPGPMMTCEDINECAQNPLLCAFRCVNVVGSYECKCPTGYVLR
EDKRMCRDQNECEDGLDDCASRGMTCKNLIGTYMCICSPGYTRQPNGEGCMDLNECTAKP
GICKNGRCENTVGSYRCRCDQGFIANPTQTECVDNREGFCFTEVLTTLCQMTSSNRNLVT
KSECCCDGGRGWGTNCELCPLPGTTQYKKMCPLGPGYTTDGRDIDECRVMGNLCKNGQCI
NTLGSFSCTCKPGYTTDITGSLCVDVDECIQAPKPCNFICKNTEGGYLCSCPRGYNLQED
GKSCRDLDECSTKQHNCQFLCVNTIGGFTCKCPPGFTQHHTACIDNNECATDPNLCGSNG
MCQNTPGSFNCDCQRGFSLDPNGQSCEDMDECDGNHRCQHGCQNLVGGYRCSCPQGYLQH
YQWNQCVDENECLNTQICGGASCHNTLGSFRCLCPTGFNYEQTNGGCSDVNECSTTQNPC
KFGCSNTDGGYLCGCPPGYFRAGQGHCVSGLGFGSGGSGAGQGGEVDDNSLSPEACYECK
INGYPKKGRKRRSTNSTQEDLLEDMQLTEEVVSLASVDIENTLQFHLNISDLSNRDHILE
FTPALSTLSDHVRYNIDYGNEEGYFKINQREGVSYLHLTKKKALSPGAYQLQISSMALYR
KKELAELEDRHDKDYLTGQLGEILKMRVQIILH
NT seq
8742 nt
NT seq
+upstream
nt +downstream
nt
atgccggatagtaagtgtgaaggacggctgctgcagttggccgtggctctggtggccttg
ctgtcgctctgcgtcgagcttggagacgctgcagaggtggtggacaccggggacagcgag
ctggtgaccaagcagaccgactccagagccagcagggccaagaggagaggagggacggac
gtcctcagaggacccaatgtgtgcggctcaaggaacaacgcctactgctgcccaggctgg
aagactctgactggagggaaccagtgtattgttccgatctgccggagttcatgtggagat
ggtttctgctccagacccaacatgtgcacctgccccaacggccagatctcctcgtcctgt
ggatccaagtcagtccagcactgtaatattcgttgtatgaatgggggaacatgtgctgag
gacaactgcttgtgtcagaaaggctacgtgggaaaccactgtggtcaaccggtatgtgaa
aatggctgtcttaacggaggaaggtgtgtggctcccaacagatgtgtgtgtacctacggc
ttcaccggggctcagtgtgagagagactaccgcactgggccgtgctttgcctctgtgaat
aaccagatgtgtcaaggccagctcacaggcattgtgtgcacaaagactttgtgctgtgcc
acagtgggacgggcgtggggtcacccttgtgagatgtgcccagcccagcctcacccctgc
cggagagggttcataccaaaccaccgcaccggggcgtgccaagatgtggatgagtgccag
gccatccctggcatctgtgcaggaggaaactgtatcaacacagtgggatcctttgaatgt
aaatgccccgctgggcacaagttcaatgagatctcacagaaatgtgaagatctggacgag
tgttcaaacatcccaggtctctgcagtgtaggcgaatgctctaatactgttggcagtttc
ttctgcaagtgtccccagggatattacacctcagtggacgggtccaggtgtatagatgct
cgtggtgggtactgctacgctagtctggtgaacgggcgctgcgccaaccaaaactcgcag
ctgttgactaaaatgcagtgctgctgtgatagtggtcgctgctggtcggatgggtccacc
cctgaaatgtgccccattcgtggaacagaagagcaccagaaactgtgcatccagatgcct
gatgggactggtggaggtcgtgttccagggggccccgacctacccggtatctacccagtt
ccatttcctggtctaactcctggtcaaggacctggagtcattcctggtcaaattccaatc
caggttccaggacatgtccctggccaaattccaccacaaatccctggacaggtcccagga
caattcccatatccaggccagtttccgggacaattaccgatacagcctcctccaggtcca
gctataatccaaacccagaatatcaccaacatgtgtcaggcctaccgcaacctctgcctg
aatggcaggtgcatccccatgcctggcattggttaccgctgtgagtgcaacatgggcttc
aagttggacggaaggggagagtgcatcgatgatgatgaatgtgatagaagcccgtgtgca
catggagagtgtgtgaacacccctgggtcctacatctgtcagtgtcctgctggattccag
accactgcaactaggacagagtgtcgagatctggatgagtgtgtggccaatggtcgcatc
tgcaacaatgggcgctgtgtgaacactgagggaagcttccactgtgtctgcaatgctgga
tttgagatctcagcagatggcaaaaactgtcaagaccaggatgagtgtctcatcaggaac
atgtgcctcaacggactgtgtatcaacgatgatggcagctttaaatgcatctgtaaatct
ggcttcctgcttgacaacagtggacgcatgtgtgtagacattgatgaatgtgagactcca
ggcatgtgtatgaacggtcactgcgtcaacacagaggggtctttccgttgtgagtgtatg
gctggaatggcggtgggccttgatgggcgggtctgtgttgacacacatatgcggagttcg
tgttatggtggctacaagcgagggcagtgtgttaggcctttatttggagctgtgaccaag
tctgaatgctgctgtgccagcacagagtacgcctacggagagccgtgccaaccttgccca
ccacaaagctctgctgagttcctggctttgtgtcctaatggtattggcttatccgtcgat
ggaagagatattaacgaatgtgccctcgaccctgacatctgccagaatggagtgtgtgag
aatatgctgaggacatacaaatgcacctgcaatgaaggctttgaggtagacctgacaggc
aaaaactgtattgatattgatgagtgtctgatgaacaggcgtctgtgtgaaaatggtctg
tgcaggaacacaccaggcagtttcacttgtcagtgtcccaaaggatacagctttgattct
gagacggacgtctgcgaagatgtgaatgagtgtgattctagcccatgtataaatggagat
tgtgtgaacagccaagggtcatatgtgtgtttgtgttcgacgggcagttcactggacagt
actggactagagtgtattgagactaccaagagtacctgttggctgaagtttgtcaataat
cgctgtgaggtcaacataaacggggctacactgaagtctcattgctgtgccacactggga
gaagcctggaacagcccgtgtgccaaatgtgaaaaagatccaatctgtggtaagggcttc
gctagagtcaagggaaatgtctgtgaagatgtggatgagtgccaagtgtttcctggagtg
tgtatcaacggcaagtgcatcaacacacaaggctccttcttctgccagtgccctccagga
atgactgttgatgtcagcggcaggatgtgcattgacctgcgtacggagcagtgctatctg
acccatgaggatgagcgctgtggggctcctgtcccagggaaacaccgtgtggatgcctgt
tgttgctcagtgggtgtggcctggggccccgagtgtgacgagtgtccagagaagggcact
ccagattacacccagctctgtcctcgtggacctggcttctcccacaggggtgacttcatc
aacggcaggcccttcctcaaagatataaatgaatgtcgaatgataaacaccttgtgctca
aatgggaggtgtagaaacaccatcggcagcttccggtgtcgctgtgataacggatatgct
ctggactcagatgaaaggaattgcactgacattgacgagtgccgcatctctccggacctg
tgtggacagggcaggtgtgtcaacacaccaggagattttgaatgcgagtgttttgaagga
tatgagagtggcttcatgatgatgaaaaactgcatggacatcgacgagtgtgagcgtaac
cctctgctgtgccgtggaggggactgtgtaaacaacgagggcagcttccagtgtgtgtgc
cccgagggacacgagatcgcgcctgacagctcggcctgtctagatatcaatgaatgcgag
ttgagtgacaagctgtgccgaaacggccaatgtgtcaatatgatcggccgctaccagtgt
tcctgcgacacaggatacaagtctactgagaacagactggactgtgttgacatcgacgag
tgtaccattgagaacggtggctgtgaggctttctgcacaaactcagagggcagctatgag
tgtagttgccacactgggtacgccctgatgccagatctgaggagttgtaccgatattgat
gagtgtgaggagagcccagacatttgtgatggaggccagtgtaccaacactccagggacg
taccagtgtctctgctttgatggtttcatgtcctctgaagatatgaagacctgcctggat
gtggatgaatgcgagctgaacccaaacatctgtctgagtgggaactgtgagaacactaag
ggatccttcatctgtcactgtgacatgggatactctgtacgcaaaggaaccaccggctgc
acagatatcaacgagtgtgagattggagcccataactgtgacaggcatgctacctgcacc
aacacagccggcagcttcaaatgcaactgtgctccagggtggattggcaacggccttaaa
tgcacagacctggacgagtgctccaatggtacacacatgtgcagcaacaacgctgattgt
ctcaacaccatgggctcgtatcgatgtgcgtgcaaggagggattctccggagatggattc
tactgctcagacagcgacgagtgtgcagagaacggcaacctgtgtgagagtggccattgt
ctgaacctgccggggggtttccgctgcgaatgtgacatgggcttcatccccactcctgat
ggcaaggcttgcgaggacatagacgaatgtaccttttctgacatctgtgtcaatggacgt
tgccagaatatcccaggccttttcagatgtgaatgtaaccgtggttatgaactggacagg
agtggaggcaactgcacagatataaatgaatgtgcagacccaaccatctgtattaatgga
atgtgtgttaacatccctggaagttaccactgtgactgcccgccagactttgaacttaac
cccacccgggtgggctgtgtagacactcgctctggaagctgctacctggacgttcgttcc
cgcggagatgcgtcagagagcttggactgctccaatgagatcggggttggtgtttccaag
gcatcttgctgctgctccctgggccagggctggggaaatccatgtgaatcatgcccttct
gtcaactcaacggagtacaagacattgtgtcccggaggagaaggctttagacccaacccc
atcactgtcatcttggaagacatagacgagtgccaggagctgccaggcttgtgccaggga
ggacagtgcatcaacacctttggcagcttccagtgtgaatgcccgaaaggttacgcactt
aacacagagaccagagtctgtgaagatatcaatgagtgtgaacgaccaggtatctgtggc
ccaggccagtgctacaacaccatcgggaactacacctgtatctgccctgtggattacatg
caagtcaatggagggaacaattgcatggatatgaggaagagctactgctacaggaacttt
tactctgataacgggacatgtgatggagagctgacctttaacatgaccaaaaagatgtgc
tgctgctcctacaacattggccgtgcatggaataaaccctgtgagcagtgtcctgtgccc
agcactgatgaatttgccatcctgtgtggcagtgagagaccaggatattacattgacatc
accactggacaggtcattgatattgatgagtgcagggaaatcccaggagtgtgtgagaat
ggagtgtgcatcaacatgatcggtagcttcaggtgtgagtgccccattggcttcatctac
aatgacaagctgctgatttgcgaagatattgatgagtgtcagaatgggccagtgtgccag
cagaatgccgcctgtctgaacttgccaggaagctaccgctgtgagtgtaaacctggatat
cgcttcacccccactggacaatgtctagaccgtaatgagtgcattgagaaccccggtgta
tgcaatcctggtcagtgcattgacactttggggagctaccgctgcctctgccccaatggc
tttaaaacaacgcgggacgagtcgatgtgtgttgatgtggacgagtgtgagagacaaccc
tgtggcaatgggacctgtaaaaacacagtgggctcctacaactgtctctgctaccccggc
tttcagaattcacacaacagtgactgcatagacaccgatgagtgttcgacccagaggggc
ctgtgtcgtaacgggcagtgtgtaaatactgtgggaaccttcctctgtgtgtgcaatgat
ggatatgaacttactctagatggcagaatgtgtgcagatatcaatgaatgtgcagtgaat
ccaggcacatgtggcgctggcacttgtctgaatctggacggctcttacaggtgtatctgc
ccacctggctactatctccacgaggaaacctgtgaagatattgatgagtgctcccagtcg
ccagagatctgtacatttgggacctgctccaacaccgagggaagcttcacctgcttgtgt
cctgaaggattcgagctttcctcctctggacgcagatgtttagatatacgtgtgaactac
tgctataccaagtttgaaaatgggcgctgcctgtctccaaaaccccagaacactaccaaa
gccgcatgctgctgcactgcaatgcctggtcaaggctggggagacccctgtgaaatctgc
cccagcaagggacaggatgtgtatcctcttctctgtcccaatgagggatatcaacggggg
ccagatgaccatccgaaagatattgatgaatgcctcaatgatccttgtgttaatggccag
tgcatcaacacagacggctctttccgttgtgaatgtcccatgggttaccgactggacatt
agcggaattacctgtgaagacactaatgagtgtgacattggtaatccctgtggcaacggc
acatgcactaacgtcatcggaggttttgagtgtgcatgtgacgacggctttgagcctggc
ccaatgatgacctgtgaagacatcaatgaatgtgcccagaatcctctgctgtgtgctttc
cgctgtgttaatgtggtgggctcctacgagtgcaaatgtccgacaggctacgtacttcgt
gaggacaagaggatgtgtagagaccagaatgagtgtgaagatggtcttgatgattgcgcc
agcagaggcatgacctgcaagaacctcattggtacatatatgtgtatctgttcccctgga
tacacacgccagcccaacggagagggttgcatggatctgaatgaatgtacagccaaacca
ggcatctgtaagaacggccgctgtgagaacacagtgggaagctaccgctgcaggtgtgac
cagggattcatcgctaatcccacacagactgaatgtgttgataaccgcgaaggcttctgt
ttcactgaggttctgactactttgtgtcagatgacatcgagtaacaggaacttggtgacc
aagtcagagtgttgctgtgatggaggcaggggctggggcaccaactgtgagctttgcccc
cttcctgggaccacccagtacaagaagatgtgtcccctgggacctgggtataccactgat
ggaagagatattgatgagtgtcgtgtgatggggaacttgtgcaagaacggccagtgtatc
aacactttgggctcctttagttgcacctgcaaacctggctacaccactgacatcactggc
tctctgtgtgtggatgtggatgagtgtatacaggcaccgaaaccttgtaacttcatctgt
aagaacacagagggaggctacctctgctcctgcccccgcggatacaacctacaggaagat
gggaagagctgcagagatttggatgagtgttcaaccaaacagcataactgtcagttcttg
tgtgttaacaccatcggtgggttcacctgtaaatgtcctcctggcttcacccaacatcat
acagcctgtattgacaacaatgaatgtgcaacagaccccaatctgtgcggctccaatggt
atgtgccaaaacactccgggaagctttaattgcgattgccagcggggattctcattagat
cccaatggacaaagctgtgaagatatggatgagtgtgatggtaaccacaggtgtcaacat
ggctgtcagaacttagtgggtggatacaggtgcagctgtccacaaggctacctgcagcac
taccagtggaaccaatgtgtggatgagaacgagtgtctgaacacccagatatgcggggga
gcatcatgccacaacaccctggggagcttccgctgcctctgccccactggctttaactat
gagcagaccaacgggggttgctcagacgtcaacgagtgctccaccacccagaacccctgc
aaatttggatgctcaaacacagatggaggttatctctgtggttgtccccctggatacttc
cgagcaggacaagggcactgtgtctcaggtttgggctttggtagtggcggctctggtgct
ggacagggaggtgaggtggatgataattctctgtctcctgaggcctgctacgaatgtaaa
atcaatggctaccccaagaagggacgcaaacgtcgtagcaccaactcaacacaggaggat
cttctggaagacatgcagctgacagaggaggttgtcagtctggccagtgtggatattgag
aacaccctgcagttccacctgaacatcagcgacctgagcaatcgtgaccacatcctcgag
ttcacaccagccttatccaccctcagtgaccatgtgcgctataacatcgactacggaaat
gaagaaggctacttcaagatcaaccagagagagggcgtcagctacctgcatctgaccaag
aagaaggccctctccccaggggcgtaccaacttcagatcagcagtatggccctctacagg
aagaaggagctggctgagctggaggacagacatgataaagactacctcacaggacagcta
ggagaaatactgaagatgagggtgcagatcatcctccattaa
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integrated database retrieval system
