Scomber scombrus (Atlantic mackerel): 133985625
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Entry
133985625 CDS
T10651
Symbol
irg1l
Name
(RefSeq) immunoresponsive gene 1, like
KO
K17724
aconitate decarboxylase [EC:
4.1.1.6
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
133985625 (irg1l)
Enzymes [BR:
ssco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.6 cis-aconitate decarboxylase
133985625 (irg1l)
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GFIT
Motif
Pfam:
MmgE_PrpD_N
MmgE_PrpD_C
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
133985625
NCBI-ProteinID:
XP_062281266
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All DBs
Position
9:complement(21047178..21051365)
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AA seq
494 aa
AA seq
DB search
MSKIQKIINPAWAIRRLHNSAVKVLKHPAPEDTVTASFGKFISEVNSQHLSSLVLHRSKR
MVLDSVGVGLIGSTTDVFELALQHCQHMYARDDISSVYGRKSTRLSPTLAAFVNGVATHS
MDFDDTWHPATHPSGAVLPAVLALCDMMPTSSKPSGLDFLLAFNVGIEIQGRLMRFSNEA
HNIPKRFHPPTVVGTMGSAAACARLLGLDHSGCSHALAIAASLSGAPMANAATQSKPLHI
GNASRLGLEAALLASRGLEASPMVLDAVAGVAGFSAFYEDYVPQPLGSPNDEGHMFLLEE
QDMGFKRFPAHLGMHWVADAAASVHKLLVGAGHGTVSPAEVQDILLRVPHSKYINRPFPE
SEHQARHSFQFNACSALLDGEVTVQSFTPAAMTRPDLLALLSRVHVEHPHDNPANFNRMY
GEVQVTLVGGDILKGRCDTFYGHWRNPLTNESLRKKFRNNAGTVLTSEKVERLIEVLEEL
DRLEDCSPVLSLLQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatacagaaaatcattaatccagcatgggctatcaggcgactgcataattct
gcagtgaaagtcttgaagcacccagcccccgaggacactgttacagccagttttgggaag
tttatcagtgaagtgaattcccagcacttgtcctctttagtcctccaccgcagtaaaagg
atggtactggacagcgttggagttggtctgattggcagtactacagatgtgtttgaactt
gccctacagcactgccagcacatgtacgcccgtgatgacatcagctctgtgtatggacgc
aaaagcaccaggctttccccaacactggcagcttttgtcaatggagtggcgactcactca
atggactttgatgatacatggcaccctgccactcatccctcaggagcggtccttcctgct
gtgttagctctctgtgacatgatgcctactagcagcaaacccagtggcctagacttcctg
ctggcttttaatgttggcatcgagatccagggccggctgatgaggttctctaatgaggcc
cacaacatccccaagaggtttcaccctcccactgtagtggggactatgggaagtgcagca
gcctgtgctcgcctcttgggtttggatcactccggctgcagtcatgctttggccattgct
gcctctctatctggagccccaatggctaatgctgccactcagtccaaacccctccacatc
ggcaatgcctcacgtttaggactggaggccgctctgctggcctctcgaggcctagaggcc
agtccaatggtcctggatgctgtcgcaggggtagccggcttcagtgctttctatgaagac
tacgtgccgcagcctttgggctcacctaatgatgaaggtcacatgttcctgctagaggag
caggacatgggtttcaagcgcttccctgcacatctggggatgcactgggtggcagatgct
gcagcctcagtccataagcttcttgtgggggctggccatgggactgtgtccccagctgaa
gttcaggatatcctgctcagagtcccccactctaaatacatcaacaggcctttccctgag
tcagagcaccaggcacgccactcttttcagtttaatgcttgcagtgctctcctggacggt
gaggtgactgtgcagtctttcacccccgccgccatgacacgccctgacctgctcgctctg
ctgagccgtgttcatgtggagcatccccatgacaacccagctaattttaaccgcatgtat
ggcgaagtccaggtgacacttgttgggggagacatcctgaagggacgctgtgacaccttc
tacggacactggcgcaacccactgaccaatgagagcctgaggaagaagttcaggaacaac
gcggggacggtgcttacctccgagaaggttgagaggctgattgaagttttggaggagctg
gacagacttgaagactgcagccccgttctctcactgctgcagtga
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