Scomber scombrus (Atlantic mackerel): 133985738
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Entry
133985738 CDS
T10651
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133985738 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssco03400
]
133985738 (nthl1)
Enzymes [BR:
ssco01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
133985738 (nthl1)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
133985738 (nthl1)
Prokaryotic type
133985738 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-GeneID:
133985738
NCBI-ProteinID:
XP_062281420
LinkDB
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Position
2:complement(10429445..10432961)
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AA seq
402 aa
AA seq
DB search
MTSPYFMHSRARVTRRANLTAGCTPTASLGSKLTNSRRDEAPHSSVAVKAKEEEEEARIS
EQRPSSAPLSTGGCHELLQHTALQPKTESNAVPLSSPHRRRRQVKLEYDNDDAVLPVKTE
RWEPPEWRKQLGFIREMRSSRDAPVDSMGAEKCYDTEAPAHVRRFQVLVSLMLSSQTKDQ
VTAAAMQKLRAHGCTVENILATDDETLGKLIYPVGFWRNKVKFLKLTSAMLQKEFGGDIP
DSVEGLVRLSGVGPKMAHLAMGIAWNQVSGIGVDTHVHRISNRLEWLKKPTKNPEETRKA
LEEWLPRELWSEINWLLVGFGQQVCLPINPLCSMCLNQHSCPSAHKTSPTKRPKAGSPRS
PSPTSSFKAKTEPGSAVKDERIKEEPLPTPVSPTTHRRKKTH
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgacctctccttatttcatgcacagcagagccagagtcacccggagagctaacctgaca
gccggctgcacacctacggcctctctcgggtccaaacttaccaacagtcggagggacgag
gctccgcattcctccgtggcggtgaaggcgaaggaggaggaggaggaggcgaggatctct
gagcaaagaccctcctcggcccccttatccacgggtggttgccatgaactcctccaacac
accgctctgcagccaaaaacagaatccaacgctgtcccgctatcgtcacctcaccgaagg
aggaggcaggtaaagttggaatatgacaacgatgatgccgttttgccggtgaagacagag
cgctgggagccgcctgagtggaggaaacagttaggatttattcgtgagatgaggagcagc
cgtgacgcacctgtagacagcatgggagcagagaaatgctacgacacagaagctcctgca
cacgtgagacgtttccaggtattggtgtcactcatgctgtccagtcagacaaaggaccag
gtgacagcagcggctatgcagaagctccgagctcacggctgcactgtggaaaacatactc
gctaccgatgatgagacgttgggaaaactcatctaccctgtcggcttctggaggaataag
gtgaagtttctgaagctgacgtcggccatgctgcagaaggagtttggaggcgacatcccg
gacagcgtggaggggctggtccgcctgtcaggagttggacccaagatggctcacctggct
atgggcattgcctggaaccaggtgtccggtataggtgtggacacacatgtgcatcgcatc
tctaacaggctggagtggctcaagaagccgaccaagaacccggaggaaacacgcaaggcc
ctggaggagtggttacccagggagctgtggagtgagatcaactggctgctcgtggggttt
ggacagcaggtttgtctacccatcaaccctctctgctctatgtgtctgaaccagcacagc
tgcccgtccgcccacaagacctctcccactaagaggcctaaagctggatccccacgctct
ccaagtccaacttcttccttcaaagcaaaaactgaacctggatctgctgtcaaagacgag
aggataaaagaggagccactgcccacacctgtttcccccaccacacacagaaggaaaaaa
acgcattaa
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