Scomber scombrus (Atlantic mackerel): 133986036
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Entry
133986036 CDS
T10651
Symbol
sqstm1
Name
(RefSeq) sequestosome-1 isoform X1
KO
K14381
sequestosome 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04137
Mitophagy - animal
ssco04140
Autophagy - animal
ssco04217
Necroptosis
ssco04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133986036 (sqstm1)
04137 Mitophagy - animal
133986036 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
133986036 (sqstm1)
04218 Cellular senescence
133986036 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133986036 (sqstm1)
03029 Mitochondrial biogenesis [BR:
ssco03029
]
133986036 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133986036 (sqstm1)
Membrane trafficking [BR:
ssco04131
]
Autophagy
Mitophagy
Cargo receptors
133986036 (sqstm1)
Pexophagy
133986036 (sqstm1)
Aggrephagy
133986036 (sqstm1)
Xenophagy
133986036 (sqstm1)
ER-phagy
ER-phagy recepters
133986036 (sqstm1)
Other autophagy associated proteins
Midbophagy
133986036 (sqstm1)
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
133986036 (sqstm1)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133986036 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
133986036
NCBI-ProteinID:
XP_062281792
LinkDB
All DBs
Position
9:complement(110849..115529)
Genome browser
AA seq
453 aa
AA seq
DB search
MAVTVKAYLLGKDEVVKEIRRFAVDQDVSSSFEYLSKKTLSVFSNLQTCTMFYRDEDGDL
VAFSSDDELMMGLTCMKDDTFRLFIKERKEHRRDFPLHAFPPFSFTPPPPPGAPHAPPPH
LAPPPTLHPNVTCDGCEGAVVGTRFKCSVCPDYDLCSSCQAKGTHTEHALLPIWHPLQQW
FPRGKWMKRMRHCMWNQNQNQAQNQDQAQNQDQAQDQDQERPTAASQANVDFLKNIGEGV
AAMLSPLGIDVDIDVEHEGQRTKVTPPPQSEGPESAMETGGATREDGASREGGAKCEGGA
KCEGGAKCEGGANEGAKVSRDSDEEWTHLSSKEVDPSTGELQSLLNQDRDLNQDRDLNQD
PPDQQGPPDQQGPPDQQGPSGQQGPSGLREAALYPHLPQEADPQLVESLSHMLSMGFTDE
GGWLTRLLQAKNFDIGAALDAIQYAKQPRPHLP
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcacggtgaaagcctacctgctgggtaaagatgaagtagtgaaggagatccgc
aggttcgcggtggatcaagatgtttcctccagctttgaatatctgagcaagaaaacttta
tcagtgttcagcaacctgcagacctgcaccatgttctacagagatgaagatggggacctg
gtggccttctcctctgatgatgagctgatgatgggtctgacttgtatgaaagacgatacg
ttccgcctcttcatcaaagagaggaaggagcaccgtcgggactttcctcttcacgccttt
ccccccttctccttcacccccccccctccccctggagctcctcatgccccgccccctcac
ctagccccgccccccaccctccatcccaacgtgacctgtgacggctgcgagggcgccgtg
gtggggacccgcttcaaatgttcagtgtgtcctgactacgacctttgctcctcctgccag
gccaaggggacgcacactgagcacgctctgttgcccatctggcacccgctgcagcagtgg
tttcctcgggggaaatggatgaagaggatgagacactgcatgtggaaccagaaccagaac
caggctcagaaccaggaccaggctcagaaccaggaccaggctcaggaccaggaccaggag
cggcccactgctgcctcccaggccaatgtggacttcctgaagaacatcggcgagggcgtg
gcggccatgttgagcccgctgggtatcgacgtggacatcgatgtggagcacgaaggtcag
agaaccaaggtgacccccccacctcagagcgaggggcccgagagtgccatggaaacgggg
ggagccactcgtgaggatggggccagccgtgagggcggcgccaaatgtgagggcggggcc
aaatgtgagggcggggccaaatgtgagggcggggccaatgagggggcaaaggtgagcaga
gactctgatgaggagtggactcacctgagctccaaagaggtggacccgtctacaggagag
ctgcagtccctgctgaaccaggaccgggacctgaaccaagaccgggacctgaaccaagac
cctccagaccagcagggtcctccagaccagcagggtcctccagaccagcagggtccttca
ggccagcagggtccttcaggcctaagagaggcggctctgtatcctcacctgcctcaagag
gccgacccccagctggtggagtccctgtcccacatgctgtccatgggcttcacagatgaa
ggcggttggctgactcgactccttcaggccaaaaactttgacatcggcgccgcgctcgac
gccatccagtacgccaagcagccccgcccacacctgccctga
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