Scomber scombrus (Atlantic mackerel): 133986039
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Entry
133986039 CDS
T10651
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Cell adhesion molecules [BR:
ssco04515
]
Cadherins
Protocadherins
133986039
BRITE hierarchy
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Gene cluster
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Other DBs
NCBI-GeneID:
133986039
NCBI-ProteinID:
XP_062281797
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Position
9:complement(17226854..17229319)
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AA seq
821 aa
AA seq
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MTKRMGYRDWRWQALWWHHFFLLWSTIHGQTRYSIPEELKQGSVVGNLAKDLGLGLPDIF
DRELRVASEAGEQYFSVDAGKGELVVNDRIDREALCGQSASCLLPLQVVLENPLSLHRIE
VEIKDINDNSPRFHTKEMSLKIAESAAVGTRFLLESAEDSDVGSNSLKSYTLTKNDCFTL
KMKEVEDGKTVPELVLEKPLDREKKAVHRLLLTALDGGHPVMSGTSQITITVLDNNDNFP
VFDKNTYKVSVEENIAKDSFVIKIAATDADEGPNGEVEFSFGPRTPDSVSSVFEINSLTG
EIYLKGDLDYERASSYKIEITAKDKGVPVMESHCRVQIDVVDVNDNTPEIILTSEPKPVR
EDAPSGTVVALLNARDADSGNNSKVTLRLPKGSSFTLKPSFSNNYALVTSGRLDRETFSE
YNIEITATDSGSPPLSSKKIIPVSISDVNDNPPVFTQPSYNVYLKENGVPGSILYSVSAS
DLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDQ
GSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKPGHLVTKVTAVDAD
SGHNAWISYKLADATDASLFTVNQYTGEVRTKRAVSEQDDSSQKLLIEVKDDGEPVQSAT
VTVSILLEDGLHEPILDLRQKTMEPSKKTGRITLYLILSLASVSVLSLVTFLILAVKCIR
SSRSSGSCCMTRSDCDNYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCMSPMS
EYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSR
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaatgggttaccgagactggagatggcaggcgctttggtggcatcatttc
tttctcttgtggagtacaatacacggacagactcgatatagcatccctgaagaactaaaa
cagggatctgtggtaggaaatcttgccaaagatctgggtttgggactgccagacatattt
gaccgtgagctgcgtgtcgcctctgaggctggtgagcagtatttcagtgtggatgcgggg
aagggcgagctggtggtgaatgacagaatagacagagaggcgttatgcggtcaaagtgcc
agctgtttgctgccattgcaggttgttctagaaaaccctctaagtttacatcggatcgag
gtagaaataaaagatataaatgataattcacccaggtttcatacaaaagaaatgtctttg
aaaattgctgaatctgcagcagtcgggactcgttttcttttagaaagtgcagaagattca
gacgttggaagtaattcactaaaatcctacactttgactaaaaacgactgttttacgttg
aaaatgaaagaggttgaagatggcaaaacggtcccggagttagtgttagagaaacctctt
gaccgggagaagaaagccgttcatcggctactactgactgcattagacgggggacatcca
gtcatgtctggtacctcgcagataacaattacagtacttgataacaacgacaatttccca
gtatttgacaagaatacatataaagtttccgtagaggagaatattgcaaaagacagcttt
gttatcaaaattgcagcaactgatgctgacgagggaccaaacggagaagttgaattttct
tttggccccagaacaccagattccgtctcctcagtgtttgagataaattcattaacagga
gaaatatatttgaaaggagatttagattatgaaagagcctcgtcctataaaatagaaata
actgctaaagacaagggggttccagtgatggagagtcactgtcgtgtacagatagatgtt
gttgatgttaatgataatactccagaaattatcctcacgtctgaaccgaagccagtgcgc
gaagacgcaccaagtggcacagtagtggctttgctcaacgcgcgtgacgctgactctggt
aataatagcaaagtgacattaagactaccaaaaggttcttctttcactctaaaaccctca
ttttctaataattacgcgctagttaccagtggtcgtttagaccgagagactttctcggag
tataatattgagataacagccactgattcaggctctcctcctctgtccagtaagaaaatt
atacctgtcagcatctctgatgtgaatgataaccctcctgtattcactcagccctcctat
aatgtgtatctaaaagagaatggggtaccaggctctatactgtactcagtatcagcatct
gacctggattttggtgaaaacgctaaaatctcttactctatactggactctaaagtgcag
gatgtttctgtctcctcttatgtttacattaactcagataacggcagcatctacagcatg
cactcgtttgactatgagaaactgaaggtgtttcagattcaggttcaggcaaaggaccag
ggctctccgtctctcagcagcaacgctactgtccatgtttttatcctggaccagaacgac
aatgcccccgctgttatttacccctcctctgctgccctgggctccctctctcatcagagg
atgccccgctccgctaaaccgggtcacctggttactaaggtgacggccgtggacgctgac
tcgggccataacgcctggatctcctacaaactggcggatgccacagacgcctctctgttc
acagttaatcagtacacaggggaggtgaggactaaacgcgctgtgtccgagcaggacgac
tcctctcagaagttgcttatagaggtcaaggacgacggggaaccggttcagtccgccaca
gtcacggtgtccattctgctggaggacggcctccatgagcccatcttggacctccgacag
aaaacgatggagccgagcaagaaaaccgggagaatcaccctttatttgattctctctctg
gcctcggtgtccgtgctgtctctggtgacttttctcatcttagcggttaaatgcatcagg
agcagcagaagcagcggtagttgctgcatgacacggagcgactgtgataattacaagaac
cccaacagaaacctgcagattcagctcaacactgatgggcctataaagtacgtggaggtc
ctgggaggagacatgctgtctcagagtcagtccttcaggtcctgtatgtctccaatgtca
gagtacagtgatttcactttgattaagcccagcagcaccactgactttaaggaggtgatc
agtgttcttgatgcttctttacctgacagcacctggacctttgagagccagcaggtgagc
agataa
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