KEGG   Scomber scombrus (Atlantic mackerel): 133986166
Entry
133986166         CDS       T10651                                 
Symbol
cd40lg
Name
(RefSeq) CD40 ligand
  KO
K04389  tumor necrosis factor ligand superfamily member 6
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04010  MAPK signaling pathway
ssco04060  Cytokine-cytokine receptor interaction
ssco04068  FoxO signaling pathway
ssco04210  Apoptosis
ssco04217  Necroptosis
ssco05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    133986166 (cd40lg)
   04068 FoxO signaling pathway
    133986166 (cd40lg)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    133986166 (cd40lg)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    133986166 (cd40lg)
   04217 Necroptosis
    133986166 (cd40lg)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    133986166 (cd40lg)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssco04147]
    133986166 (cd40lg)
   04052 Cytokines and neuropeptides [BR:ssco04052]
    133986166 (cd40lg)
   04090 CD molecules [BR:ssco04090]
    133986166 (cd40lg)
Exosome [BR:ssco04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   133986166 (cd40lg)
Cytokines and neuropeptides [BR:ssco04052]
 Cytokines
  Tumor necrosis fators
   133986166 (cd40lg)
CD molecules [BR:ssco04090]
 Proteins
  133986166 (cd40lg)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 133986166
NCBI-ProteinID: XP_062281949
LinkDB
Position
9:13440042..13441737
AA seq 228 aa
MINTYQTSLPAPPVPPRLNRSHPVFMPAPLPSQGNSKTLIRFLVGAVLLHLLLSVGGFIY
LYHLHQMDKFHSAEGKAAFLSSEKQRTSYKPMARMIVQQKSELKSISGYLEWDIHHSDLR
AINYYRNSWLTIMEPGDYYVFSRVTFSKGNSEIPLVSMVKKRENETGAEMTVMQAFCSLE
THSGPRSCTATQGEVITLKKGNQLSVWVQDLSLVDYNEGATAFGMYRI
NT seq 687 nt   +upstreamnt  +downstreamnt
atgatcaacacttaccagaccagcctgcctgcaccaccggtgcctccgcgcctcaaccgt
tcccacccggttttcatgccagctccacttccatcacaaggcaacagcaagacactcatc
cgatttttggttggtgctgtgctgctgcatttattgctgtctgtcgggggattcatctac
ctgtaccaccttcatcaaatggacaaatttcactcagctgaaggaaaagctgcctttcta
tcatcagaaaaacagagaacttcctacaaacccatggcacgcatgatagttcagcagaaa
tcagaactgaaatccatatcgggttatctagagtgggacatacaccactcagatcttaga
gccatcaactactaccgcaacagttggttgacaattatggagcctggtgactactatgtc
ttctctagggtgaccttctcaaagggcaactctgagatcccactggtcagtatggtcaag
aagagagagaatgagacaggagctgagatgactgtgatgcaggccttctgcagcctggag
acccacagtgggcctcggtcgtgcacagccacacagggagaagtgatcacactgaagaaa
ggaaaccagctcagtgtctgggtacaagacctttcactggtggactacaatgaaggagcc
acagcctttgggatgtacagaatttag

DBGET integrated database retrieval system