Scomber scombrus (Atlantic mackerel): 133986305
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Entry
133986305 CDS
T10651
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Cell adhesion molecules [BR:
ssco04515
]
Cadherins
Protocadherins
133986305
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Gene cluster
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Other DBs
NCBI-GeneID:
133986305
NCBI-ProteinID:
XP_062282117
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Position
9:complement(17216270..17218753)
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AA seq
827 aa
AA seq
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MTKRMGYRDWRWQALWCHHFFLLWSTIDGQTRYSIPEELKQGAVVGNLAKDLGLGLSEIF
ERKLRVASEAGKQHFSVDAGKGELVVNDRIDREALCGQSASCVLPLQVVIEDPLQLHRIE
VEIRDINDNSPSFLSNQLSLKLAESAAVATRFPLESAMDPDVGSNSLKSYTLSKNECCSL
KIKEIEGGKTVPELVLEKPLDREKKAVHKILLTALDGGNPARSGTSQITISVLDINDNFP
VFEKNVYKVTLSEKSVKGAVIIKPKATDADEGLNGEIEFSFGTRTTDYVLSVFDINSLTG
EIVLKGELDYETTKSYDIDVTAKDKGSPEMEGHCRVQIDIIDFNDNFPEIVLTSQPKPVR
EDSPSGTVVALISARDLDSGDNGKVTLQLPKGSPFNLKPSFSNNYALVTSGHLDRERFSE
YNIKITATDSGSPPLSSKKSIPVSISDVNDNPPVFTQPSYNVYLKENGVPGSILYSVSAS
DLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFPIQVQAKDQ
GSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKPGHLVTKVTAVDAD
SGHNAWISYKLAEATDASLFTVNQYTGEVRTKRAVSEQDDSSQRLLIEVKDDGEPVQSAT
VTVSILLEDGLHEPILDLRQKTMEPSKKTGRITLYLILSLASVSVLSLVTFLILAVKCIR
SSRSSGSCCMTRSDCDNYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCMSPMS
EYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSRKSLGIV
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaatgggataccgagactggagatggcaggcgctttggtgtcatcatttc
tttctcttgtggagtacaatagacggacagactcgatacagcatcccagaagaactgaaa
cagggcgctgtagtaggaaatcttgccaaagatctgggtttgggactatcagagattttt
gaacgtaaattgcgtgtcgcctctgaggctggtaagcagcatttcagtgtggatgcgggg
aagggcgagctggtggtgaatgacagaatagacagagaggctttatgtggacaaagtgcc
agctgtgttctacctctgcaagtagttattgaggacccactacagttacaccgaattgag
gttgaaatacgagatattaatgacaattctccaagtttcctttcaaatcagttatctttg
aaattagccgaatcagcagcagttgccacacgctttcctttggagagcgcaatggacccc
gatgttggaagcaattcactcaaatcatatactcttagtaaaaatgagtgttgttctctt
aaaataaaagaaatagagggtggaaagaccgttcccgagcttgttttagaaaagcctctt
gaccgagagaaaaaagcagttcacaaaatattactaacagcgttagatggggggaatcca
gcaagatccggaacctcacaaataaccataagtgtgcttgacattaatgataacttccca
gtgtttgaaaaaaacgtttacaaagtcaccttgagtgaaaaaagtgtaaagggggctgtt
attatcaagcccaaagcaacagatgcagacgaaggtttaaatggtgaaattgaattctca
tttggcactcggacaacagattatgtattgtcagttttcgatattaactccttaaccggt
gaaatcgttcttaaaggggagttagattacgaaactactaagtcatatgacattgatgta
actgcaaaagataaaggcagccctgaaatggagggccactgtcgcgtacaaattgatatt
attgacttcaatgataattttccagaaattgtcctcacttctcagccgaagccagtacgc
gaagactcgcccagtggcaccgtagtggctttaatcagtgcgcgagatcttgactctgga
gataacggtaaagtgacattacagctccccaagggttctccttttaatctgaaaccctca
ttttctaataattacgcactggttaccagtggtcatttagaccgggagaggttctcagag
tataatattaagataacagccactgattcaggctctcctcctctgtccagtaagaaaagt
atacctgtcagcatatctgatgtgaatgataacccccctgtattcactcagccctcatat
aatgtgtatttaaaagagaatggggtaccaggctctatattgtactcagtatcagcatct
gacctggattttggtgaaaacgctaaaatttcctattctatactggactctaaagtgcag
gacgtttctgtctcctcttacgtttacattaactcagataacggcagcatctacagcatg
cactcgtttgactatgagaaactgaaggtgtttccgattcaggttcaggcaaaggaccag
ggctctccgtctctcagcagcaacgctactgtccatgtttttatcctggaccagaacgac
aatgcccccgctgttatttacccctcctccgctgccctgggctccctttctcatcagagg
atgccccgctctgctaaaccgggtcacctggtaactaaggtgacggccgtggacgctgac
tcgggccataacgcctggatctcctacaaactggcggaggccacagacgcctctctgttc
acagttaatcagtacacaggggaggtgaggactaaacgcgctgtgtccgagcaggacgac
tcctctcagaggctgcttatagaggtcaaggacgacggggaaccggttcagtccgccaca
gtcacggtgtccatcctgctggaggacggcctccatgagcccatcttggacctccgacag
aaaacgatggagccgagcaagaaaaccgggagaatcaccctttatttgattctctctctg
gcctcggtgtccgtgctgtctctggtgacttttctcatcttagcggttaaatgcatcagg
agcagcagaagcagcggtagttgctgcatgacacggagcgactgtgataattacaagaac
cccaacagaaacctgcagattcagctcaacactgatgggcctataaagtacgtggaggtc
ctgggaggagacatgttgtctcagagtcagtccttcaggtcctgtatgtctccaatgtca
gagtacagtgatttcactttgattaagcccagcagcaccactgactttaaggaggtgatc
agtgttcttgatgcttctttacctgacagcacctggacctttgagagccagcaggtgagc
agaaaatcactaggtattgtgtga
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