Scomber scombrus (Atlantic mackerel): 133986306
Help
Entry
133986306 CDS
T10651
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Cell adhesion molecules [BR:
ssco04515
]
Cadherins
Protocadherins
133986306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133986306
NCBI-ProteinID:
XP_062282118
LinkDB
All DBs
Position
9:complement(17219626..17222121)
Genome browser
AA seq
831 aa
AA seq
DB search
MTKRMGYRDWRWQALWWHNFFLLWSTIDGQTRYSIPEELKQGSVVGNLAKDLGLGLSDIF
DRKLRVDSEAGKQYFSVDAGKGELMVNDRIDREALCGQSASCLLPLQVVTENPLQLHRIE
IEIRDINDNFPVFSTEERSLKIAESTATGIRFPLETAQDLDVGSNSVKSYTLSKDECFSL
RMKDLSGDRKVPELVLEKSLDREKQSVHQLLLTALDGGNPVKSGTTKIIVTVLDNNDNVP
VFKRALYNVTVTENSVAGSVLVKVEATDADEGVNGEIEYAFAEHTPQSLLSIFHLHSGTG
EIFLVGQLDYESNAIHEIDITAKDKGVPVMEGHCRVQVVVVDINDNAPEIVLTSKPNPVR
EDAPKGTVVALIRARDLDSGDNGKVMLQLTKDIPFRLKPSFSNNYALITSGVLDRERFSE
YNIEITATDSGSPPLSSKKIIPVSISDVNDNPPVFTQPSYNVYLKENGVPGSILYSVSAS
DLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDQ
GSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKPGHLVTKVTAVDAD
SGHNAWISYKLADATDASLFTVNQYTGEVRTKRAVSEQDDSSQRLLIEVKDDGEPVQSAT
VTVSILLEDGLHEPILDLRQKTMEPSKKTGRITLYLILSLASVSVLSLVTFLILAVKCIR
SSRSSGSCCMTRSDCDNYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCMSPMS
EYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSREYRNNAYTDL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaatgggataccgagactggagatggcaggcgctttggtggcataatttc
tttctcttgtggagtacaatagacggacagactcgatacagcatcccagaggaactaaaa
cagggttctgtggtaggaaatcttgccaaagatctgggtttgggactatcagacattttt
gaccgtaaactgcgcgttgactctgaggctggtaagcagtatttcagtgtggatgcgggg
aagggcgagctgatggtgaacgacaggatagacagagaggcgttatgcggacaaagcgcc
agctgtttgttgcctttgcaggttgtaacagagaatccgctacagctccaccggatagaa
atagagatacgggacataaatgacaactttccggttttttcaacagaggagcgatcatta
aagatagcagaatctactgccacgggcatacgctttcctttagaaacagcacaagacctg
gacgttggtagtaattcagtaaaatcttacactctgagtaaagatgagtgttttagttta
agaatgaaagacctgtctggtgatcgaaaggttcctgaactagtactagagaaatcactt
gacagagagaaacaaagcgtacaccagttattattaacagctttagacggaggcaatcct
gtgaaaagtggaactaccaaaatcatagttacagttctcgacaacaacgacaacgtgcct
gttttcaaaagggcgctgtataatgttactgtgactgaaaatagtgtcgctggttctgta
ttagtaaaagttgaagcaacagacgcagatgagggtgttaacggagagattgaatatgct
tttgctgagcacacaccgcagtctctattgtctatatttcacttacattcgggtacaggt
gagattttcttagtaggacagttagattatgaaagcaatgcaatacatgaaattgatatt
acggcaaaagataaaggtgttcctgtgatggagggacactgtcgtgtgcaagtagtagta
gtagatattaatgacaatgccccagaaatcgttctcacttcaaaaccaaaccctgtacga
gaggacgcaccgaaaggcacagttgtagctcttatcagagcacgagaccttgactccggt
gataacggtaaagtgatgttacagctcacaaaagatattcccttccgtttgaaaccgtca
ttttctaataattatgcactaattaccagtggtgttttagaccgagagagattttcagag
tataatattgagataacagccactgattcaggctctcctcctctgtccagtaagaaaatt
atacctgtcagcatctctgacgtgaatgataaccctcctgtattcactcagccctcttat
aatgtgtatttaaaagagaatggggtaccaggctctatactgtactccgtatcagcatct
gacctggattttggtgaaaacgctaaaatctcttattctatactggactctaaagtgcag
gatgtttctgtctcctcttatgtttacattaactcagataacggcagcatctacagcatg
cactcgtttgactatgagaaactgaaggtgtttcagattcaggttcaggcaaaggaccag
ggctctccgtctctcagcagcaacgctactgtccatgtttttatcctggaccagaacgac
aatgcccccgctgttatttacccctcctccgctgccctgggctccctctctcatcagaga
atgccccgctccgctaaaccgggtcacctggtaactaaggtgacggccgtggacgctgac
tcgggccataacgcctggatctcctacaaactggcggatgccacagacgcctctctgttc
acagttaatcagtacacaggggaggtgaggactaaacgcgctgtgtccgagcaggacgac
tcctctcagaggctgcttatagaggtcaaggacgacggggaaccagtccagtccgccaca
gtcacggtgtccattctgctggaggacggcctccatgagcccatcttggacctccgacag
aaaacgatggagccgagcaagaaaaccgggagaatcaccctttatttgattctctctctg
gcctcggtgtccgtgctgtctctggtgacttttctcatcttagcggttaaatgcatcagg
agcagcagaagcagcggtagttgctgcatgacacggagcgactgtgataattacaagaac
cccaacagaaacctgcagattcagctcaacactgatgggcctataaagtacgtggaggtc
ctgggaggagacatgttgtcccagagtcagtccttcagatcctgtatgtctccaatgtca
gagtacagtgattttactttgattaagcccagcagcaccactgactttaaggaggtgatc
agtgttcttgatgcttctttacctgacagcacctggacctttgagagccagcaggtaagc
agagagtataggaacaatgcatatacagatttgtaa
DBGET
integrated database retrieval system
