Scomber scombrus (Atlantic mackerel): 133986307
Help
Entry
133986307 CDS
T10651
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Cell adhesion molecules [BR:
ssco04515
]
Cadherins
Protocadherins
133986307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133986307
NCBI-ProteinID:
XP_062282119
LinkDB
All DBs
Position
9:complement(17237200..17239779)
Genome browser
AA seq
826 aa
AA seq
DB search
MTKRMGYRDWRWQALWWHHVFLLWSTIDGQTRYSVPEELKQGSVVGNIAKDLGLGLSEIF
DRKLRVASEAGKQYFSVDAGKGELMVNDRIDREALCGQSTSCLLPLQVVIEDPLQLFRVE
VEIQDINDNAPKFPSNDITLEIAESMGLGVRFPLESAIDPDVGSNSLKSYTLSKDECFNI
RIKEVAGGRKVPELILAKLLDREKKSVHKLLLTALDGGNPARSGTSQIYITVLDSNDNVP
AFEKTLYKVSVAENAAEGALIIQTKATDMDDGRNGEIEYLFGAHTPDTILSLFSIDNISG
TISLKAKLDFESTANYEIDITAKDKGSPRMEGHCTVHVEVLDVNDNAPEIIFTSHPKPVR
EDSTSGTVVALLSARDLDSGNNGKVMLHLPKKSPFALKPSFSHNYALVTSGVLDRENVSV
YNIEITATDSGSPPLSSKKSIPVSITDVNDNPPVFTQPSYNVYLKENGVPGSILYSVSAS
DLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDL
GSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKPGHLVTKVTAVDAD
SGHNAWISYKLAEATDASLFTVNQYTGEVRTKRPVSEQDDSSQRLLIEVKDDGEPVQSAT
VTVSILLEDGLHEPILDLRQKTMEPSKKTGRITLYLILSLASVSVLSLVTFLILAVKCIR
SSRSSGSCCMTRSDCDNYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCMSPMS
EYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSKTKRRL
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaatgggataccgagactggagatggcaggcgctttggtggcatcatgtc
tttctcttgtggagtacaatagatggacagactcgatacagcgtcccagaagaactaaaa
cagggctctgtggtaggaaatattgccaaagatctggggttggggctatctgagattttt
gaccgtaagcttcgtgtcgcctctgaggctggtaagcagtatttcagtgtggatgcgggg
aagggcgagctgatggtgaatgacaggatagacagagaagctttatgcggacaaagcacc
agctgtttgttgcctttgcaggttgtaattgaggacccattgcagctttttcgtgttgag
gtagaaatacaagacattaacgataatgcacccaaattcccatcaaatgatatcacactg
gagattgcggaatctatgggtttaggggttcgttttccattagaaagcgccatcgatcca
gatgttggcagtaattcactaaagtcatacactctcagtaaagacgaatgttttaatatt
agaattaaagaagttgcaggtggaagaaaagttcctgaattgattttagcaaaactttta
gacagagagaaaaagtctgttcataagcttttattgacagctctagatggaggcaaccca
gcgagatctgggacctcccaaatatatattacagtccttgacagcaacgataatgttcca
gcttttgagaaaacattgtataaagtctctgttgctgaaaatgcagcagaaggtgcatta
ataatacaaacaaaagcgacagacatggacgatggtcgaaatggggaaatagaatatttg
tttggagctcatacaccagataccattttatctttatttagtattgacaatatatcggga
acaatatctttaaaagcaaaactagatttcgaatcaactgcaaattatgaaatagacata
actgcaaaagataaaggtagcccgagaatggagggccattgtactgtacatgttgaagtt
ttagatgttaacgacaatgctccagaaataatattcacctctcatccaaagccagtgcgt
gaagactcgactagtggcaccgtagtagctttgctcagtgcccgagaccttgactctggt
aataacggcaaagtgatgttacatcttcctaagaaatccccatttgccctaaaaccctcg
ttttctcataattacgcgctagttaccagtggtgttttggatcgagaaaatgtctctgta
tataacattgagataacagccactgattcaggctctcctccactgtccagtaagaaaagt
atacctgtcagcatcactgatgtgaatgataaccctcctgtattcactcagccctcctat
aatgtgtatttaaaagagaatggggtaccaggctctatactgtactcagtatcagcatct
gacctggattttggtgaaaacgctaaaatctcttactctatactggactctaaagtgcag
gacgtttctgtctcctcttatgtttacattaactcagataacggcagcatctacagcatg
cactcgtttgactatgagaaactgaaggtgtttcagattcaggttcaggcaaaggacctg
ggctctccgtctctcagcagcaacgctactgtccatgtttttatcctggaccagaacgac
aatgcccccgctgttatttacccctcctccgctgccctgggctccctctctcatcagagg
atgccccgctccgctaaaccgggtcacctggttactaaggtgacggccgtggacgctgac
tcgggccataacgcctggatctcctacaaactggcggaggccacagacgcctctctgttc
acagttaatcagtacacaggggaggtgaggactaaacgccccgtgtctgagcaggacgac
tcctctcagaggctgcttatagaggtcaaggacgacggggaaccggttcagtccgccaca
gtcacggtgtccatcctgctggaggacggcctccatgagcccatcttggacctccgacag
aaaacgatggagccgagcaagaaaaccgggagaatcaccctttatttgattctctctctg
gcctcggtgtccgtgctgtctctggtgacttttctcatcttagcggttaaatgcatcagg
agcagcagaagcagcggcagttgctgcatgacacggagcgactgtgataattacaagaac
cccaacagaaacctgcagattcagctcaacactgatgggcctataaagtacgtggaggtc
ctgggaggagacatgttgtctcagagtcagtccttcaggtcctgtatgtctccaatgtca
gagtatagtgatttcactttgattaagcccagcagcaccactgactttaaggaggtgatc
agtgttcttgatgcttctttacctgacagcacctggacctttgagagccagcaggtgagc
aaaacaaaacgcagactttag
DBGET
integrated database retrieval system
