Scomber scombrus (Atlantic mackerel): 133987417
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Entry
133987417 CDS
T10651
Symbol
ptpn11b
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 11b isoform X1
KO
K07293
tyrosine-protein phosphatase non-receptor type 11 [EC:
3.1.3.48
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04148
Efferocytosis
ssco04625
C-type lectin receptor signaling pathway
ssco04920
Adipocytokine signaling pathway
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133987417 (ptpn11b)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
133987417 (ptpn11b)
09152 Endocrine system
04920 Adipocytokine signaling pathway
133987417 (ptpn11b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133987417 (ptpn11b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssco01009
]
133987417 (ptpn11b)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
133987417 (ptpn11b)
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Non-receptor PTPs
133987417 (ptpn11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
SH2
SH2_1
PTP-SAK
Tc-R-P
DSPc
PTPlike_phytase
Y_phosphatase3
PTP-NADK
DUF5956
Motif
Other DBs
NCBI-GeneID:
133987417
NCBI-ProteinID:
XP_062282764
LinkDB
All DBs
Position
10:complement(7623000..7673287)
Genome browser
AA seq
595 aa
AA seq
DB search
MTSRRWFHPNITGIEAEQLLLTRGVHGSFLARPSKSNPGDFTLSVRRNDEVTHIKIQNSG
DYYDLYGGEKFATLAELVQYYTEQQDLLRERNGHVIELKYPLNCKDPTSERWYHGHLSGR
DAEKLLTDKGKAGSFLVRESQSKPGDFVLSVLTNEEKHENVDRKTKVTHVMIRYQQDGKY
DVGGGERFDTLADLVDHYKKNPMVEKSGIVVHLKQPFNATRINAANIENRVRELNKVADN
SEKPKQGFWEEFEVLQQQECKLLYPRKEGQKPENKSKNRYKNILPFDTTRVEITEADPDI
LGSDYINANYIRSMHEEGRHVQEGKVFIATQGCLQNTVIDFWKMVYQENTHVIVMTTKEM
ERGRNKCVRYWPDPHTTREFGKVLVKNVEEHSAQDYILRKLEVTRLDRKELPRYIWHYQY
LSWPDHGVPNEPGGVLWFLEEVNRTQSTIPDTGPIVVHCSAGIGRTGTIIVIDILIDIIN
RQGLDCDIDIPKTIQRVRQQRSGMVQTEAQYKFIYMAVQQYIDTAQKRLEEEQRNKMKER
EYSNIKYPQMTNSRSKPNMTSSRSSSVMTNDDSSSVYENINFKSPQTSFSSNTRR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgacatctcgcaggtggttccaccccaacatcaccggaatcgaggcagagcagctcctg
ttgacccggggcgtccacggcagtttcttggcccggcccagcaagagcaacccaggggat
ttcaccctctctgtcagacgtaacgatgaggtgacccacattaagatccagaactcaggt
gactactacgacctgtacggaggggagaagttcgccacgttggccgagctggtgcagtac
tacaccgagcaacaggatctcctgcgcgagaggaacggccatgtcatcgagctcaagtac
ccactcaactgcaaggaccccacatctgagagatggtaccacgggcacctctctgggcga
gatgcagagaagctgctcacagacaaaggcaaggccgggagcttcctggttcgggagagc
caaagtaaaccgggcgacttcgtcctctctgttctcaccaatgaggagaaacatgagaac
gtggaccgcaagaccaaggtcacccacgttatgatacgctaccagcaggacggtaaatac
gacgtgggcggtggagagaggtttgacaccctcgctgacctggtggatcactacaagaag
aaccccatggtagagaagagcggcatcgtagtgcacctcaaacagccctttaatgccacg
aggataaacgcagccaacatagagaaccgggtacgagagctcaacaaagtagcggacaat
tctgagaaaccaaaacaaggattctgggaagaatttgaggtacttcagcagcaggagtgc
aaactgctgtatccccggaaagaaggccagaagccagaaaacaagagtaaaaacagatac
aagaatatcctcccctttgacacaactcgggttgaaattacggaagcagatccagacatt
cttggttcagactacatcaatgccaactacatcagaagtatgcatgaagaggggcgccat
gtgcaggagggcaaggtcttcatcgccacccaagggtgcctacagaatacagtcatcgac
ttctggaagatggtgtaccaggagaatacacacgtcattgtcatgaccacgaaagagatg
gagcgaggaaggaacaaatgtgtccgttactggcctgacccgcacaccaccagggagttc
gggaaggtgctggtgaagaacgtggaggagcactcagcacaggactacatccttaggaag
ctggaggtgacccgtctggaccggaaggagctcccgaggtatatctggcactaccagtat
ctaagctggccggatcacggcgtgcccaatgagcccggtggtgtcctttggtttctagag
gaggtcaaccgcacccagagcaccattccagacactggacccattgttgttcactgcagc
gccggcatcgggaggacaggcactattatcgtcattgacatccttattgatattattaac
cgccaaggactggactgtgacattgacatccctaagaccatccagagggtacggcagcag
aggtcgggtatggtgcagacggaggcccagtataagttcatctacatggctgtgcagcag
tacatagacacagcccagaagagactggaggaggagcagaggaataagatgaaggagaga
gaatactccaatatcaaatatcctcagatgaccaactccaggtccaaacccaatatgaca
tcctcacgctcttcttctgtgatgacaaacgatgattcgtcgagtgtgtacgagaacata
aactttaaaagccctcagacgtcttttagcagtaacaccaggaggtaa
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