Scomber scombrus (Atlantic mackerel): 133988239
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Entry
133988239 CDS
T10651
Name
(RefSeq) vitamin D3 receptor A
KO
K08539
vitamin D3 receptor
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssco01009
]
133988239
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133988239
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssco03310
]
133988239
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133988239
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
133988239
Nuclear receptors [BR:
ssco03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
133988239
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
ArsA_ATPase
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
133988239
NCBI-ProteinID:
XP_062283798
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All DBs
Position
10:complement(6936358..7014986)
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AA seq
420 aa
AA seq
DB search
MEPMTVTTSVVGPDEFDRNAPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTC
PFNGSCTITKDNRRHCQACRLKRCIDIGMMKEFILTDEEVQRKKEMILKRKEEEAAREAM
RPRLNDEQARIISSLVEAHHKTYDASYSDFSRFRPPVREGPVTRSASRAASLHSLSDASS
DSFNHSPESVDTKMNFSNLLMMYQDGASSPDSSEEDQKLSMLPHLADLVSYSIQKVIGFA
KMIPGFRELTAEDQIALLKSSAIEIIMLRSNQSFSLEDMSWSCGGPDFKYCINDVTKAGH
TLELLEPLVKFQVGLKKLNLHEEEHVLLMAICLLSPDRPGVQDHARIEQLQDRLSEALQA
YIRVNHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggagcccatgacggtgacgacgtcggtggtcggaccggacgagttcgaccgcaacgcc
ccgcggatctgtggtgtgtgcggcgacaaggccactggcttccacttcaacgccatgacc
tgcgagggctgcaaggggttcttcagacgcagtatgaagcgtaaagcctccttcacctgc
ccatttaacggaagctgcaccatcaccaaggacaaccggcgtcactgccaggcctgtcgt
ctcaaacgctgcatcgacatcggcatgatgaaagagttcatcctgacagatgaggaagtt
cagagaaagaaagaaatgatattgaagaggaaggaggaggaggcagccagggaggcgatg
aggccgcggctgaatgatgagcaggctcgcatcatctccagcctggtggaagctcaccac
aagacctacgatgcctcctattctgacttctcccgcttcaggcctccagtgcgtgaaggc
ccagtaacacgcagtgccagcagagctgcctcccttcactctttgtctgatgcctcctct
gactcattcaaccactcacctgagtcggtggacaccaagatgaacttcagcaacctgtta
atgatgtaccaggacggcgctagtagtccagactccagtgaggaggaccaaaagctttcc
atgctgccccacctggctgacttggtttcctacagcattcagaaagtcataggctttgcc
aagatgatccctggcttcagagagctgacagcagaagatcagatcgccctgctgaagtcg
agcgccatcgagatcatcatgctgcgttccaaccagtcgttcagtctggaggacatgtcc
tggagctgcggaggacctgacttcaaatactgcatcaatgacgttacaaaggctggtcac
actttggagctgctggagccactggtgaagttccaggttggtctcaagaaactcaacctg
cacgaggaagaacacgtactgctcatggccatctgcctgctctccccagatcgtcccggc
gtccaagaccacgcccgcatcgagcagcttcaggaccgtctgtcggaggcgctgcaggcc
tacatccgagtcaaccatccgggcggacgcctcctctacgccaagatgatccagaagctg
gccgacctgcgcagcctgaacgaggagcactccaagcagtaccgctcgctctccttccag
ccggagcacagcatgcagctcaccccgctggtgctggaagtgttcggcagcgaggtgtca
tag
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